Contig 011520:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017D05Sequence506011520 (2)ref|XP_002520001.1|2e-37electron transporter, putative [Ricinus communis] gb|EEF42325.1| electron transp791011520 (2)ref|XP_010255717.1|281PREDICTED: uncharacterized protein LOC104596332 [Nelumbo nucifera]

Alignment

This contig is upended


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rJMFF017D05-                                                              ACTTAGGT
                      ____________________________________________________________
consensus                                                                 ACTTAGGT
 
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rJMFF017D05-          TGATGATAAGTACACTTTGAGAGTAATTGCCATTAAACAGTTCATATTCACTCTTTCACT
                      ____________________________________________________________
consensus             TGATGATAAGTACACTTTGAGAGTAATTGCCATTAAACAGTTCATATTCACTCTTTCACT
 
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rJMFF017D05-          ACATAAAAGACAGGCTCTTGTCAACATTAGCCTTTGCAACATATATGCATTTCTAAGAAC
                      ____________________________________________________________
consensus             ACATAAAAGACAGGCTCTTGTCAACATTAGCCTTTGCAACATATATGCATTTCTAAGAAC
 
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rJMFF017D05-          ACATACATTGGATATGAAGATTAAGAATGAGGTGGAATATTTTGAACATAGGATTTCTTC
                      ____________________________________________________________
consensus             ACATACATTGGATATGAAGATTAAGAATGAGGTGGAATATTTTGAACATAGGATTTCTTC
 
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rJMFF017D05-          TCTGGTTTTTCTTCATTGAAGTCCATAAACTAGCAGAGCTCCAACACCACCGATCCCAAC
                      ____________________________________________________________
consensus             TCTGGTTTTTCTTCATTGAAGTCCATAAACTAGCAGAGCTCCAACACCACCGATCCCAAC
 
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rJMFF017D05-          TAAAAGCCCGATGATGACTCCGATGGGAGGCAGCCCTCCGCCAACCGCTTTTCCAGTGTT
                      ____________________________________________________________
consensus             TAAAAGCCCGATGATGACTCCGATGGGAGGCAGCCCTCCGCCAACCGCTTTTCCAGTGTT
 
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rJMFF017D05-          GACATCATACGGTAAAAACCTCTTCTTTGGCGCCCTGCATTGGGGACATACGTAACCATC
                      ____________________________________________________________
consensus             GACATCATACGGTAAAAACCTCTTCTTTGGCGCCCTGCATTGGGGACATACGTAACCATC
 
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rJMFF017D05-          CGGCTGCTCTTCGAAAGGCTTCTGCAACGTGTAGATGTATCCACAATCAAGGCATATGTG
                      ____________________________________________________________
consensus             CGGCTGCTCTTCGAAAGGCTTCTGCAACGTGTAGATGTATCCACAATCAAGGCATATGTG
 
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rJMFF017D05-          CGTTGCTCGGGCCTTTTGAGCATCAGTTAATTTCCTTCCAAAGCGAGGAGGAGCCGGACG
                      ____________________________________________________________
consensus             CGTTGCTCGGGCCTTTTGAGCATCAGTTAATTTCCTTCCAAAGCGAGGAGGAGCCGGACG
 
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rJMFF017D05-          CTTTGGCAGTCTTTTAACATCTACATCAACTCCCCTGCTAACAACGAAGTACACAGATTC
JMFF017D05+                                             CTGCTAACAACGAAGTACACAGATTC
                      ____________________________________________________________
consensus             CTTTGGCAGTCTTTTAACATCTACATCAACTCCCCTGCTAACAACGAAGTACACAGATTC
 
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rJMFF017D05-          GGGCACAGCCTGGATTGCTGTCTTTGTAAACCCGAGCTTGTCAGCTGGCCAAAGTTCATC
JMFF017D05+           GGGCACAGCCTGGATTGCTGTCTTTGTAAACCCGAGCTTGTCAGCTGGCCAAAGTTCATC
                      ____________________________________________________________
consensus             GGGCACAGCCTGGATTGCTGTCTTTGTAAACCCGAGCTTGTCAGCTGGCCAAAGTTCATC
 
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rJMFF017D05-          TCCAAAAAAGCTGCTGGTGTAGATCACTTGGTCACCAGCCTTGAGCCCTGCTTTGGCAGC
JMFF017D05+           TCCAAAAAAGCTGCTGGTGTAGATCACTTGGTCACCAGCCTTGAGCCCTGCTTTGGCAGC
                      ____________________________________________________________
consensus             TCCAAAAAAGCTGCTGGTGTAGATCACTTGGTCACCAGCCTTGAGCCCTGCTTTGGCAGC
 
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rJMFF017D05-          ATTTCCACCATTTTCCACAGCAGTAATGACAACCCCA-CCACCAGATTTTTGACCAAGAG
JMFF017D05+           ATTTCCACCATTTTCCACAGCAGTAATGACAACCCCACCCACCAGATTTTTGACCAAGAG
                      ____________________________________________________________
consensus             ATTTCCACCATTTTCCACAGCAGTAATGACAACCCCACCCACCAGATTTTTGACCAAGAG
 
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rJMFF017D05-          TGAGTCCCAATGGCTTGTCAACTTCNACCTCAATGTTCTTGGCAGCAGTTCTTGCAGTGA
JMFF017D05+           TGAGTCCCAATGGCTTGTCAACTTCAACCTCAATGTTCTTGGCAGCAGTTCTTGCAGTGA
                      ____________________________________________________________
consensus             TGAGTCCCAATGGCTTGTCAACTTCAACCTCAATGTTCTTGGCAGCAGTTCTTGCAGTGA
 
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rJMFF017D05-          TCAC                                                        
JMFF017D05+           TCACAAGGTCTCTTCTTCCTCTTGTAACGCTCAAACTAACACCCTTCTCAGCCAAGAACA
                      ____________________________________________________________
consensus             TCACAAGGTCTCTTCTTCCTCTTGTAACGCTCAAACTAACACCCTTCTCAGCCAAGAACA
 
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JMFF017D05+           AATTGGAGATGCCCCTTCTCGAGTCTTGAAGTGATACCCCTTGAAAACTAGTTTTCTGGC
                      ____________________________________________________________
consensus             AATTGGAGATGCCCCTTCTCGAGTCTTGAAGTGATACCCCTTGAAAACTAGTTTTCTGGC
 
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JMFF017D05+           ATTGGGGAGCGGAGGGAGTGGCTCTGTTGACTGATCTGCCTCGGGAGTAGGCGGCGGAGG
                      ____________________________________________________________
consensus             ATTGGGGAGCGGAGGGAGTGGCTCTGTTGACTGATCTGCCTCGGGAGTAGGCGGCGGAGG
 
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JMFF017D05+           AGGTGCCGGCGGCGACCACCGTTGATGACATGTTCACAAGTAATTGGATGGTGGCAAATC
                      ____________________________________________________________
consensus             AGGTGCCGGCGGCGACCACCGTTGATGACATGTTCACAAGTAATTGGATGGTGGCAAATC