| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003K12 | Sequence | 581 | 011541 (22) | gb|KDP40469.1| | 3e-98 | hypothetical protein JCGZ_24468 [Jatropha curcas] | 668 | 011541 (22) | emb|CDP16983.1| | 6e-56 | unnamed protein product [Coffea canephora] |
| JMFF007B02 | Sequence | 513 | 011541 (22) | ref|XP_008389060.1| | 244 | PREDICTED: uncharacterized protein LOC103451437 [Malus domestica] | 689 | 011541 (22) | gb|KDP40469.1| | 2e-109 | hypothetical protein JCGZ_24468 [Jatropha curcas] |
| JMFF018A23 | Sequence | 546 | 011541 (22) | ref|XP_008389060.1| | 266 | PREDICTED: uncharacterized protein LOC103451437 [Malus domestica] | 794 | 011541 (22) | gb|KDP40469.1| | 2e-128 | hypothetical protein JCGZ_24468 [Jatropha curcas] |
| JMFF019J23 | Sequence | 546 | 011541 (22) | ref|XP_008389060.1| | 266 | PREDICTED: uncharacterized protein LOC103451437 [Malus domestica] | 718 | 011541 (22) | gb|KDP40469.1| | 5e-115 | hypothetical protein JCGZ_24468 [Jatropha curcas] |
| JMFF022D14 | Sequence | 327 | 011541 (22) | ref|XP_002310360.1| | 7e-42 | hypothetical protein POPTR_0007s15300g [Populus trichocarpa] gb|EEE90810.1| hypo | 289 | 011541 (22) | ref|XP_002310360.1| | 4e-42 | hypothetical protein POPTR_0007s15300g [Populus trichocarpa] gb|EEE90810.1| hypo |
| JMFF036L19 | Sequence | 541 | 011541 (22) | ref|XP_008389060.1| | 264 | PREDICTED: uncharacterized protein LOC103451437 [Malus domestica] | 722 | 011541 (22) | gb|KDP40469.1| | 3e-116 | hypothetical protein JCGZ_24468 [Jatropha curcas] |
| JMFF039K10 | Sequence | 579 | 011541 (22) | emb|CDP16983.1| | 1e-97 | unnamed protein product [Coffea canephora] | 610 | 011541 (22) | gb|KDP40469.1| | 2e-93 | hypothetical protein JCGZ_24468 [Jatropha curcas] |
| JMFF039L14 | Sequence | 121 | 011541 (22) | 709 | 011541 (22) | gb|KDP40469.1| | 3e-115 | hypothetical protein JCGZ_24468 [Jatropha curcas] | |||
| JMFF043H04 | Sequence | 630 | 023761 | 552 | 011541 (22) | gb|KDP40469.1| | 3e-78 | hypothetical protein JCGZ_24468 [Jatropha curcas] | |||
| JMSF019K20 | Sequence | 476 | 011541 (22) | ref|XP_008389060.1| | 250 | PREDICTED: uncharacterized protein LOC103451437 [Malus domestica] | 774 | 011541 (22) | ref|XP_006350934.1| | 311 | PREDICTED: uncharacterized protein LOC102596661 [Solanum tuberosum] |
| JMSF020K20 | Sequence | 515 | 011541 (22) | emb|CDP16983.1| | 2e-81 | unnamed protein product [Coffea canephora] | |||||
| JMSF047C18 | Sequence | 696 | 011541 (22) | emb|CDP16983.1| | 4e-121 | unnamed protein product [Coffea canephora] | 760 | 011541 (22) | gb|KDP40469.1| | 2e-126 | hypothetical protein JCGZ_24468 [Jatropha curcas] |
This contig is upended
. : . : . : . : . : . :
rJMFF003K12- ATTGACNAATAAATAGTAAACAGGACAGGCAAAATGGGACAGAGGGAGTA
____________________________________________________________
consensus ATTGACNAATAAATAGTAAACAGGACAGGCAAAATGGGACAGAGGGAGTA
