Contig 011537:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021B12Sequence499011537 (4)gb|KHF98967.1|3e-77Homeobox prospero [Gossypium arboreum]686011537 (4)ref|XP_010316261.1|204PREDICTED: uncharacterized protein LOC101260389 [Solanum lycopersicum]
JMFF043G07Sequence642011537 (4)gb|KHF98967.1|3e-81Homeobox prospero [Gossypium arboreum]
JMFN012J12Sequence439011537 (4)ref|XP_010316261.1|162PREDICTED: uncharacterized protein LOC101260389 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF021B12- AAATTTGAACCCCAAACTTAATATCCAATCACCCGAGAAGTTTGACCCCGAA
                      ____________________________________________________________
consensus AAATTTGAACCCCAAACTTAATATCCAATCACCCGAGAAGTTTGACCCCGAA
 
. : . : . : . : . : . :
rJMFF021B12- CTTAAAAGCCAATCACCCAGGTGGAAGAGGTAAATCGCAAGAAGTGTATCAACGGCCTAC
                      ____________________________________________________________
consensus CTTAAAAGCCAATCACCCAGGTGGAAGAGGTAAATCGCAAGAAGTGTATCAACGGCCTAC
 
. : . : . : . : . : . :
JMFN012J12+ AAAGCAAACCTCTAAACTTATTTA
rJMFF021B12- AGACCTCCAAATGCTTGTATACTAATGCTTAAAGCTAAAGCAAACCTCTAAACTTATTTA
                      ____________________________________________________________
consensus AGACCTCCAAATGCTTGTATACTAATGCTTAAAGCTAAAGCAAACCTCTAAACTTATTTA
 
. : . : . : . : . : . :
JMFN012J12+ TAAATGCAAGTACTTCCAAATACATGACACTATTTATCATCAACCACAAAATAAACAAAC
rJMFF021B12- TAAATGCAAGTACTTCCAAATACATGACACTATTTATCATCAACCACAAAATAAACAAAC
JMFF043G07+ TTCCAAATACATGACACTATTTATCATCAACCACAAAATAAACAAAC
                      ____________________________________________________________
consensus TAAATGCAAGTACTTCCAAATACATGACACTATTTATCATCAACCACAAAATAAACAAAC
 
. : . : . : . : . : . :
JMFN012J12+ TTGAGAAGGGAAGATTACTCAGAAACAGTTAGAATTTATATATATAAACTATAGCAAATT
rJMFF021B12- TTGAGAAGGGAAGATTACTCAGAAACAGCTAGAATTTATATATATAAACTATAGCAAATT
JMFF043G07+ TGNAGAAGGGAAGATTACTCAGAAACAGCTAGAATTTATATATATAAACTATAGCAAATT
                      ____________________________________________________________
consensus TTGAGAAGGGAAGATTACTCAGAAACAGCTAGAATTTATATATATAAACTATAGCAAATT
 
. : . : . : . : . : . :
JMFN012J12+ ATTAGATGCACCTCAGATCATTCTACATCAAACCCTTTCTCCTGGAGTTCAGAGATGACT
rJMFF021B12- ATTAGATGCACCTCAGATCATTCTACATCAAACCCTTTCTCCTGGAGTTCAGAGATGACT
JMFF043G07+ ATTAGATGCACCTCAGATCATTCTACATCAAACCCTTTCTCCTGGAGTTCAGAGATGACT
JMFF021B12+ CTGGAGTTCAGAGATGACT
                      ____________________________________________________________
consensus ATTAGATGCACCTCAGATCATTCTACATCAAACCCTTTCTCCTGGAGTTCAGAGATGACT
 
. : . : . : . : . : . :
JMFN012J12+ TCATTCCTCATCCTCATCCACAGCTTGTGGGCTTCCAGCTCTACCTTCTCATCCTGCAAT
rJMFF021B12- TCATTCCTCATCCTCATCCACAGCTTGTGGGCTTCCAGCTCTACCTTCTCATCCTGCAAT
JMFF043G07+ TCATTCCTCATCCTCATCCACAGCTTGTGGGCTTCCAGCTCTACCTTCTCATCCTGCAAT
JMFF021B12+ TCATTCCTCATCCTCATCCACAGCTTGTGGGCTTCCAGCTCTACCTTCTCATCCTGCAAT
                      ____________________________________________________________
consensus TCATTCCTCATCCTCATCCACAGCTTGTGGGCTTCCAGCTCTACCTTCTCATCCTGCAAT
 
