Contig 011536:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005D09Sequence476011536 (3)ref|XP_009805042.1|5e-57PREDICTED: protein notum homolog [Nicotiana sylvestris]632012228 (3)gb|EYU35369.1|3e-87hypothetical protein MIMGU_mgv1a0197532mg, partial [Erythranthe guttata]
JMFF006H13Sequence542011536 (3)ref|XP_009805042.1|1e-67PREDICTED: protein notum homolog [Nicotiana sylvestris]609012228 (3)gb|EYU35369.1|2e-87hypothetical protein MIMGU_mgv1a0197532mg, partial [Erythranthe guttata]
JMFF020N13Sequence414011536 (3)ref|XP_009805042.1|2e-24PREDICTED: protein notum homolog [Nicotiana sylvestris]627012228 (3)gb|EYU35369.1|3e-87hypothetical protein MIMGU_mgv1a0197532mg, partial [Erythranthe guttata]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006H13+                                                     CGTCCATTGCTGCTTCAT
                      ____________________________________________________________
consensus                                                       CGTCCATTGCTGCTTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006H13+           ATATGCGTTGCCCTNTAAACTGCAGCTGTGCAGCCTGATTTTCGCTATCTCCTGAGAATG
JMFF005D09+                                                           CTCCTGAGAATG
                      ____________________________________________________________
consensus             ATATGCGTTGCCCTNTAAACTGCAGCTGTGCAGCCTGATTTTCGCTATCTCCTGAGAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006H13+           ATGCACCATCACAGTAGCGAACTTTAATTCTATTCCAATTGTAAAAATCTGGATTCTCCT
JMFF005D09+           ATGCACCATCACAGTAGCGAACTTTAATTCTATTCCAATTGTAAAAATCTGGATTCTCCT
                      ____________________________________________________________
consensus             ATGCACCATCACAGTAGCGAACTTTAATTCTATTCCAATTGTAAAAATCTGGATTCTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006H13+           GCCTTATTGCTCAAAATTCCGGTAAATGGAAGATTCTTTTCCATGAATTTCGATGACCCA
JMFF005D09+           GCCTTATTGCTCAAAATTCCGGTAAATGGAAGATTCTTTTCCATGAATTTCGATGACCCA
JMFF020N13+                 TTGCTCAAAATTCCGGTAAATGGAAGATTNTTTTCCATGAATTTCGATGACCCA
                      ____________________________________________________________
consensus             GCCTTATTGCTCAAAATTCCGGTAAATGGAAGATTCTTTTCCATGAATTTCGATGACCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006H13+           CGCCGCGTAGTTTTGCGGTAAACACATGATCTAATGGTGTTACACCATCCACCACCCTCC
JMFF005D09+           CGCCGCGTAGTTTTGCGGTAAACACATGATCTAATGGTGTTACACCATCCACCACCCTCC
JMFF020N13+           CGCCGCGTAGTTTTGCGGTAAACACATGATGTAATGGTGTTACACCATCCACCACCNTNC
                      ____________________________________________________________
consensus             CGCCGCGTAGTTTTGCGGTAAACACATGATCTAATGGTGTTACACCATCCACCACCCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006H13+           AATTGAATGACCCAACTGTTAGCTC-CTGATCCATACCCCTCATGAATGTGATAACCGGG
JMFF005D09+           AATTGAATGACCCAACTGTTAGCTC-CTGATCCATACCCCTCATGAATGTGATAACCGGG
JMFF020N13+           AATTGAATGACCCAACTGTTAGCTCGGTGATCCATACCCCTCATGAATGTGATAACCGGG
                      ____________________________________________________________
consensus             AATTGAATGACCCAACTGTTAGCTC-CTGATCCATACCCCTCATGAATGTGATAACCGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006H13+           TAACGTCCCATCAAGGCACACAGCTCCTTTAGCATCAGCTCCTTGAATGAGAGTAAGGGG
JMFF005D09+           TAACGTCCCATCAAGGCACACAGCTCCTTTAGCATCAGCTCCTTGAATGAGAGTAAGGGG
JMFF020N13+           TAACGTCCCATCAAGGCACACAGCTCCTTTAGCATCAGCTCCTTGAATGAGAGTAAGGGG
                      ____________________________________________________________
consensus             TAACGTCCCATCAAGGCACACAGCTCCTTTAGCATCAGCTCCTTGAATGAGAGTAAGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006H13+           AACCAAAACAGGGTTAGGATTAGTGTCGGCAGCAGAGGCGGCGCCGCCGTAGACAGATTG
JMFF005D09+           AACCAAAACAGGGTTAGGATTAGTGTCGGCAGCAGAGGCGGCGCCGCCGTAGACAGATTG
JMFF020N13+           AACCAAAACAGGGTTAGGATTAGTGTCGGCAGCAGAGGCGGCGCCGCCGTAGACAGATTG
                      ____________________________________________________________
consensus             AACCAAAACAGGGTTAGGATTAGTGTCGGCAGCAGAGGCGGCGCCGCCGTAGACAGATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006H13+           CAAGAATGGCAGCTCCGTTTTGTTGAAGAAAAACTCCTCAAATTCACGGCCTTCAACAGC
JMFF005D09+           CAAGAATGGCAGCTCCGTTTTGTTGAAGAAAAACTCCTCAAATTCACGGCCTTCAACAGC
JMFF020N13+           CAAGAATGGCAGCTCCGTTTTGTTGAAGAAAAACTCCTCAAATTCACGGCCTTCAACAGC
                      ____________________________________________________________
consensus             CAAGAATGGCAGCTCCGTTTTGTTGAAGAAAAACTCCTCAAATTCACGGCCTTCAACAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006H13+           CACACCCAACAAAAACCCAATGCAAATCACCCCCAGCAACCCCAT               
JMFF005D09+           CACACCCAACAAAAACCCAATGCAAATCACCCCCAGCAACCCCAT               
JMFF020N13+           CACACCCAACAAAAACCCAATGCAAATCACCCCCACCAACCCCATCAGCCTCCTCTTCTC
                      ____________________________________________________________
consensus             CACACCCAACAAAAACCCAATGCAAATCACCCCCAGCAACCCCATCAGCCTCCTCTTCTC