Contig 011525:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018A06Sequence544011525 (2)ref|XP_009763272.1|89.7PREDICTED: uncharacterized protein LOC104215218 [Nicotiana sylvestris]716011525 (2)ref|XP_009763272.1|72.0PREDICTED: uncharacterized protein LOC104215218 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF018A06-                                      TCTCCTTCAATTACAATTACAATAAAGGGAAA
                      ____________________________________________________________
consensus                                         TCTCCTTCAATTACAATTACAATAAAGGGAAA
 
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rJMFF018A06-          GAAGAGTGAGAAACCCTAAATGTTACAATTTGAAGGCTGTCTAAGGCAAATCCTAACTTA
                      ____________________________________________________________
consensus             GAAGAGTGAGAAACCCTAAATGTTACAATTTGAAGGCTGTCTAAGGCAAATCCTAACTTA
 
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rJMFF018A06-          CAATCCAAAGAAGGGATGTCTTTGGACCCTTTTTCTACTCTTTGGTGATTATTGTTTTGG
                      ____________________________________________________________
consensus             CAATCCAAAGAAGGGATGTCTTTGGACCCTTTTTCTACTCTTTGGTGATTATTGTTTTGG
 
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rJMFF018A06-          ATCAACTTCCCTAAAATTCATCACCCCATTACATATATATATACACATTACATGATTGAC
                      ____________________________________________________________
consensus             ATCAACTTCCCTAAAATTCATCACCCCATTACATATATATATACACATTACATGATTGAC
 
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rJMFF018A06-          TCATTAGGGGAAGACGAATCGCATATAAGGAAAATGACAAGACTAGCATTTTCTGACTCT
                      ____________________________________________________________
consensus             TCATTAGGGGAAGACGAATCGCATATAAGGAAAATGACAAGACTAGCATTTTCTGACTCT
 
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rJMFF018A06-          ATATACACAGGTAACTGCTAAAACAAAGAAATTGGTTTAGTAATTCTCACCCAAAAATCT
                      ____________________________________________________________
consensus             ATATACACAGGTAACTGCTAAAACAAAGAAATTGGTTTAGTAATTCTCACCCAAAAATCT
 
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rJMFF018A06-          ACATTTCTCACTGACTTTGATTTATTGCCCTGTCCGCATCTTCATGGACACCTCCGATTC
                      ____________________________________________________________
consensus             ACATTTCTCACTGACTTTGATTTATTGCCCTGTCCGCATCTTCATGGACACCTCCGATTC
 
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rJMFF018A06-          TAAGCTACAGCCGAAACCCTGCAGTTCCCATTGCAGTTGAAGCCTTCAATTCTCACCGGA
JMFF018A06+                                                                   CGGA
                      ____________________________________________________________
consensus             TAAGCTACAGCCGAAACCCTGCAGTTCCCATTGCAGTTGAAGCCTTCAATTCTCACCGGA
 
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rJMFF018A06-          GCTGGCTTGTGCCCAAACTTCATCCCGCACCCACCTCCATTCTTACGAGCAGAGGAGGGC
JMFF018A06+           GCTGGCTTGTGCCCAAACTTCATCCCGCACCCACCTCCATTCTTACGAGCAGAGGAGGGC
                      ____________________________________________________________
consensus             GCTGGCTTGTGCCCAAACTTCATCCCGCACCCACCTCCATTCTTACGAGCAGAGGAGGGC
 
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rJMFF018A06-          GAGGAGGATGGCAGTGGCGGTGATGCTGAAGTTAACGTTGCAAGTGGCAATGGGTATGGA
JMFF018A06+           GAGGAGGATGGCAGTGGCGGTGATGCTGAAGTTAACGTTGCAAGTGGCAATGGGTATGGA
                      ____________________________________________________________
consensus             GAGGAGGATGGCAGTGGCGGTGATGCTGAAGTTAACGTTGCAAGTGGCAATGGGTATGGA
 
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rJMFF018A06-          ACAAAATTTTCATTGCTGAATTGTGCATCTTGGATCAGGGGATTTGATGCCCTGCTCGGT
JMFF018A06+           ACAAAATTTTCATTGCTGAATTGTGCATCTTGGATCAGGGGATTTGATGCCCTGCTCGGT
                      ____________________________________________________________
consensus             ACAAAATTTTCATTGCTGAATTGTGCATCTTGGATCAGGGGATTTGATGCCCTGCTCGGT
 
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rJMFF018A06-          GGGGAACCAAAGAAAAATGGCGGTGATGAAGCCCCCTCATGGATATTGAGTTTTCCAGCA
JMFF018A06+           GGGGAACCAAAGAAAAATGGCGGTGATGAAGCCCCCTCATGGATATTGAGTTTTCCAGCA
                      ____________________________________________________________
consensus             GGGGAACCAAAGAAAAATGGCGGTGATGAAGCCCCCTCATGGATATTGAGTTTTCCAGCA
 
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rJMFF018A06-          CCAGAAGTCTCCTTGGTGAAAATA                                    
JMFF018A06+           CCAGAAGTCTCCTTGGTGAAAATAATGTCCAGAATCTCAGTCCCAGCATCTGAATCACAA
                      ____________________________________________________________
consensus             CCAGAAGTCTCCTTGGTGAAAATAATGTCCAGAATCTCAGTCCCAGCATCTGAATCACAA
 
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JMFF018A06+           GCCTTCATTTGTCCACTGAACTCCAGGAAACAAAAAGGTCTGATGGATTCATTAACTCTG
                      ____________________________________________________________
consensus             GCCTTCATTTGTCCACTGAACTCCAGGAAACAAAAAGGTCTGATGGATTCATTAACTCTG
 
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JMFF018A06+           CGAGGCTTGGGGCACACAACACCATTTGAGATTGAAGAGTATCCTCCTGAAGCCCTCATC
                      ____________________________________________________________
consensus             CGAGGCTTGGGGCACACAACACCATTTGAGATTGAAGAGTATCCTCCTGAAGCCCTCATC
 
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JMFF018A06+           ATCATTTTCCCCTCGCTTGCTCTCGTCACTAATCCTATTCCTTAGGGCTAGGAGTCAGAG
                      ____________________________________________________________
consensus             ATCATTTTCCCCTCGCTTGCTCTCGTCACTAATCCTATTCCTTAGGGCTAGGAGTCAGAG
 
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JMFF018A06+           ATAGAGGCGAATAAGCAGGAGGAGAAATGGAAGAGAGATTTTGAGGGGACGGCGGAGAAC
                      ____________________________________________________________
consensus             ATAGAGGCGAATAAGCAGGAGGAGAAATGGAAGAGAGATTTTGAGGGGACGGCGGAGAAC