. : . : . : . : . : . :
rJMFF003K12- TAATACAAAACAAAACAAAAACAAAAATAATAAAAATTAAAAAAAAATATCTATAATTGA
____________________________________________________________
consensus TAATACAAAACAAAACAAAAACAAAAATAATAAAAATTAAAAAAAAATATCTATAATTGA
. : . : . : . : . : . :
rJMFF003K12- AGTTGCATTCGAGAAGACGTGTTTAATTCCTTTTGCTCTAACGCATCCATATCCACAAAT
____________________________________________________________
consensus AGTTGCATTCGAGAAGACGTGTTTAATTCCTTTTGCTCTAACGCATCCATATCCACAAAT
. : . : . : . : . : . :
rJMFF003K12- GAATAACAACAAAAGTGAATACGTCATTCCCACCAATGAAATTTAGTTTTCTATATTTAG
____________________________________________________________
consensus GAATAACAACAAAAGTGAATACGTCATTCCCACCAATGAAATTTAGTTTTCTATATTTAG
. : . : . : . : . : . :
rJMFF003K12- CTTCTTTTTTTTGAAAGGAGTTTTCTGTATTTAACTATTCTCATGAGTCCCCTACTTTCT
JMFF036L19- GTATTTAACTATTCTCATGAGTCCCCTACTTTCT
JMFF018A23- GTATTTAACTATTCTCATGAGTCCCCTACTTTCT
JMSF020K20- TCT
JMSF019K20- TCT
JMFF019J23- GTATTTAACTATTCTCATGAGTCCCCTACTTTCT
____________________________________________________________
consensus CTTCTTTTTTTTGAAAGGAGTTTTCTGTATTTAACTATTCTCATGAGTCCCCTACTTTCT
. : . : . : . : . : . :
rJMFF003K12- GCAATTCACTTGCTCTTCACCATTCCGTCTTATCCCAAAATGCCGTCCTCACTCTCTACC
JMFF036L19- GCAATTCACTT-CTCTTCACCATTCCGTCTTATCCCAAAATGCCGTCCTCACTCTCTACC
JMFF018A23- GCAATTCACTTGCTCTTCACCATTCCGTCTTATCCCAAAATGCCGTCCTCACTCTCTACC
JMSF020K20- GCAATTCACTTTCTCTTCACCATTCCGTCTTATCCCAAAATGCCGTCCTCACTCTCTACC
JMFF039L14- GCAATTCACTTGCTCTTCACCATTCCGTCTTATCCCNAAATGCCGTCCTCACTCTCTACC
JMFF007B02- GCAATTCACTTGCTCTTCACCATTCCGTCTTATCCCAAAATGCCGTCCTCACTCTCTACC
JMSF019K20- GCAATTCACTTTCTCTTCACCATTCCGTCTTATCCCAAAATGCCGTCCTCACTCTCTACC
JMFF019J23- GCAATTCACTT-CTCTTCACCATTCCGTCTTATCCCAAAATGCCGTCCTCACTCTCTACC
JMFF039K10- AATTCACTTGCTCTTCACCATTCCGTCTTATCCCAAAATGCCGTCCTCACTCTCTACC
JMSF047C18- GCAATTCACTTTCTCTTCACCATTCCGTCTTATCCCAAAATGCCGTCCTCACTCTCTACC
____________________________________________________________
consensus GCAATTCACTTGCTCTTCACCATTCCGTCTTATCCCAAAATGCCGTCCTCACTCTCTACC
. : . : . : . : . : . :
rJMFF003K12- TCATCCGAGAAGAATGATTACCTCGCCGCCGTTCTCGGCGCTGCCCGCCCTTTCCTCCGA
JMFF036L19- TCATCCGAGAAGAATGATTACCTCGCCGCCGTTCTCGGCGCTGCCCGCCCTTTCCTCCGA
JMFF018A23- TCATCCGAGAAGAATGATTACCTCGCCGCCGTTCTCGGCGCTGCCCGCCCTTTCCTCCGA
JMSF020K20- TCATCCGATAAGAATGATTACTTCGCCGCAGTTCTCGGCGCTGCCCGCCCTTTCCTCCGA
JMFF039L14- TCATCCGAGAAGAATGATTACCTCGCCGCCGTTCTCGGNGCTGCCCGNCCTTTCCTCCGA
JMFF007B02- TCATCCGAGAAGAATGATTACCTCGCCGCCGTTCTCGGCGCTGCCCGCCCTTTCCTCCGA
JMSF019K20- TCATCCGATAAGAATGATTACTTCGCCGCAGTTCTCGGCGCTGCCCGCCCTTTCCTCCGA
JMFF019J23- TCATCCGAGAAGAATGATTACCTCGCCGCCGTTCTCGGCGCTGCCCGCCCTTTCCTCCGA
JMFF039K10- TCATCCGAGAAGAATGATTACCTCGCCGCCGTTCTCGGCGCTGCCCGCCCTTTCCTCCGA
JMSF047C18- TCATCCGATAAGAATGATTACTTCGCCGCAGTTCTCGGCGCTGCCCGCCCTTTCCTCCGA
____________________________________________________________
consensus TCATCCGAGAAGAATGATTACCTCGCCGCCGTTCTCGGCGCTGCCCGCCCTTTCCTCCGA
