Contig 011516:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016D03Sequence626011516 (4)ref|XP_011002375.1|8e-37PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus 780011516 (4)ref|XP_007026358.1|9e-30Heavy metal transport/detoxification superfamily protein isoform 2 [Theobroma c
JMSF052D01Sequence628011516 (4)ref|XP_011002375.1|2e-46PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus 842011516 (4)emb|CDP04525.1|2e-31unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF016D03- ACATATATTGATTTAAATAATAATTCTGCAGACCATAC
rJMSF052D01- TATTGATTTAAATAATAATTCTGCAGACCATAC
                      ____________________________________________________________
consensus ACATATATTGATTTAAATAATAATTCTGCAGACCATAC
 
. : . : . : . : . : . :
rJMFF016D03- AAAAACGCAGTGCTAAAACTACATACATCTGCCAACTCAACCAATTCAACAAGTTCTTGA
rJMSF052D01- AAAAACGCAGTGCTAAAACTACATACATCTGCCAACTCAACCAATTCAACAAGTTCTTGA
                      ____________________________________________________________
consensus AAAAACGCAGTGCTAAAACTACATACATCTGCCAACTCAACCAATTCAACAAGTTCTTGA
 
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rJMFF016D03- AGTCACTATTTACAGCTTCTTCTTCACTTCTCCAGTTCTCCTCCATTATCCTCATCACCA
rJMSF052D01- AGTCACTATTTACAGCTTCTTCTTCACTTCTCCAGTTCTCCTCCATTATCCTCATCACCA
                      ____________________________________________________________
consensus AGTCACTATTTACAGCTTCTTCTTCACTTCTCCAGTTCTCCTCCATTATCCTCATCACCA
 
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rJMFF016D03- CACACCCAAAATTAAAGTTCAAATTATTAGGTAAAAATAAACAAAATTTAAAGAAATACA
rJMSF052D01- CACACCCAAAATTAAAGTTCAAATTATTAGGTAAAAATAAACAAAATTTAAAGAAATACA
                      ____________________________________________________________
consensus CACACCCAAAATTAAAGTTCAAATTATTAGGTAAAAATAAACAAAATTTAAAGAAATACA
 
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rJMFF016D03- CAACACTCTAACACCACGTCCATGCATTACATTACATTACGTAGTTGTTTAGCTGCATGC
rJMSF052D01- CAACACTCTAACACCACGTCCATGCATTACATTACATTACGTAGTTGTTTAGCTGCATGC
                      ____________________________________________________________
consensus CAACACTCTAACACCACGTCCATGCATTACATTACATTACGTAGTTGTTTAGCTGCATGC
 
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rJMFF016D03- TGCCTTATTAACATCATATCATCAGACCATGAAAAATTGCTTGCATGCATAAAAATTTCA
rJMSF052D01- TGCCTTATTAACATCATATCATCAGACCATGAAAAATTGCTTGCATGCATAAAAATTTCA
                      ____________________________________________________________
consensus TGCCTTATTAACATCATATCATCAGACCATGAAAAATTGCTTGCATGCATAAAAATTTCA
 
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rJMFF016D03- CCCTCCAGATCAGATGATCATGATCATGATCACATGAGGGTGCAAGCGTGAGGGTTGTCG
rJMSF052D01- CCCTCCAGATCAGATGATCATGATCATGATCACATGAGGGTGCAAGCGTGAGGGTTGTCG
                      ____________________________________________________________
consensus CCCTCCAGATCAGATGATCATGATCATGATCACATGAGGGTGCAAGCGTGAGGGTTGTCG
 
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rJMFF016D03- TCGCTGAAAATCTGAGGAGGATAGGCGTAATCCAAGTAGTATTTAGGGGGCATAGCCATG
rJMSF052D01- TCGCTGAAAATCTGAGGAGGATAGGCGTAATCCAAGTAGTATTTAGGGGGCATAGCCATG
                      ____________________________________________________________
consensus TCGCTGAAAATCTGAGGAGGATAGGCGTAATCCAAGTAGTATTTAGGGGGCATAGCCATG
 
