Contig 011542:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022K13Sequence566011542 (2)ref|NP_001268065.1|8e-31uncharacterized protein LOC100260747 [Vitis vinifera] gb|ACZ48681.1| Bcl-2-assoc731011542 (2)gb|KJB31531.1|1e-19hypothetical protein B456_005G194800 [Gossypium raimondii]

Alignment

This contig is upended


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rJMFF022K13-                                 ATTTTAAGAGAGATACATCATATCATATAAAACATGA
                      ____________________________________________________________
consensus                                    ATTTTAAGAGAGATACATCATATCATATAAAACATGA
 
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rJMFF022K13-          GTGTATATATAAGCATCGATCAAGGCCTCAAGGGGTATGCTTCTTCTTCATCTTCTTCCT
                      ____________________________________________________________
consensus             GTGTATATATAAGCATCGATCAAGGCCTCAAGGGGTATGCTTCTTCTTCATCTTCTTCCT
 
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rJMFF022K13-          TCTTAGCCTATCGCAGACGATAGATTTCTCGAGGTGCTCCACACGCTGCGTTAGCGCTTC
                      ____________________________________________________________
consensus             TCTTAGCCTATCGCAGACGATAGATTTCTCGAGGTGCTCCACACGCTGCGTTAGCGCTTC
 
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rJMFF022K13-          CAGCATTCTCGTCTGCGCTTCATTTCTCTCTGACATCTGTGCCATCAAGCTCATCATCTT
                      ____________________________________________________________
consensus             CAGCATTCTCGTCTGCGCTTCATTTCTCTCTGACATCTGTGCCATCAAGCTCATCATCTT
 
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rJMFF022K13-          TCGATTCTCCTCCATCATCCTCTCCAGCAATTCTCTGTTGTTTCTGTTGTTTTCATCTTC
                      ____________________________________________________________
consensus             TCGATTCTCCTCCATCATCCTCTCCAGCAATTCTCTGTTGTTTCTGTTGTTTTCATCTTC
 
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rJMFF022K13-          CCTGTTGCTAGTCTCTTCAATCTCCAGGCCGCTTCCATTTTTCTCCTCGGCTCCTTCATT
                      ____________________________________________________________
consensus             CCTGTTGCTAGTCTCTTCAATCTCCAGGCCGCTTCCATTTTTCTCCTCGGCTCCTTCATT
 
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rJMFF022K13-          CTCTGTCTTCGGATTTGTTACCTCTGAAATAAACCCTCCCATTGATTGTTCATCATCTTC
                      ____________________________________________________________
consensus             CTCTGTCTTCGGATTTGTTACCTCTGAAATAAACCCTCCCATTGATTGTTCATCATCTTC
 
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rJMFF022K13-          CAATTCGGATTTTTCAACGTTTCCGCAACCGTTAGCTTCTACTGGAGAATCGTTAGGTTC
                      ____________________________________________________________
consensus             CAATTCGGATTTTTCAACGTTTCCGCAACCGTTAGCTTCTACTGGAGAATCGTTAGGTTC
 
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rJMFF022K13-          TTCAACACCATCGCTATCAATTTGAGCAGTTTCAAGTTCACTCTCAGATGAATCGTCGAT
                      ____________________________________________________________
consensus             TTCAACACCATCGCTATCAATTTGAGCAGTTTCAAGTTCACTCTCAGATGAATCGTCGAT
 
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rJMFF022K13-          ACATGGTGTTTGATCAACGGATTCAGGTTGCTCAGGATCAGGAGAATCGCACTCCTTAGC
JMFF022K13+                                             GGATCAGGAGAATCGCACTCCTTAGC
                      ____________________________________________________________
consensus             ACATGGTGTTTGATCAACGGATTCAGGTTGCTCAGGATCAGGAGAATCGCACTCCTTAGC
 
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rJMFF022K13-          AGCTT-CAATGTCGCCATTATCCGTTACAGTTTGTTGATCGGAGTTGTTAACAATTGCGT
JMFF022K13+           AGCTTNCAATGTCGCCATTATCCGTTACAGTTTGTTGATCGGAGTTGTTAACAATTGCGT
                      ____________________________________________________________
consensus             AGCTTNCAATGTCGCCATTATCCGTTACAGTTTGTTGATCGGAGTTGTTAACAATTGCGT
 
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rJMFF022K13-          CAATTCTCTCTTGCAGAGCAATGGCCTTTCTGGTGACAGCCTTCCTGCAAACCCTAACTC
JMFF022K13+           CAATTCTCTCTTGCAGAGCAATGGCCTTTCTGGTGACAGCCTTCCTGCAAACCCTAACTC
                      ____________________________________________________________
consensus             CAATTCTCTCTTGCAGAGCAATGGCCTTTCTGGTGACAGCCTTCCTGCAAACCCTAACTC
 
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rJMFF022K13-          CCGAATCAACGCCGCGAACCGAATCCNATTTGAAG                         
JMFF022K13+           CCGAATCAACGCCGCGAACCGAATCCAATTTGAAGAGCAGAGACATGAGCATCTCGTTGA
                      ____________________________________________________________
consensus             CCGAATCAACGCCGCGAACCGAATCCAATTTGAAGAGCAGAGACATGAGCATCTCGTTGA
 
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JMFF022K13+           CGCGGATCCTCTCCCTCTCGTCTCTCCGCAACACCTCCACCCGTTTCGCTCTGCGAAACT
                      ____________________________________________________________
consensus             CGCGGATCCTCTCCCTCTCGTCTCTCCGCAACACCTCCACCCGTTTCGCTCTGCGAAACT
 
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JMFF022K13+           CTCCGCTCAATTTCATCCACCTCCCGCGCTACGGACATCACGCGGTTCATGCTTTTCCTC
                      ____________________________________________________________
consensus             CTCCGCTCAATTTCATCCACCTCCCGCGCTACGGACATCACGCGGTTCATGCTTTTCCTC
 
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JMFF022K13+           ACCAGAAATCCTCGAAACACCTTCTGGATCTTCAACGCAGCGGCGGCTCGGGTAGGCTCC
                      ____________________________________________________________
consensus             ACCAGAAATCCTCGAAACACCTTCTGGATCTTCAACGCAGCGGCGGCTCGGGTAGGCTCC
 
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JMFF022K13+           GGCCGTACGAAGTGGACCGGAATCTGAACGATCTTCGACTTCGGCGCTTCATCAACCGGC
                      ____________________________________________________________
consensus             GGCCGTACGAAGTGGACCGGAATCTGAACGATCTTCGACTTCGGCGCTTCATCAACCGGC
 
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JMFF022K13+           TTGTGTTGAAACGGATAGACAGGATAACGGGGGCGAGAGGGTCGGGACCAGTAGCTTCCG
                      ____________________________________________________________
consensus             TTGTGTTGAAACGGATAGACAGGATAACGGGGGCGAGAGGGTCGGGACCAGTAGCTTCCG
 
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JMFF022K13+           TAGAAGGGGCTCTCCATTGTTGTCGAATTTTCAGGCTTGGATTATCGCTTTCAATTCTCA
                      ____________________________________________________________
consensus             TAGAAGGGGCTCTCCATTGTTGTCGAATTTTCAGGCTTGGATTATCGCTTTCAATTCTCA