. : . : . : . : . : . :
rJMFF003K12- GGGGAGCTTGAGAACGTTGATGAGAAGCTACCCTCTCTAGTCGCCGTCCTGCGCTCCGTT
JMFF036L19- GGGGAGCTTGAGAACGTTGATGAGAAGCTACCCTCTCTAGTCGCCGTCCTGCGCTCCGTT
JMFF018A23- GGGGAGCTTGAGAACGTTGATGAGAAGCTACCCTCTCTAGTCGCCGTCCTGCGCTCCGTT
JMSF020K20- GGGGAGCTCGAGAACGTTGACGAGAAGCTACCCTCTCTTGTCGCCGTCCTGCGCTCCGTT
JMFF039L14- G
JMFF007B02- GGGGAGCTTGAGAACGTTGATGAGAAGCTACCCTCTCTAGTCGCCGTCCTGCGCTCCGTT
JMSF019K20- GGGGAGCTCGAGAACGTTGACGAGAAGCTACCCTCTCTTGTCGCCGTCCTGCGCTCCGTT
JMFF019J23- GGGGAGCTTGAGAACGTTGATGAGAAGCTACCCTCTCTAGTCGCCGTCCTGCGCTCCGTT
JMFF039K10- GGGGAGCTTGAGAACGTTGATGAGAAGCTACCCTCTCTAGTCGCCGTCCTGCGCTCCGTT
JMSF047C18- GGGGAGCTCGAGAACGTTGACGAGAAGCTACCCTCTCTTGTCGCCGTCCTGCGCTCCGTT
____________________________________________________________
consensus GGGGAGCTTGAGAACGTTGATGAGAAGCTACCCTCTCTAGTCGCCGTCCTGCGCTCCGTT
. : . : . : . : . : . :
rJMFF003K12- GGCGCCGGGGAATGCTGGCATAAGCACGGGAGTTTCCTCGAACACCTGATGGACATTTAC
JMFF036L19- GGCGCCGGGGAATGCTGGCATAAGCACGGGAGTTTCCTCGAACACCTGATGGACATTTAC
JMFF018A23- GGCGCCGGGGAATGCTGGCATAAGCACGGGAGTTTCCTCGAACACCTGATGGACATTTAC
JMSF020K20- GGCGCCGGGGAGTGCTGGCATAAGCACGGGAGTTTCCTCGAACACCTGGTGGACATTTAC
JMFF007B02- GGCGCCGGGGAATGCTGGCATAAGCACGGGAGTTTCCTCGAACACCTGATGGACATTTAC
JMSF019K20- GGCGCCGGGGAGTGCTGGCATAAGCACGGGAGTTTCCTCGAACACCTGGTGGACATTTAC
JMFF019J23- GGCGCCGGGGAATGCTGGCATAAGCACGGGAGTTTCCTCGAACACCTGATGGACATTTAC
JMFF039K10- GGCGCCGGGGAATGCTGGCATAAGCACGGGAGTTTCCTCGAACACCTGATGGACATTTAC
JMSF047C18- GGCGCCGGGGAGTGCTGGCATAAGCACGGGAGTTTCCTCGAACACCTGGTGGACATTTAC
____________________________________________________________
consensus GGCGCCGGGGAATGCTGGCATAAGCACGGGAGTTTCCTCGAACACCTGATGGACATTTAC
. : . : . : . : . : . :
rJMFF003K12- CGGATACTCAAGCTATGGAAGGCCCCGGATTCCGTCTGCCTCTGCGGCCTCTTCCACTCC
JMFF036L19- CGGATACTCAAGCTATGGAAGGCCCCGGATTCCGTCTGCCTCTGCGGCCTCTTCCACTCC
JMFF018A23- CGGATACTCAAGCTATGGAAGGCCCCGGATTCCGTCTGCCTCTGCGGCCTCTTCCACTCC
JMSF020K20- CGGATACTCAAGCTATGGAAGGCCCCGGATTCCGTCTGCCTCTGCGGCCTCTTCCACTCC
JMFF007B02- CGGATACTCAAGCTATGGAAGGCCCCGGATTCCGTCTGCCTCTGCGGCCTCTTCCACTCC
JMSF019K20- CGGATACTCAAGCTATGGAAGGCCCCGGATTCCGTCTGCCTCTGCGGCCTCTTCCACTCC
JMFF019J23- CGGATACTCAAGCTATGGAAGGCCCCGGATTCCGTCTGCCTCTGCGGCCTCTTCCACTCC
JMFF039K10- CGGATACTCAAGCTATGGAAGGCCCCGGATTCCGTCTGCCTCTGCGGCCTCTTCCACTCC
JMSF047C18- CGGATACTCAAGCTATGGAAGGCCCCGGATTCCGTCTGCCTCTGCGGCCTCTTCCACTCC
____________________________________________________________
consensus CGGATACTCAAGCTATGGAAGGCCCCGGATTCCGTCTGCCTCTGCGGCCTCTTCCACTCC
. : . : . : . : . : . :
rJMFF003K12- GCCTACTCTAACTCCTACGTCAACCTCGCCATCTTCGACCCCTCCACCGGNCGCGACACC
JMFF036L19- GCCTACTCTAACTCCTACGTCAACCTCGCCATCTTCGACCCCTCCACCGGCCGCGACACC
JMFF018A23- GCCTACTCTAACTCCTACGTCAACCTCGCCATCTTCGACCCCTCCACCGGCCGCGACACC
JMSF020K20- GCCTACTCTAACTCCTACGTCAACCTCGCCATCTTCGACCCCTCCACCGGNCGCGACACC
JMFF007B02- GCCTACTCTAACTCCTACGTCAACCTCGCCATCTTCGACCCCTCCACCGGCCGCGACACC
