Contig 011539:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021F06Sequence538011539 (2)emb|CDP05900.1|4e-80unnamed protein product [Coffea canephora]674004011 (2)ref|XP_007133428.1|6e-60hypothetical protein PHAVU_011G1777000g, partial [Phaseolus vulgaris] gb|ESW0542
JMSF031M01Sequence626011539 (2)ref|XP_009616873.1|2e-101PREDICTED: nucleolar GTP-binding protein 2 [Nicotiana tomentosiformis]675004011 (2)ref|XP_007133428.1|6e-67hypothetical protein PHAVU_011G1777000g, partial [Phaseolus vulgaris] gb|ESW0542

Alignment

This contig is upended


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JMSF031M01+                    CTGGGTTGCTTGCACCAAACTTCTCCTCAAAAGCATCTTGAGAAACATCAG
                      ____________________________________________________________
consensus                      CTGGGTTGCTTGCACCAAACTTCTCCTCAAAAGCATCTTGAGAAACATCAG
 
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JMSF031M01+           CTTTCTTTGCAAGCGACTCATAATCTGATGCCATAAGCTTTGGGCGTTTCCTCTTCCTTT
                      ____________________________________________________________
consensus             CTTTCTTTGCAAGCGACTCATAATCTGATGCCATAAGCTTTGGGCGTTTCCTCTTCCTTT
 
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JMSF031M01+           TAGGACCAAAGGCATCAGCAAAAGGCTCGGTGTCAAGCAGGTGAGCTCTTGCTTGCTTTT
JMFF021F06+             GGACCAAAGGCATCAGCAAAAGGCTCGGTGTCAAGCAGGTGAGCTCTTGCTTGCTTTT
                      ____________________________________________________________
consensus             TAGGACCAAAGGCATCAGCAAAAGGCTCGGTGTCAAGCAGGTGAGCTCTTGCTTGCTTTT
 
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JMSF031M01+           GATGATCATTTAAAAGAGACAATGGCAATTTTCTGTCCTTCAAAATTACATTGTAGCTAC
JMFF021F06+           GATGATCATTTAAAAGAGACAATGGCAATTTTCTGTCCTTCAAAATTACATTGTAGCTAC
                      ____________________________________________________________
consensus             GATGATCATTTAAAAGAGACAATGGCAATTTTCTGTCCTTCAAAATTACATTGTAGCTAC
 
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JMSF031M01+           TGGACATCCGACTTTGTAGCTCTTCACGGAAGAATTCTAGCTCTTTCTGATTAACTACTC
JMFF021F06+           TGGACATCCGACTTTGTAGCTCTTCACGGAAGAATTCTAGCTCTTTCTGATTAACTACTC
                      ____________________________________________________________
consensus             TGGACATCCGACTTTGTAGCTCTTCACGGAAGAATTCTAGCTCTTTCTGATTAACTACTC
 
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JMSF031M01+           GTGTATTGCCGAACCATCGGCGATCGGGTTGAATCCGAGTGGAGGGTAGCTCCTTGGATT
JMFF021F06+           GTGTATTGCCGAACCATCGGCGATCGGGTTGAATCCGAGTGGAGGGTAGCTCCTTGGATT
                      ____________________________________________________________
consensus             GTGTATTGCCGAACCATCGGCGATCGGGTTGAATCCGAGTGGAGGGTAGCTCCTTGGATT
 
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JMSF031M01+           GCAAGTCGTGTTTTACGACCTTTCCCCTAGTATCACGCTTAGGTCTCGTATTGTACATCT
JMFF021F06+           GCAAGTCGTGTTTTACGACCTTTCCCCTAGTATCACGCTTAGGTCTCGTATTGTACATCT
                      ____________________________________________________________
consensus             GCAAGTCGTGTTTTACGACCTTTCCCCTAGTATCACGCTTAGGTCTCGTATTGTACATCT
 
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JMSF031M01+           TAAGCCGCCGCACAGTGGCGGCGCTACGGCCGCCTTTACTTCCGCTGCCATCTCTATTGC
JMFF021F06+           TAAGCCGCCGCACAGTGGCGGCGCTACGGCCGCCTTTACTTCCGCTGCCATCTCTATTGC
                      ____________________________________________________________
consensus             TAAGCCGCCGCACAGTGGCGGCGCTACGGCCGCCTTTACTTCCGCTGCCATCTCTATTGC
 
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JMSF031M01+           TATCAAGGGAATGCTTAGGCTTTCCGGATACGTTCACCGACTTCTCATTCTTCTTCGCCA
JMFF021F06+           TATCAAGGGAATGCTTAGGCTTTCCGGATACGTTCACCGACTTCTCATTCTTCTTCGCCA
                      ____________________________________________________________
consensus             TATCAAGGGAATGCTTAGGCTTTCCGGATACGTTCACCGACTTCTCATTCTTCTTCGCCA
 
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JMSF031M01+           TGGTTGTATTAGTCTATGATGCTTGGACAAAATAATAGGGGTTTGGAGGCGGGAGAGAAA
JMFF021F06+           TGGTTGTATTAGTCTATGATGCTTGGACAAAATAATAGGGGTTTGGAGGCGGGAGAGAAA
                      ____________________________________________________________
consensus             TGGTTGTATTAGTCTATGATGCTTGGACAAAATAATAGGGGTTTGGAGGCGGGAGAGAAA
 
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JMSF031M01+           CCCTAACAGATAGAGAAAGAAAGATATGGAGGGT                          
JMFF021F06+           CCCTAACAGATAGAGAAAGAAAGATATGGAGGGTGTGTTTGCCTGTTGGGTTCACCGCTC
                      ____________________________________________________________
consensus             CCCTAACAGATAGAGAAAGAAAGATATGGAGGGTGTGTTTGCCTGTTGGGTTCACCGCTC