Contig 011510:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014B16Sequence558011510 (4)292008193 (4)
JMFF015J04Sequence548011510 (4)746008193 (4)ref|XP_009767895.1|2e-16PREDICTED: protein AIR1-like [Nicotiana sylvestris]
JMFF029F17Sequence564011510 (4)718008193 (4)ref|XP_009767895.1|8e-19PREDICTED: protein AIR1-like [Nicotiana sylvestris]
JMFF040H09Sequence491011510 (4)719008193 (4)ref|XP_009767895.1|4e-17PREDICTED: protein AIR1-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF029F17+ TCTCAACAGGATCTGTTTCAGCAGTC
JMFF014B16+ CAGGATCTGTTTCAGCAGTC
JMFF015J04+ CAGGATCTGTTTCAGCAGTC
                      ____________________________________________________________
consensus TCTCAACAGGATCTGTTTCAGCAGTC
 
. : . : . : . : . : . :
JMFF029F17+ TTATTAACAATTTCTATTGTGTTGCTAGTCTTTTCATTTTCATCTTCCTTCACTTTGTCC
JMFF014B16+ TTATTAACAATTTCTATTGTGTTGCTAGTCTTTTCATTTTCATCTTCCTTCACTTTGTCC
JMFF015J04+ TTATTAACAATTTCTATTGTGTTGCTAGTCTTTTCATTTTCATCTTCCTTCACTTTGTCC
                      ____________________________________________________________
consensus TTATTAACAATTTCTATTGTGTTGCTAGTCTTTTCATTTTCATCTTCCTTCACTTTGTCC
 
. : . : . : . : . : . :
JMFF029F17+ TCCCCGATTATGTTGCTGCAGAAGTTTTCAGAACTCTTAAGCATTTCACCAGGCACATGT
JMFF014B16+ TCCCCGATTATGTTGCTGCAGAAGTTTTCAGAACTCTTAAGCATTTCACCAGGCACATGT
JMFF015J04+ TCCCCGATTATGTTGCTGCAGAAGTTTTCAGAACTCTTAAGCATTTCACCAGGC------
                      ____________________________________________________________
consensus TCCCCGATTATGTTGCTGCAGAAGTTTTCAGAACTCTTAAGCATTTCACCAGGCACATGT
 
. : . : . : . : . : . :
JMFF029F17+ TTTATATTTACAGTTAACTCCTGTGCACTAGCGTTTTGGTCCTCCTCGTCCTCGTCCTTC
JMFF040H09+ ACAGTTAACTCCTGTGCACTAGCGTTTTGGTCCTCCTCGTCCTCGTCCTTC
JMFF014B16+ TTTATATTTACAGTTAACTCCTGTGCACTAGCGTTTTGGTCCTCCTCGTCCTCGTCCTTC
JMFF015J04+ ---------ACAGTTAACTCCTGTGCACTAGCGTTTTGGTCCTCCTCGTCCTCGTCCTTC
                      ____________________________________________________________
consensus TTTATATTTACAGTTAACTCCTGTGCACTAGCGTTTTGGTCCTCCTCGTCCTCGTCCTTC
 
. : . : . : . : . : . :
JMFF029F17+ TTCCTTTTCTTTTTCTTATCTTTCCTGCTCTTCTTACTCTCAACACTCATCGACTCCTTA
JMFF040H09+ TTCCTTTTCTTTTTCTTATCTTTCCTGCTCTTCTTACTCTCAACACTCATCGACTCCTTA
JMFF014B16+ TTCCTTTTCTTTTTCTTATCTTTCCTGCTCTTCTTACTCTCAACACTCATCGACTCCTTA
JMFF015J04+ TTCCTTTTCTTTTTCTTATCTTTCCTGCTCTTCTTACTCTCAACACTCATCGACTCCTTA
                      ____________________________________________________________
consensus TTCCTTTTCTTTTTCTTATCTTTCCTGCTCTTCTTACTCTCAACACTCATCGACTCCTTA
 