JMSF019K20- GCCTACTCTAACTCCTACGTCAACCTCGCCATCTTCGACCCCTCCACCGGCCGCGACACC
JMFF019J23- GCCTACTCTAACTCCTACGTCAACCTCGCCATCTTCGACCCCTCCACCGGCCGCGACACC
JMFF039K10- GCCTACTCTAACTCCTACGTCAACCTCGCCATCTTCGACCCCTCCACCGGCCGCGACACC
JMSF047C18- GCCTACTCTAACTCCTACGTCAACCTCGCCATCTTCGACCCCTCCACCGGCCGCGACACC
____________________________________________________________
consensus GCCTACTCTAACTCCTACGTCAACCTCGCCATCTTCGACCCCTCCACCGGCCGCGACACC
. : . : . : . : . : . :
rJMFF003K12- GTACGCGCCCACGTCGGA
JMFF036L19- GTACGCGCCCACGTCGGAGACGCCGCCGAGCGCCTGATTCATCTCTTCTGCGTCGTTCCC
JMFF018A23- GTACGCGCCCACGTCGGAGACGCCGCCGAGCGCCTGATTCATCTCTTCTGCGTCGTTCCC
JMSF020K20- GTACGCGCCCACGTCGGAGACGCCGCCGAGCACCTGATTCATCTCTTCTGCGTCGTTCCC
JMFF007B02- GTACGCGCCCACGTCGGAGACGCCGCCGAGCGCCTGATTCATCTCTTCTGCGNCGTTCCC
JMSF019K20- GTACGCGCCCACGTCGGAGACGCCGCCGAGCACCTGATTCATCTCTTCTGCGTCGTTCCC
JMFF019J23- GTACGCGCCCACGTCGGAGACGCCGCCGAGCGCCTGATTCATCTCTTCTGCGTCGTTCCC
JMFF039K10- GTACGCGCCCACGTCGGAGACGCCGCCGAGCGCCTGATTCATCTCTTCTGCGTCGTTCCC
JMSF047C18- GTACGCGCCCACGTCGGAGACGCCGCCGAGCACCTGATTCATCTCTTCTGCGTCGTTCCC
JMFF003K12+ TTCTGCGTCGTTCCC
____________________________________________________________
consensus GTACGCGCCCACGTCGGAGACGCCGCCGAGCGCCTGATTCATCTCTTCTGCGTCGTTCCC
. : . : . : . : . : . :
JMFF036L19- CGCCAGCCCCTCATCCACGACGACCTCCTG-TTCAAGTACACCGATTCGGAAATCACACA
JMFF018A23- CGCCAGCCCCTCATCCACGACGACCTCCTG-TTCAAGTACACCGATTCGGAAATCACACA
JMSF020K20- CGCCAGNCCCTCATCCACGACGACCTCCTG-TTCAAGTACACCGATTCGGAAATCACACA
JMFF007B02- CGCCAGCCCCTCATCCACGACGACCTCCTGTTTCAAGTACACCGATTCGGAAATCACACA
JMSF019K20- CGCCAGCCCCTCATCCACGACGACNTCCTG-TTCAAGTACACCGATTCGGAAA
JMFF019J23- CGCCAGCCCCTCATCCACGACGACCTCCTG-TTCAAGTACACCGATTCGGAAATCACACA
JMFF039K10- CGCCAGCCCCTCATCCACGACGACCTCCTG-TTCAAGTACACCGATTCGGAAATCACACA
JMSF047C18- CGCCAGCCCCTCATCCACGACGACCTCCTG-TTCAAGTACACCGATTCGGAAATCACACA
JMFF003K12+ CGCCAGCCCCTCATCCACGACGACCTCCTG-TTCAAGTACACCGATTCGGAAATCACACA
____________________________________________________________
consensus CGCCAGCCCCTCATCCACGACGACCTCCTG-TTCAAGTACACCGATTCGGAAATCACACA
. : . : . : . : . : . :
JMFF036L19- GCACCTCGCGCTCTCCCACGCCTCCCTGA
JMFF018A23- GCACCTCGCGCTCTCCCACGCCTCCCTGAAGAA
JMSF020K20- ACACCTCGCGCTCTCCCACGCCTCCCTGAAG
JMFF007B02- GCACCTCGCGCTCTCCCACGCCTCCCTGAAGAA
JMFF019J23- GCACCTCGCGCTCTCCCACGCCTCCCTGAAGAAC
JMFF039K10- GCACCTCGCGCTCTCCCACGCCTCCCTGAAGAACGCCAAGGAAAAGGGGGTGTTTAACGA
JMSF047C18- ACACCTCGCGCTCTCCCACGCCTCCCTGAAGAACGCCAAGGAAAAGGGGGTGTTTAACGA
JMFF003K12+ GCACCTCGCGCTCTCCCACGCCTCCCTGAAGAACGCCAAGGAAAAGGGGGTGTTTAACGA
____________________________________________________________
consensus GCACCTCGCGCTCTCCCACGCCTCCCTGAAGAACGCCAAGGAAAAGGGGGTGTTTAACGA
. : . : . : . : . : . :
JMFF039K10- GGACGAGACGTGGAGGAAGAAACTCCAGTCGGTCTTACCGGC
JMSF047C18- GGACGAGACGTGGAGGAAGAAACTCCAGTCGGTGTTACCGGCGAGCGGGATCACAGTGAA
