| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015I16 | Sequence | 528 | 011509 (10) | 702 | 011509 (10) | emb|CDP09933.1| | 4e-13 | unnamed protein product [Coffea canephora] | |||
| JMFF030F05 | Sequence | 484 | 011509 (10) | 669 | 011509 (10) | gb|EYU30299.1| | 1e-13 | hypothetical protein MIMGU_mgv11b015559mg, partial [Erythranthe guttata] | |||
| JMFF035G18 | Sequence | 525 | 011509 (10) | 650 | 011509 (10) | emb|CDP09933.1| | 2e-13 | unnamed protein product [Coffea canephora] | |||
| JMFF040A07 | Sequence | 611 | 011509 (10) | emb|CDP09933.1| | 2e-13 | unnamed protein product [Coffea canephora] | |||||
| JMFF041L19 | Sequence | 636 | 011509 (10) | emb|CDP09933.1| | 2e-11 | unnamed protein product [Coffea canephora] | 640 | 011509 (10) | gb|EYU30299.1| | 6e-14 | hypothetical protein MIMGU_mgv11b015559mg, partial [Erythranthe guttata] |
| JMFN017J16 | Sequence | 555 | 011509 (10) | ||||||||
This contig is upended
. : . : . : . : . : . :
rJMFF040A07- TA
rJMFF030F05- TANTAATA
rJMFF015I16- TA
____________________________________________________________
consensus TANTAATA
. : . : . : . : . : . :
rJMFF041L19- CATAATAGGCTGTTAATTGGCAATTAACTTACACCTAGATT
rJMFF040A07- ATTGAAGTACTAAGATTGACATAATAGGCTGTTAATTGGCAATTAACTTACACCTAGATT
rJMFF030F05- ATTGAAGTACTAAGATTGACATAATAGGCTGTTAATTGGCAATTAACTTACACCTAGATT
rJMFF015I16- ATTGAAGTACTAAGATTGACATAATAGGCTGTTAATTGGCAATTAACTTACACCTAGATT
rJMFF035G18- CCTAGATT
____________________________________________________________
consensus ATTGAAGTACTAAGATTGACATAATAGGCTGTTAATTGGCAATTAACTTACACCTAGATT
. : . : . : . : . : . :
rJMFF041L19- ACATTATTAAATTTTGCACTCTCTCTCTCTCTGATAAGAAGAATGAAAAACATTGCATGC
rJMFF040A07- ACATTATTAAATTTTGCACTCTCTCTCTCTCTGATAAGAAGAATGAAAAACATTGCATGC
rJMFF030F05- ACATTATTAAATTTTGCACTCTCTCTCTCTCTGATAAGAAGAATGAAAAACATTGCATGC
rJMFF015I16- ACATTATTAAATTTTGCACTCTCTCTCTCTCTGATAAGAAGAATGAAAAACATTGCATGC
rJMFF035G18- ACATTATTAAATTTTGCACTCTCTCTCTCTCTGATAAGAAGAATGAAAAACATTGCATGC
____________________________________________________________
consensus ACATTATTAAATTTTGCACTCTCTCTCTCTCTGATAAGAAGAATGAAAAACATTGCATGC
. : . : . : . : . : . :
rJMFF041L19- AATAAGGATTCTGGAAAATGAGAAGATCATATGAGAGAACTAAAGAAGAGGAGGACAAAC
rJMFF040A07- AATAAGGATTCTGGAAAATGAGAAGATCATATGAGAGAACTAAAGAAGAGGAGGACAAAC
rJMFF030F05- AATAAGGATTCTGGAAAATGAGAAGATCATATGAGAGAACTAAAGAAGAGGAGGACAAAC
rJMFF015I16- AATAAGGATTCTGGAAAATGAGAAGATCATATGAGAGAACTAAAGAAGAGGAGGACAAAC
rJMFF035G18- AATAAGGATTCTGGAAAATGAGAAGATCATATGAGAGAACTAAAGAAGAGGAGGACAAAC
____________________________________________________________
consensus AATAAGGATTCTGGAAAATGAGAAGATCATATGAGAGAACTAAAGAAGAGGAGGACAAAC
. : . : . : . : . : . :
rJMFF041L19- AAATCCAGGCGGAGGAGTTAGGCCACAAGTGGCGAGAAGTTGCAGAGCTAGTGGAAGGAA
rJMFF040A07- AAATCCAGGCGGAGGAGTTAGGCCACAAGTGGCGAGAAGTTGCAGAGCTAGTGGAAGGAA
rJMFF030F05- AAATCCAGGCGGAGGAGTTAGGCCACAAGTGGCGAGAAGTTGCAGAGCTAGTGGAAGGAA
rJMFF015I16- AAATCCAGGCGGAGGAGTTAGGCCACAAGTGGCGAGAAGTTGCAGAGCTAGTGGAAGGAA
rJMFF035G18- AAATCCAGGCGGAGGAGTTAGGCCACAAGTGGCGAGAAGTTGCAGAGCTAGTGGAAGGAA
____________________________________________________________
consensus AAATCCAGGCGGAGGAGTTAGGCCACAAGTGGCGAGAAGTTGCAGAGCTAGTGGAAGGAA
