Contig 011518:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF051O10-                                                            ATATTGAAAC
                      ____________________________________________________________
consensus                                                               ATATTGAAAC
 
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rJMFF051O10-          TGGGAATTCTTTTATTTATGGCATGCATCAAGAAGTACAGTTGATGGAAGCCAAAGGCAA
                      ____________________________________________________________
consensus             TGGGAATTCTTTTATTTATGGCATGCATCAAGAAGTACAGTTGATGGAAGCCAAAGGCAA
 
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rJMFF051O10-          CCTTATTAATTACACACCAAATTAAAATTAAAAAACCCATTAAAGGTAGCTAGGTAGTTA
                      ____________________________________________________________
consensus             CCTTATTAATTACACACCAAATTAAAATTAAAAAACCCATTAAAGGTAGCTAGGTAGTTA
 
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rJMFF051O10-          ATGAGGCTCCAGCCCAGCAATGGAATACAGCGTTGATGCAAATGCAGACACCAAATTCCA
JMFF051O10+                                       AGCGTTGATGCAAATGCAGACACCAAATTCCA
                      ____________________________________________________________
consensus             ATGAGGCTCCAGCCCAGCAATGGAATACAGCGTTGATGCAAATGCAGACACCAAATTCCA
 
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rJMFF051O10-          TCCCCATTTGGCATAAGTTTTTGCAGCCCGATTGCAGTAGTCAAAGCCATACCACATATC
JMFF051O10+           TCCCCATTGNGCATAAGTTTTGNCAGCCCGATTGCAGTAGTCAAAGCCATACCACATATC
                      ____________________________________________________________
consensus             TCCCCATTTGGCATAAGTTTTTGCAGCCCGATTGCAGTAGTCAAAGCCATACCACATATC
 
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rJMFF051O10-          TCTGGGCACACGCACGTTGTAGTAGAAGGTGACAGGCCTGGTAGAATGCCCCTGCCCATT
JMFF051O10+           TCTGGGCACACGCACGTTGTAGTAGAAGGTGACAGGCCTGGTAGAATGCCCCTGCCCATT
                      ____________________________________________________________
consensus             TCTGGGCACACGCACGTTGTAGTAGAAGGTGACAGGCCTGGTAGAATGCCCCTGCCCATT
 
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rJMFF051O10-          GATCGTAATATCATACGGTATCCACCCGTCGTATCCTCTCCGGTATACGTACACGTAGCA
JMFF051O10+           GATCGTAATATCATACGGTATCCACCCGTCGTATCCTCTCCGGTATACGTACACGTAGCA
                      ____________________________________________________________
consensus             GATCGTAATATCATACGGTATCCACCCGTCGTATCCTCTCCGGTATACGTACACGTAGCA
 
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rJMFF051O10-          TATCTGATACGTACAGGGACCCCATATCTGGAACGTATCTGTTGAACACCGCTCGAATGT
JMFF051O10+           TATCTGATACGTACAGGGACCCCATATCTGGAACGTATCTGTTGAACACCGCTCGAATGT
                      ____________________________________________________________
consensus             TATCTGATACGTACAGGGACCCCATATCTGGAACGTATCTGTTGAACACCGCTCGAATGT
 
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rJMFF051O10-          CCTCGAATATGAATCGTCTAACCTGNGTGCATAAACCTGATTCCCGTA            
JMFF051O10+           CCTCGAATATGGATCGTCTAACCTGGGTGCATAAACCTGATTCCCGTAAGCATCACCGAA
rJMFF016J18-                                           AACCTGATTCCCGTAAGCATCACCGAA
JMFF016J18+                                            AACCTGATTCCCGTAAGCATCACCGAA
                      ____________________________________________________________
consensus             CCTCGAATATGGATCGTCTAACCTGGGTGCATAAACCTGATTCCCGTAAGCATCACCGAA
 
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JMFF051O10+           TGAGAGGCTGATTTGGTCTCTGGTGGTTGAAGTGGAAGAGCAGCTTGTTCTTATGTCCAC
rJMFF016J18-          TGAGAGGCTGATTTGGTCTCTGGTGGTTGAAGTGGAAGAGCAGCTTGTTCTTATGTCCAC
JMFF016J18+           TGAGAGGCTGATTTGGTCTCTGGTGGTTGAAGTGGAAGAGCAGCTTGTTCTTATGTCCAC
                      ____________________________________________________________
consensus             TGAGAGGCTGATTTGGTCTCTGGTGGTTGAAGTGGAAGAGCAGCTTGTTCTTATGTCCAC
 
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JMFF051O10+           ATTGAAAGAGCATCTCGCATTCTGGTGGTTGAGGGTGGTGGTGTTGACGGCGAAGGAACG
rJMFF016J18-          ATTGAAAGAGCATCTCGCATTCTGGTGGTTGAGGGTGGTGGTGTTGACGGCGAAGGAACG
JMFF016J18+           ATTGAAAGAGCATCTCGCATTCTGGTGGTTGAGGGTGGTGGTGTTGACGGCGAAGGAACG
                      ____________________________________________________________
consensus             ATTGAAAGAGCATCTCGCATTCTGGTGGTTGAGGGTGGTGGTGTTGACGGCGAAGGAACG
 
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JMFF051O10+           AGGAGCTGGGTGCGCCGAAGAAAGGATTGAATTGGAAATTGATCTTGCCTGGGACTGGGA
rJMFF016J18-          AGGAGCTGGGTGCGCCGAAGAAAGGATTGAATTGGAAATTGATCTTGCCTGGGACTGGGA
JMFF016J18+           AGGAGCTGGGTGCGCCGAAGAAAGGATTGAATTGGAAATTGATCTTGCCTGGGACTGGGA
                      ____________________________________________________________
consensus             AGGAGCTGGGTGCGCCGAAGAAAGGATTGAATTGGAAATTGATCTTGCCTGGGACTGGGA
 
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JMFF051O10+           GATGGGTATGAAGAATAAGATCAGTGCTAAAAGAGGCACACAATCAACTTTTGCCATTGC
rJMFF016J18-          GATGGGTATGAAGAATAAGATCAGTGCTAAAAGAGGCACACAATCAACTTTTGCCATTGC
JMFF016J18+           GATGGGTATGAAGAATAAGATCAGTGCTAAAAGAGGCACACAATCAACTTTTGCCATTGC
                      ____________________________________________________________
consensus             GATGGGTATGAAGAATAAGATCAGTGCTAAAAGAGGCACACAATCAACTTTTGCCATTGC
 
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JMFF051O10+           CATTGCCATCTTCTTCAATTCTCCTCAGCCTGC                           
rJMFF016J18-          CATTGCCATCTTCTTCAATTCTCCTCAGCCTGCACGCAAAAACCCTGATCACAATGCCAC
JMFF016J18+           CATTGCCATCTTCTTCAATTCTCCTCAGCCTGCACGCAAAAACCCTGATCACAATGCCAC
                      ____________________________________________________________
consensus             CATTGCCATCTTCTTCAATTCTCCTCAGCCTGCACGCAAAAACCCTGATCACAATGCCAC