JMFF003K12+ GGACGAGACGTGGAGGAAGAAACTCCAGTCGGTCTTACCGGCGAGCGGGATCACAGTGAA
rJMSF047C18+ TTACCGGCGAGCGGGATCACAGTGAA
rJMFF018A23+ TTACCGGCGAGCGGGATCACAGTGAA
rJMSF019K20+ TCACAGTGAA
____________________________________________________________
consensus GGACGAGACGTGGAGGAAGAAACTCCAGTCGGTCTTACCGGCGAGCGGGATCACAGTGAA
. : . : . : . : . : . :
JMSF047C18- GCACATCAAGACGGGCGAAAGCATCGCCATATCGAGGAGAATCGTCGCGATTTTCCTCCT
JMFF003K12+ GCACATCAAGACGGGCGAAAACATCGCCATATCGAGGAGAATCGTCGCGATTTTCCTCCT
rJMSF047C18+ GCACATCAAGACGGGCGAAAGCATCGCCATATCGAGGAGAATCGTCGCGATTTTCCTCCT
rJMFF019J23+ AGGAGAATCGTCGCGATTTTCTTCNT
rJMFF039L14+ AGGAGAATCGTCGCGAATTTCCTCCT
rJMFF036L19+ TCGAGGAGAATCGTCGCGATTTTCCTCCT
rJMFF018A23+ GCACATCAAGACGGGCGAAAACATCGCCATATCGAGGAGAATCGTCGCGATTTTCCTCCT
rJMSF019K20+ GCACATCAAGACGGGCGAAAGCATCGCCATATCGAGGAGAATCGTCGCGANTTTCCTCCT
____________________________________________________________
consensus GCACATCAAGACGGGCGAAAGCATCGCCATATCGAGGAGAATCGTCGCGATTTTCCTCCT
. : . : . : . : . : . :
JMSF047C18- AATGACCATGGCGGANTTCAGCGACCAGCTGTTCGG
JMFF003K12+ AATGACCATGGCGGATTTCAGCGACCAGCTGTTC-GGGTTTCAGGACGGGTTGTTCGAGA
rJMSF047C18+ AATGACCATGGCGGATTTCAGCGACCAGCTGTTC-GGGTTTCAGGACGGGTTGTTCGAGA
rJMFF019J23+ AATGACCATGGCGGATTTCAGCGACCAGCTGTTC-GGGTTTCAGGACGGGTTGTTCGAGA
rJMFF039L14+ AATGACCATGGCGGATTTCAGCGACCAGCTGTTC-GGGTTTCAGGACGGGTTGTTCGAGA
rJMFF036L19+ AATGACCATGGCGGATTTCAGCGACCAGCTGTTC-GGGTTTCAGGACGGGTTGTTCGAGA
rJMFF018A23+ AATGACCATGGCGGATTTCAGCGACCAGCTGTTC-GGGTTTCAGGACGGGTTGTTCGAGA
rJMFF007B02+ CCATGGCGGATTTCAGCGACCAGCTGTTC-GGGTTTCAGGACGGGTTGTTCGAGA
rJMSF019K20+ AATGACCATGGCGGATTTCAGCGACCAGCTGTTCTNGGTTTCAGGACGGGTTGTTCGAGA
____________________________________________________________
consensus AATGACCATGGCGGATTTCAGCGACCAGCTGTTC-GGGTTTCAGGACGGGTTGTTCGAGA
. : . : . : . : . : . :
JMFF003K12+ ACTCCAACGGCCGGCTCGAATTCTCCGGCAACGACGTGCAGTCAGGTTTATGGCCCGGCG
rJMSF047C18+ ACTCCAACGGCCGGCTCGAATTCTCCGGCAACGACGTGCAGTCAGGTTTATGGCCCGGCG
rJMFF039K10+ GGCTCGAATTCTCCGGCAACGACGTGCAGTCAGGTTTATGGCCCGGCG
rJMFF019J23+ ACTCCAACGGCCGGCTCGAATTCTCCGGCAACGACGTGCAGTCAGGTTTATGGCCCGGCG
rJMFF039L14+ ACTCCAACGGCCGGCTCGAATTCTCCGGCAACGACGTGCAGTCAGGTTTATGGCCCGGCG
rJMFF036L19+ ACTCCAACGGCCGGCTCGAATTCTCCGGCAACGACGTGCAGTCAGGTTTATGGCCCGGCG
rJMFF018A23+ ACTCCAACGGCCGGCTCGAATTCTCCGGCAACGACGTGCAGTCAGGTTTATGGCCCGGCG
rJMFF007B02+ ACTCCAACGGCCGGCTCGAATTCTCCGGCAACGACGTGCAGTCAGGTTTATGGCCCGGCG
rJMSF019K20+ ACTCCAACGGCCGGCTCGAATTCTCCGGCAACGACGTGCAGTCAGGTTTATGGCCCGGCG
____________________________________________________________
consensus ACTCCAACGGCCGGCTCGAATTCTCCGGCAACGACGTGCAGTCAGGTTTATGGCCCGGCG
. : . : . : . : . : . :
JMFF003K12+ ACGGAAAACCCGGCCTGTGGGTGAATTCAGTGTCACGAATGGGCGGAATCTACCAATTGA
rJMSF047C18+ ACGGAAAACCCGGCCTGTGGGTGAATTCAGTGTCACGAATGGGCGGAATCTACCAATTGA
rJMFF039K10+ ACGGAAAACCCGNCCTGTGGGTGAATTCAGTGTCACGAATGGGCGGAATCTACCAATTGA
rJMFF019J23+ ACGGAAAACCCGGCCTGTGGGTGAATTCAGTGTCACGAATGGGCGGAATCTACCAATTGA
