Contig 011531:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS129B02+                                          GAACCCGCGTCCACNCCGTGGAGCCATTG
                      ____________________________________________________________
consensus                                            GAACCCGCGTCCACNCCGTGGAGCCATTG
 
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JMFS129B02+           CCCCTCTTCCCCTCCCACCATCATCATCACCTCTAGACAGTATCCCAACTGCCTTTTTAA
                      ____________________________________________________________
consensus             CCCCTCTTCCCCTCCCACCATCATCATCACCTCTAGACAGTATCCCAACTGCCTTTTTAA
 
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JMFS129B02+           CTGCTTCCTCCCTGCTCAATCTTGGGCTGGGAAGCTTGCTAGATTCAGCTTGAGGAGTTT
JMFF050D14+                                                                GGAGTTT
                      ____________________________________________________________
consensus             CTGCTTCCTCCCTGCTCAATCTTGGGCTGGGAAGCTTGCTAGATTCAGCTTGAGGAGTTT
 
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JMFS129B02+           TCCTCGCCCGTAGATGCCGGTTTTCTTCCTTAGG-TTTTCTGAAACAGGAGGTGTTACTG
JMFF050D14+           TCCTCGCCCGTAGATGCCGGTTTTCTTCCTTAGGTTTTTCTGAAACAGGAGGTGTTACTG
JMFF019L04+               CGCCNGTAGATGCCGGTTTTCTTCCTTAGGTTTTTCTGAAACAGGAGGTGTTACTG
                      ____________________________________________________________
consensus             TCCTCGCCCGTAGATGCCGGTTTTCTTCCTTAGGTTTTTCTGAAACAGGAGGTGTTACTG
 
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JMFS129B02+           TGGGCTTTCCACGCCCAGCACCGGATAGCACAGAAAGGATACTCGAAGGGAGACTGGAAT
JMFF050D14+           TGGGCTTTCCACGCCCAGCACCGGATAGCACAGAAAGGATACTCGAAGGGAGACTGGAAT
JMFF019L04+           TGGGCTTTCCACGCCCAGCACCGGATAGCACAGAAAGGATACTCGAAGGGAGACTGGAAT
                      ____________________________________________________________
consensus             TGGGCTTTCCACGCCCAGCACCGGATAGCACAGAAAGGATACTCGAAGGGAGACTGGAAT
 
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JMFS129B02+           CCGCAGACGCTTTGGTTTGGGAATCCGAAGACTCTTCTCCTGCCACGAAGAACTTATGTT
JMFF050D14+           CCGCAGACGCTTTGGTTTGGGAATCCGAAGACTCTTCTCCTGCCACGAAGAACTTATGTT
JMFF019L04+           CCGCAGACGCTTTGGTTTGGGAATCCGAAGACTCTTCTCCTGCCACGAAGAACTTATGTT
                      ____________________________________________________________
consensus             CCGCAGACGCTTTGGTTTGGGAATCCGAAGACTCTTCTCCTGCCACGAAGAACTTATGTT
 
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JMFS129B02+           GCGGCTGTTGCAGTGACATCCGCTGTTGGGATGGTGATGGAACAGAAATTGGTAAGGGAA
JMFF050D14+           GCGGCTGTTGCAGTGACATCCGCTGTTGGGATGGTGATGGAACAGAAATTGGTAAGGGAA
JMFF019L04+           GCGGCTGTTGCAGTGACATCCGCTGTTGGGATGGTGATGGAACAGAAATTGGTAAGGGAA
                      ____________________________________________________________
consensus             GCGGCTGTTGCAGTGACATCCGCTGTTGGGATGGTGATGGAACAGAAATTGGTAAGGGAA
 
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JMFS129B02+           CACCTCGGCCGTGGCCAGCGGGGGTGGCGGCAGAAGCATTACCCGCCACAAACTGATCTG
JMFF050D14+           CACCTCGGCCGTGGCCAGCGGGGGTGGCGGCAGAAGCATTACCCGCCACAAACTGATCTG
JMFF019L04+           CACCTCGGCCGTGGCCAGCGGGGGTGGCGGCAGAAGCATTACCCGCCACAAACTGATCTG
                      ____________________________________________________________
consensus             CACCTCGGCCGTGGCCAGCGGGGGTGGCGGCAGAAGCATTACCCGCCACAAACTGATCTG
 
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JMFS129B02+           AGGAGGAGAAGGAAGAGGGGAAGGGCTTACCGCTTCCACGGCCATGCCCAATTCCACTCG
JMFF050D14+           AGGAGGAGAAGGAAGAGGGGAAGGGCTTACCGCTTCCACGGCCATGCCCAATTCCACTCG
JMFF019L04+           AGGAGGAGAAGGAAGAGGGGAAGGGCTTACCGCTTCCACGGCCATGCCCAATTCCACTCG
                      ____________________________________________________________
consensus             AGGAGGAGAAGGAAGAGGGGAAGGGCTTACCGCTTCCACGGCCATGCCCAATTCCACTCG
 
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JMFS129B02+           GTGGCTGTGGGGCAGCAGCTGA                                      
JMFF050D14+           GTGGCTGTGGGGCAGCAGCTGACTTATCATCCTTCGCATCATTGTTAGGAGTAAATCCAA
JMFF019L04+           GTGGCTGTGGGGCAGCAGCTGACTTATCATCCTTCGCATCATTGTTAGGAGTAAATCCAA
                      ____________________________________________________________
consensus             GTGGCTGTGGGGCAGCAGCTGACTTATCATCCTTCGCATCATTGTTAGGAGTAAATCCAA
 
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JMFF050D14+           AGATGGGGGAGTTGTCGGAGCCAAATCCACCACCTCCACGACCTCGGCCGCCTCCGCCGC
JMFF019L04+           AGATGGGGGAGTTGTCGGAGCCAAATCCACCACCTCCACGACCTCGGCCGCCTCCGCCGC
                      ____________________________________________________________
consensus             AGATGGGGGAGTTGTCGGAGCCAAATCCACCACCTCCACGACCTCGGCCGCCTCCGCCGC
 
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JMFF050D14+           CAGTGGAAGTTGAGAATGCGGAAGAAATGAAGGATTGCCGGGCGGAGATTGTGCAGCAGC
JMFF019L04+           CAGTGGAAGTTGAGAATGCGGAAGAAATGAAGGATTGCCGGGCGGAGATTGTGCAGCAGC
                      ____________________________________________________________
consensus             CAGTGGAAGTTGAGAATGCGGAAGAAATGAAGGATTGCCGGGCGGAGATTGTGCAGCAGC
 
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JMFF050D14+           GTGGAAGCTTTCCCCAGCTGTGTCTCATGTCTAAATCCCAATTCGT              
JMFF019L04+           GTGGAAGCTTTCCCCAGCTGTGTCTCATGTCTAAATCCCAATTCGTTGCAAACACAAACT
                      ____________________________________________________________
consensus             GTGGAAGCTTTCCCCAGCTGTGTCTCATGTCTAAATCCCAATTCGTTGCAAACACAAACT