. : . : . : . : . : . :
JMFF029F17+ AAAGCATCATCTATTTTCACGGAGTTTGCGCGTTGCATTGCTTTCTCCACGATTTTCAAG
JMFF040H09+ AAAGCATCATCTATTTTCACGGAGTTTGCGCGTTGCATTGCTTTCTCCACGATTTTCAAG
JMFF014B16+ AAAGCATCATCTATTTTCACGGAGTTTGCGCGTTGCATTGCTTTCTCCACGATTTTCAAG
JMFF015J04+ AAAGCATCATCTATTTTCACGGAGTTTGCGCGTTGCATTGCTTTCTCCACGATTTTCAAG
                      ____________________________________________________________
consensus AAAGCATCATCTATTTTCACGGAGTTTGCGCGTTGCATTGCTTTCTCCACGATTTTCAAG
 
. : . : . : . : . : . :
JMFF029F17+ CTAAGGTCCTCGTTAGCCTCCGCATCTTCGTCGCTGCTAATTGCAGCAGCGGCATCGTAT
JMFF040H09+ CTAAGGTCCTCGTTAGCCTCCGCATCTTCGTCGCTGCTAATTGCAGCAGCGGCATCGTAT
JMFF014B16+ CTAAGGTCCTCGTTAGCCTCCGCATCTTCGTCGCTGCTAATTGCAGCAGCGGCATCGTAT
JMFF015J04+ CTAAGGTCCTCGTTAGCCTCCGCATCTTCGTCGCTGCTAATTGCAGCAGCGGCATCGTAT
                      ____________________________________________________________
consensus CTAAGGTCCTCGTTAGCCTCCGCATCTTCGTCGCTGCTAATTGCAGCAGCGGCATCGTAT
 
. : . : . : . : . : . :
JMFF029F17+ TCCTTAGATTCATCTTCAATGAGTGGAGACGAAGAGCTCGATTTCAACTTCCTTTCTCTT
JMFF040H09+ TCCTTAGATTCATCTTCAATGAGTGGAGACGAAGAGCTCGATTTCAACTTCCTTTCTCTT
JMFF014B16+ TCCTTAGATTCATCTTCAATGAGTGGAGACGAAGAGCTCGATTTCAACTTCCTTTCTCTT
JMFF015J04+ TCCTTAGATTCATCTTCAATGAGTGGAGACGAAGAGCTCGATTTCAACTTCCTTTCTCTT
                      ____________________________________________________________
consensus TCCTTAGATTCATCTTCAATGAGTGGAGACGAAGAGCTCGATTTCAACTTCCTTTCTCTT
 
. : . : . : . : . : . :
JMFF029F17+ CTTCCCATCTTAACTACTGATCAGTCGATAAAAAATAATTAAGCAGAAAAATCAAGAAAA
JMFF040H09+ CTTCCCATCTTAACTACTGATCAGTCGATAAAAAATAATTAAGCAGAAAAATCAAGAAAA
JMFF014B16+ CTTCCCATCTTAACTACTGATCAGTCGATAAAAAATAATTAAGCAGAAAAATCAAGAAAA
JMFF015J04+ CTTCCCATCTTAACTACTGATCAGTCGATAAAAAATAATTAAGCAGAAAAATCAAGAAAA
                      ____________________________________________________________
consensus CTTCCCATCTTAACTACTGATCAGTCGATAAAAAATAATTAAGCAGAAAAATCAAGAAAA
 
. : . : . : . : . : . :
JMFF029F17+ ATTTGAGCGAGCGCTGAACTGCTGAAGAGTCGGAAGAAAACCCTAACCCTACACT
JMFF040H09+ ATTTGAGCGAGCGCTGAACTGCTGAAGAGTCGGAAGAAAACCCTAACCCTACACT
JMFF014B16+ ATTTGAGCGAGCGCTGAACTGCTGAAGAGTCGGAAGAAAACCCTAACCCTACACT
JMFF015J04+ ATTTGAGCGAGCGCTGAACTGCTGAAGAGTCGGAAGAAAACCCTAACCCTACACTTCTAC
                      ____________________________________________________________
consensus ATTTGAGCGAGCGCTGAACTGCTGAAGAGTCGGAAGAAAACCCTAACCCTACACTTCTAC