rJMFF039L14+ ACGGAAAACCCGGCCTGTGGGTGAATTCAGTGTCACGAATGGGCGGAATCTACCAATTGA
rJMFF036L19+ ACGGAAAACCCGGCCTGTGGGTGAATTCAGTGTCACGAATGGGCGGAATCTACCAATTGA
rJMFF018A23+ ACGGAAAACCCGGCCTGTGGGTGAATTCAGTGTCACGAATGGGCGGAATCTACCAATTGA
rJMFF007B02+ ACGGAAAACCCGGCCTGTGGGTGAATTCAGTGTCACGAATGGGCGGAATCTACCAATTGA
rJMSF019K20+ ACGGAAAACCCGGCCTGTGGGTGAATTCAGTGTCACGAATGGGCGGAATCTACCAATTGA
rJMFF043H04+ CGAATGGGCGGAATCTACCAATTGA
____________________________________________________________
consensus ACGGAAAACCCGGCCTGTGGGTGAATTCAGTGTCACGAATGGGCGGAATCTACCAATTGA
. : . : . : . : . : . :
JMFF003K12+ TAGCCCGAGAAGAAGAGATTTACACGGAACAAAGGAGAAGAGAAACCGGAATATCGTTTG
rJMSF047C18+ TAGCCCGAGAAGAAGAGATTTACTCGGAACAAAGGAGAAGAGAAACCGGAATATCGTTTG
rJMFF039K10+ TAGCCCGAGAAGAAGAGATTTACACGGAACAAAGGAGAAGAGAAACCGGAATATCGTTTG
rJMFF019J23+ TAGCCCGAGAAGAAGAGATTTACACGGAACAAAGGAGAAGAGAAACCGGAATATCGTTTG
rJMFF039L14+ TAGCCCGAGAAGAAGAGATTTACACGGAACAAAGGAGAAGAGAAACCGGAATATCGTTTG
rJMFF036L19+ TAGCCCGAGAAGAAGAGATTTACACGGAACAAAGGAGAAGAGAAACCGGAATATCGTTTG
rJMFF018A23+ TAGCCCGAGAAGAAGAGATTTACACGGAACAAAGGAGAAGAGAAACCGGAATATCGTTTG
rJMFF007B02+ TAGCCCGAGAAGAAGAGATTTACACGGAACAAAGGAGAAGACAAACCGGAATATCGTTTG
rJMSF019K20+ TAGCCCGAGAAGAAGAGATTTACTCGGAACAAAGGAGAAGAGAAACCGGAATATCGTTTG
rJMFF043H04+ TAGCCCGAGAAGAAGAGATTTACACGGAACAAAGGAGAAGAGAAACCGGAATATCGTTTG
____________________________________________________________
consensus TAGCCCGAGAAGAAGAGATTTACACGGAACAAAGGAGAAGAGAAACCGGAATATCGTTTG
. : . : . : . : . : . :
JMFF003K12+ AATCGGAGAGAGACGAAGAAATCGAGCTTGTGATTCCACCGGTGTTCGATTTCTGCACCA
rJMSF047C18+ AATCGGAGAGAGACGAAGAAATCGAGCTTGTGATTCCACCGGTGTTCGATTTCTGCACCA
rJMFF039K10+ AATCGGAGAGAGACGAAGAAATCGAGCTTGTGATTCCACCGGTGTTCGATTTCTGCACCA
rJMFF019J23+ AATCGGAGAGAGACGAAGAAATCGAGCTTGTGATTCCACCGGTGTTCGATTTCTGCACCA
rJMFF039L14+ AATCGGAGAGAGACGAAGAAATCGAGCTTGTGATTCCACCGGTGTTCGATTTCTGCACCA
rJMFF036L19+ AATCGGAGAGAGACGAAGAAATCGAGCTTGTGATTCCACCGGTGTTCGATTTCTGCACCA
rJMFF018A23+ AATCGGAGAGAGACGAAGAAATCGAGCTTGTGATTCCACCGGTGTTCGATTTCTGCACCA
rJMFF007B02+ AATCGGAGAGAGACGAAGAAATCGAGCTTGTGATTCCACCGGTGTTCGATTTCTGCACCA
rJMSF019K20+ AATCGGAGAGAGACGAAGAAATCGAGCTTGTGATTCCACCGGTGTTCGATTTCTGCACCA
rJMFF043H04+ AATCGGAGAGAGACGAAGAAATCGAGCTTGTGATTCCACCGGTGTTCGATTTCTGCACCA
____________________________________________________________
consensus AATCGGAGAGAGACGAAGAAATCGAGCTTGTGATTCCACCGGTGTTCGATTTCTGCACCA
. : . : . : . : . : . :
JMFF003K12+ GAATTGTGGACGCCGGGGATCAGATATC
rJMSF047C18+ GAATTGTAGACGCCGGGGATCAGATATCGGGACGGGATCTATACTGGGAGGCAGTTTGTG
rJMFF039K10+ GAATTGTGGACGCCGGGGATCAGATATCGGGACGGGATCTATACTGGGAGGCAGTTTGTG
rJMFF019J23+ GAATTGTGGACGCCGGGGATCAGATATCGGGACGGGATCTATACTGGGAGGCAGTTTGTG
rJMFF039L14+ GAATTGTGGACGCCGGGGATCAGATATCGGGACGGGATCTATACTGGGAGGCAGTTTGTG
rJMFF036L19+ GAATTGTGGACGCCGGGGATCAGATATCGGGACGGGATCTATACTGGGAGGCAGTTTGTG
rJMFF018A23+ GAATTGTGGACGCCGGGGATCAGATATCGGGACGGGATCTATACTGGGAGGCAGTTTGTG