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rJMFF016D03- AACTCGTTCTTCTTCATTTCTGTCTCATCCATTTTCTTTTCGTCTTCTTCTCCCTCTTTC
rJMSF052D01- AACTCGTTCTTCTTCATTTCTGTCTCATCCATTTTCTTTTCGTCTTCTTCTCCCTCTTTC
                      ____________________________________________________________
consensus AACTCGTTCTTCTTCATTTCTGTCTCATCCATTTTCTTTTCGTCTTCTTCTCCCTCTTTC
 
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rJMFF016D03- TTTTCCTCTTTCTTCTCCCCCTCTTTCTTCTCCTCATTGTCTTCCTTCTTCTCTTCTTCC
rJMSF052D01- TTTTCCTCTTTCTTCTCCCCTTCTTTCTTCTCCTCATTGTCTTCCTTCTTCTCTTCTTCC
                      ____________________________________________________________
consensus TTTTCCTCTTTCTTCTCCCCTTCTTTCTTCTCCTCATTGTCTTCCTTCTTCTCTTCTTCC
 
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rJMFF016D03- TTCACTATGGAAGCTTGCTTCCCTGTTTTCTTGTACACGTCCTTCGCAAGCTTCTCTGGA
rJMSF052D01- TTCACTATGGAAGCTTGCTTCCCTGTTTTCTTGTACACGTCCTTCGCAAGCTTCTCTGGA
JMSF052D01+ GTACACGTCCTTCGCAAGCTTCTCTGGA
                      ____________________________________________________________
consensus TTCACTATGGAAGCTTGCTTCCCTGTTTTCTTGTACACGTCCTTCGCAAGCTTCTCTGGA
 
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rJMFF016D03- TCCACCACGCCCTTTACCCTCACCTCATTGCTTCCAAGCTCCGTTGTCACTGATTCAACG
rJMSF052D01- TCCACCACGCCCTTTACCCTCACCTCATTGCTTCCAAGCTCCGTTGTCACTGATTCAACG
JMSF052D01+ TCCACCACGCCCTTTACCCTCACCTCATTGCTTCCAAGCTCCGTTGTCACTGATTCAACG
                      ____________________________________________________________
consensus TCCACCACGCCCTTTACCCTCACCTCATTGCTTCCAAGCTCCGTTGTCACTGATTCAACG
 
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rJMFF016D03- CCTTTAATTTTCTTGATTCGCTTCTGCAAGACCTGAGCGCATGCCTCACAATGCATTTGA
rJMSF052D01- CCTTTAATTTTCTTGATTCGCTTCTGCAAGACCTGAGCGCATGCCTCACAATGCATTTGA
JMSF052D01+ CCTTTAATTTTCTTGATTCGCTTCTGCAAGACCTGAGCGCATGCCTCACAATGCATTTGA
JMFF016D03+ GAGCGCATGCCTCACAATGCATTTGA
                      ____________________________________________________________
consensus CCTTTAATTTTCTTGATTCGCTTCTGCAAGACCTGAGCGCATGCCTCACAATGCATTTGA
 
. : . : . : . : . : . :
rJMFF016D03- ACTTTCANAANCACTGTTGCGA
rJMSF052D01- ACTTTCAGAACCACTGTTGCGACTGGAGGAGGCTCATCTTTCTTCTCTTCTTTAGGGGGC
JMSF052D01+ ACTTTCAGAACCACTGTTGCGACTGGAGGAGGCTCATCTTTCTTCTCTTCTTTAGGGGGC
JMFF016D03+ ACTTTCAGAACCACTGTTGCGACTGGAGGAGGCTCATCTTTCTTCTCTTCTTTAGGGGGC
                      ____________________________________________________________
consensus ACTTTCAGAACCACTGTTGCGACTGGAGGAGGCTCATCTTTCTTCTCTTCTTTAGGGGGC
 
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rJMSF052D01- TCTTTGATTTCT
JMSF052D01+ TCTTTGATTTC-TGCTTGGTTTCCTCAGCAGGGGGCTTGGGAATAGGCGAAATGAGGTCA
JMFF016D03+ TCTTTGATTTCTTGCTTGGTTTCCTCAGCAGGGGGCTTGGGAATAGGCGAAATGAGGTCA
                      ____________________________________________________________
consensus TCTTTGATTTCTTGCTTGGTTTCCTCAGCAGGGGGCTTGGGAATAGGCGAAATGAGGTCA
 