. : . : . : . : . : . :
JMFN012J12+ ATTTTCTGATAATTATAAGGATCTTTATCATAATCGATAAATCCCTTGGGCCCGATGGTT
rJMFF021B12- ATTTTCTGATAATTATAAGGATCTTTATCATAATCGATAAATCCCTTGGGCCCGATGGTT
JMFF043G07+ ATTTTCTGATAATTATAAGGATCTTTATCATAATCGATAAATCCCTTGGGCCCGATGGTT
JMFF021B12+ ATTTTCTGATAATTATAAGGATCTTTATCATAATCGATAAATCCCTTGGGCCCGATGGTT
                      ____________________________________________________________
consensus ATTTTCTGATAATTATAAGGATCTTTATCATAATCGATAAATCCCTTGGGCCCGATGGTT
 
. : . : . : . : . : . :
JMFN012J12+ GTACCAATCATCCCTCCCTTTGCAATGAACTCTTCCATGGCTTCCTCATCGCCCGGATAC
rJMFF021B12- GTACCAATCATCCCTCCCTTTGCAATGAACTCTTCCATGGCTTCCTCATCGCCCGGATAC
JMFF043G07+ GTACCAATCATCCCTCCCTTTGCAATGAACTCTTCCATGGCTTCCTCATCGCCCGGATAC
JMFF021B12+ GTACCAATCATCCCTCCCTTTGCAATGAACTCTTCCATGGCTTCCTCATCGCCCGGATAC
                      ____________________________________________________________
consensus GTACCAATCATCCCTCCCTTTGCAATGAACTCTTCCATGGCTTCCTCATCGCCCGGATAC
 
. : . : . : . : . : . :
JMFN012J12+ GGAAACTTCCGGCGCTCATACAGGTGCGCCAGCTCTTTCTCTTCCTTGGGCTTAA
rJMFF021B12- GGAAACTTCCGGCGCTCATACAGGTGCGCCAGCTCTTTCTCTTCCTTGGGCTTAACTTTC
JMFF043G07+ GGAAACTTCCGGCGCTCATACAGGTGCGCCAGCTCTTTCTCTTCCTTGGGCTTAACTTTC
JMFF021B12+ GGAAACTTCCGGCGCTCATACAGGTGCGCCAGCTCTTTCTCTTCCTTGGGCTTAACTTTC
                      ____________________________________________________________
consensus GGAAACTTCCGGCGCTCATACAGGTGCGCCAGCTCTTTCTCTTCCTTGGGCTTAACTTTC
 
. : . : . : . : . : . :
rJMFF021B12- AGCGTCCACCACCCCAATGGAGAAGTCTCATTATACCACCATGCCAAGCCGGCCACTGTG
JMFF043G07+ AGCGTCCACCACCCCAATGGAGAAGTCTCATTATACCACCATGCCAAGCCGGCCACTGTG
JMFF021B12+ AGCGTCCACCACCCCAATGGAGAAGTCTCATTATACCACCATGCCAAGCCGGCCACTGTG
                      ____________________________________________________________
consensus AGCGTCCACCACCCCAATGGAGAAGTCTCATTATACCACCATGCCAAGCCGGCCACTGTG
 
. : . : . : . : . : . :
rJMFF021B12- TAGCAGATGAGCAATGCCCTGGTCCATTGATACC
JMFF043G07+ TAGCAGATGAGCAATGCCCTGGTCCATTGATACCAGAAAAAATGGTCCTCCTTTCCTACC
JMFF021B12+ TAGCAGATGAGCAATGCCCTGGTCCATTGATACCAGAAAAAATGGTCCTCCTTTCCTACC
                      ____________________________________________________________
consensus TAGCAGATGAGCAATGCCCTGGTCCATTGATACCAGAAAAAATGGTCCTCCTTTCCTACC
 
. : . : . : . : . : . :
JMFF043G07+ CCCGATTTCCTCATGAATCTCTCAGTACTGAATGATTTCAGCATCGCAAAGCCTGTTTTG
JMFF021B12+ CCCGATTTCCTCATGAATCTCTCAGTACTGAATGATTTCAGCATCGCAAAGCCTGTTTTG
                      ____________________________________________________________
consensus CCCGATTTCCTCATGAATCTCTCAGTACTGAATGATTTCAGCATCGCAAAGCCTGTTTTG
 
. : . : . : . : . : . :
JMFF043G07+ GCATCTTGAAATCGCTTGCGAACCATTGCAACGACAGGAGATTTCTTGGTGAATT
JMFF021B12+ GCATCTTGAAATCGCTTGCGAACCATTGCAACGACAGGAGATTTCTTGGTGAATTGAGAT
                      ____________________________________________________________
consensus GCATCTTGAAATCGCTTGCGAACCATTGCAACGACAGGAGATTTCTTGGTGAATTGAGAT