rJMFF007B02+ GAATTGTGGACGCCGGGGATCAGATATCGGGACGGGATCTATACTGGGAGGCAGTTTGTG
rJMSF019K20+ GAATTGTAGACGCCGGGGATCAGATATCGGGACGGGATCTATACTGGGAGGCAGTTTGTG
rJMFF043H04+ GAATTGTGGACGCCGGGGATCAGATATCGGGACGGGATCTATACTGGGAGGCAGTTTGTG
____________________________________________________________
consensus GAATTGTGGACGCCGGGGATCAGATATCGGGACGGGATCTATACTGGGAGGCAGTTTGTG
. : . : . : . : . : . :
rJMSF047C18+ AAGGGGCGGAGAAGGGAATGGATTGGGCGGAGGAGAGGCTGAAGAAGAGCATTGAGAAGA
rJMFF039K10+ AAGGGGCGAAGAAGGGAATGGATTGGGCGGAGGAGAGGCTGAGGAAGAGCATTGAGAAGA
rJMFF019J23+ AAGGGGCGAAGAAGGGAATGGATTGGGCGGAGGAGAGGCTGAGGAAGAGCATTGAGAAGA
rJMFF039L14+ AAGGGGCGAAGAAGGGAATGGATTGGGCGGAGGAGAGGCTGAGGAAGAGCATTGAGAAGA
rJMFF036L19+ AAGGGGCGAAGAAGGGAATGGATTGGGCGGAGGAGAGGCTGAGGAAGAGCATTGAGAAGA
rJMFF018A23+ AAGGGGCGAAGAAGGGAATGGATTGGGCGGAGGAGAGGCTGAGGAAGAGCATTGAGAAGA
rJMFF022D14+ AGAGGCTGAGGAAGAGCATTGAGAAGA
rJMFF007B02+ AAGGGGCGAAGAAGGGAATGGATTGGGCGGAGGAGAGGCTGAGGAAGAGCATTGAGAAGA
rJMSF019K20+ AAGGGGCGAAGAAGGGAATGGATTGGGCGGAGGAGAGGCTGAAGAAGAGCATTGAGAAGA
rJMFF043H04+ AAGGGGCGAAGAAGGGAATGGATTGGGCGGAGGAGAGGCTGAGGAAGAGCATTGAGAAGA
JMFF022D14- AGAGGCTGAGGAAGAGCATTGAGAAGA
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consensus AAGGGGCGAAGAAGGGAATGGATTGGGCGGAGGAGAGGCTGAGGAAGAGCATTGAGAAGA
. : . : . : . : . : . :
rJMSF047C18+ ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGGGCCAGGGGAGAT
rJMFF039K10+ ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGGGCCAGGGGAGAT
rJMFF019J23+ ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGGGCCAGGGGAGAT
rJMFF039L14+ ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGGGCCAGGGGAGAT
rJMFF036L19+ ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGGGCCAGGGGAGAT
rJMFF018A23+ ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGGGCCAGGGGAGAT
rJMFF022D14+ ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGGGCCAGGGGAGAT
rJMFF007B02+ ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGGGCCAGGGGAGAT
rJMSF019K20+ ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGAGCCAGGGGAGAT
rJMFF043H04+ ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGGGCCAGGGGAGAT
JMFF022D14- ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGGGCCAGGGGAGAT
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consensus ACCCATTTGTGGGTGAGGCCCATGTAGTATTGGGCCAGATTTATTTGGGCCAGGGGAGAT
. : . : . : . : . : . :
rJMSF047C18+ TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
rJMFF039K10+ TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
rJMFF019J23+ TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
rJMFF039L14+ TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
rJMFF036L19+ TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
rJMFF018A23+ TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
rJMFF022D14+ TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
rJMFF007B02+ TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