. : . : . : . : . : . :
JMSF052D01+ ACCTTTCTGCCACTTTTCTTCTGAATCCTTTCACACACTTTCATAGGATCAACACTCTTA
JMFF016D03+ ACCTTCCTGCCACTTTTCTTCTGAATCCTTTCACACACTTTCATAGGATCAACACTCTTA
                      ____________________________________________________________
consensus ACCTTTCTGCCACTTTTCTTCTGAATCCTTTCACACACTTTCATAGGATCAACACTCTTA
 
. : . : . : . : . : . :
JMSF052D01+ TTACCTTTCACCACAACTTTGCTTGCCTTATAATCCGCTGTTACTTCCTCCACTCCTTGG
JMFF016D03+ TTACCTTTCACCACAACTTTGCTTGCCTTATAATCCGCTGTTACTTCCTCCACTCCTTGG
                      ____________________________________________________________
consensus TTACCTTTCACCACAACTTTGCTTGCCTTATAATCCGCTGTTACTTCCTCCACTCCTTGG
 
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JMSF052D01+ AATCCTTTCAAGGATCTTGTGACTTTTCTAGCACAAGCCTCACAGTGCATATCAACCTTG
JMFF016D03+ AATCCTTTCAAGGATCTTGTGACTTTTCTAGCACAAGCCTCACAGTGCATATCAACCTTG
                      ____________________________________________________________
consensus AATCCTTTCAAGGATCTTGTGACTTTTCTAGCACAAGCCTCACAGTGCATATCAACCTTG
 
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JMSF052D01+ AGCACAATTTCAATCTTCTCTTCTTCCTCCTTTTTCTCTTCTTTCTTCTCTTCCTTGCTC
JMFF016D03+ AGCACAATTTCAATCTTCTCTTCTTCCTCCTTTTTCTCTTCTTTCTTCTCTTCCTTGCTC
                      ____________________________________________________________
consensus AGCACAATTTCAATCTTCTCTTCTTCCTCCTTTTTCTCTTCTTTCTTCTCTTCCTTGCTC
 
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JMSF052D01+ ACTTCTTCTTTCTTCTCACCCTCCTTCTTCCCTTCCCCTTTGTTCTCCTCACCCATGTCT
JMFF016D03+ ACTTCTTCTTTCTTCTCACCCTCCTTCTTCCCTTCCCCTTTGTTCTCCTCACCCATGTCT
                      ____________________________________________________________
consensus ACTTCTTCTTTCTTCTCACCCTCCTTCTTCCCTTCCCCTTTGTTCTCCTCACCCATGTCT
 
. : . : . : . : . : . :
JMSF052D01+ TGTAGACTTCTTTTTTATGAGTTTCTATATGGAAGAGTTCACTGTGTTCTGAAACT
JMFF016D03+ TGTAGACTTCTTTTTTATGAGTTTCTATATGGAAGAGTTCACTGTGTTCTGAAACTGCAC
                      ____________________________________________________________
consensus TGTAGACTTCTTTTTTATGAGTTTCTATATGGAAGAGTTCACTGTGTTCTGAAACTGCAC
 
. : . : . : . : . : . :
JMFF016D03+ AAGGAAATGAAAGGCCTTCTTTTAAACTCTCTCTCTCTCTTTCTCTCTCTCACACACACA
                      ____________________________________________________________
consensus AAGGAAATGAAAGGCCTTCTTTTAAACTCTCTCTCTCTCTTTCTCTCTCTCACACACACA
 
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JMFF016D03+ CTCTGTAGTGTGTATTTCTAGTGGTGAAGAAGAGCATTTAAGTAGAGTGGGGAGGCTCAC
                      ____________________________________________________________
consensus CTCTGTAGTGTGTATTTCTAGTGGTGAAGAAGAGCATTTAAGTAGAGTGGGGAGGCTCAC