rJMSF019K20+ TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
rJMFF043H04+ TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
JMFF022D14- TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
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consensus TTGAGGAGGGGAAGAAGGAGGCTGAAAATGGGCTGACTCTCATATTGGAGTGGGGGAGCC
. : . : . : . : . : . :
rJMSF047C18+ CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
rJMFF039K10+ CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
rJMFF019J23+ CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
rJMFF039L14+ CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
rJMFF036L19+ CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
rJMFF018A23+ CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
rJMFF022D14+ CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
rJMFF007B02+ CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
rJMSF019K20+ CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
rJMFF043H04+ CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
JMFF022D14- CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
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consensus CATGGGATAAGAGGATGTCTTGGGAGGGTTGGGTTTCTTGGGCCAGAGTGTTGGTCATGA
. : . : . : . : . : . :
rJMSF047C18+ AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCC
rJMFF039K10+ AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCCTTGTTA
rJMFF019J23+ AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCCTTGTTA
rJMFF039L14+ AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCCTTGTTA
rJMFF036L19+ AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCCTTGTTA
rJMFF018A23+ AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCCTTTTTA
rJMFF022D14+ AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCCTTGTTA
rJMFF007B02+ AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCCTTGTTA
rJMSF019K20+ AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCCTTGTTA
rJMFF043H04+ AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCCTTGTTA
JMFF022D14- AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCCTTGTTA
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consensus AGGCCCAACAAAAGTCTTGGCCGCAAAATGCTTGGGGCATCCTTAACTTGGGCCTTGTTA
. : . : . : . : . : . :
rJMFF039K10+ GGTAGTATGAGTAATATGCTCT
rJMFF019J23+ GGTAGTATGAGTAATATGCTCTTGTA
rJMFF039L14+ GGTAGTATGAGTAATATGCTCT
rJMFF036L19+ GGTAGTATGAGTAATATGCTCTTGTATGAATAAA
rJMFF018A23+ GGTAGTATGAGTAATATGCTCTTGTATGAATAAAT
rJMFF022D14+ GGTAGTATGAGTAATATGCTCT
rJMFF007B02+ GGTAGTATGAGTAATATGCTCTTGTATGAATAAAT
rJMSF019K20+ GGTAGCATGAGTAATATGCTCTTGTATGAATAAATTACTCCTTT
rJMFF043H04+ GGTAGTATGAGTAATATGCTCTTGTATGAATAAATTACTCCTTT
JMFF022D14- GGTAGTATGAGTAATATGCTCTTGTATGAATAAATTACTCCTTTTGGACCAAAAAAAAAA
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consensus GGTAGTATGAGTAATATGCTCTTGTATGAATAAATTACTCCTTTTGGACCAAAAAAAAAA