. : . : . : . : . : . :
rJMFF041L19- TATGTTGAGGTTGAGAAGCTTTATTCTTATGGTGGTGCACAGACATACCGCCGCCTCTAG
rJMFF040A07- TATGTTGAGGTTGAGAAGCTTTATTCTTATGGTGGTGCACAGACATACCGCCGCCTCTAG
rJMFF030F05- TATGTTGAGGTTGAGAAGCTTTATTCTTATGGTGGTGCACAGACATACCGCCGCCTCTAG
rJMFF015I16- TATGTTGAGGTTGAGAAGCTTTATTCTTATGGTGGTGCACAGACATACCGCCGCCTCTAG
rJMFF035G18- TATGTTGAGGTTGAGAAGCTTTATTCTTATGGTGGTGCACAGACATACCGCCGCCTCTAG
JMFN017J16+ CCTCTAG
JMFF041L19+ AGGTTGAGAAGCTTTATTCTTATGGTGGTGCACAGACATACCGCCGCCTCTAG
____________________________________________________________
consensus TATGTTGAGGTTGAGAAGCTTTATTCTTATGGTGGTGCACAGACATACCGCCGCCTCTAG
. : . : . : . : . : . :
rJMFF041L19- CTCCAGCAGCCCTTGAAGCACCGGGCAGCACACATTCTCCACCGGATTCCCTATTCCCAC
rJMFF040A07- CTCCAGCAGCCCTTGAAGCACCGGGCAGCACACATTCTCCACCGGATTCCCTATTCCCAC
rJMFF030F05- CTCCAGCAGCCCTTGAAGCACCGGGCAGCACACATTCTCCACCGGATTCCCTATTCCCAC
rJMFF015I16- CTCCAGCAGCCCTTGAAGCACCGGGCAGCACACATTCTCCACCGGATTCCCTATTCCCAC
rJMFF035G18- CTCCAGCAGCCCTTGAAGCACCGGGCAGCACACATTCTCCACCGGATTCCCTATTCCCAC
JMFN017J16+ CTCCAGCAGCCCTGNAAGCACCGGGCAGCACACATTCTCCACCGGATTCCCTATTCCCAC
JMFF035G18+ CCGGATTCCCTATTCCCAC
JMFF041L19+ CTCCAGCAGCCCTTGAAGCACCGGGCAGCACACATTCTCCACCGGATTCCCTATTCCCAC
____________________________________________________________
consensus CTCCAGCAGCCCTTGAAGCACCGGGCAGCACACATTCTCCACCGGATTCCCTATTCCCAC
. : . : . : . : . : . :
rJMFF041L19- GTGCACCAATCCGCCCAGAACGTCAACACA-CAGCCCTAATTTCAGCGCGTTTATTGGGC
rJMFF040A07- GTGCACCAATCCGCCCAGAACGTCAACACA-CAGCCCTAATTTCAGCGCGTTTATTGGGC
rJMFF030F05- GTGCACCAATCCGCCCAGAACGTCAACACA-CAGCCCTAATTTCAGCGCGTTTATTGGGC
rJMFF015I16- GTGCACCAATCCGCCCAGAACGTCAACACA-CAGCCCTAATTTCAGCGCGTTTATTGGGC
rJMFF035G18- GTGCACCAATCCGCCCAGAACGTCAACACA-CAGCCCTAATTTCAGCGCGTTTATTGGGC
JMFN017J16+ GTGCACCAATCCGCCCAGAACGTCAACACA-CAGCCCTAATTTCAGCGCGTTTATTGGGC
JMFF035G18+ GTGCACCAATCCGCCCAGAACGTCAACACACCAGCCCTAATTTCAGCGCGTTTATTGGGC
JMFF030F05+ GTCAACACA-CAGCCNTAATTTCAGCGCGTTTATTGGGC
JMFF041L19+ GTGCACCAATCCGCCCAGAACGTCAACACA-CAGCCCTAATTTCAGCGCGTTTATTGGGC
JMFF015I16+ CGCCCAGAACGTCAACACA-CAGCCCTAATTTCAGCGCGTTTATTGGGC
____________________________________________________________
consensus GTGCACCAATCCGCCCAGAACGTCAACACA-CAGCCCTAATTTCAGCGCGTTTATTGGGC
. : . : . : . : . : . :
rJMFF041L19- ATTTCGCCGCCGGTGGAGGAATAATTGTCCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGC
rJMFF040A07- ATTTCGCCGCCGGTGGAGGAATAATTGTCCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGC
rJMFF030F05- ATTTCGCCGCCGGTGGAGGAATAATTGTCCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGC
rJMFF015I16- ATTTCGCCGCCGGTGGAGGAATAATTGTCCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGC
rJMFF035G18- ATTTCGCCGCCGGTGGAGGAATAATTGTCCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGC
JMFN017J16+ ATTTCGCCGCCGGTGGAGGAATAATTGTCCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGC
JMFF035G18+ ATTTCGCCGCCGGTGGAGGAATAATTGTCCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGC
JMFF030F05+ ATTTCGCCGCCGGTGGAGGAATAATTGTCCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGC
JMFF041L19+ ATTTCGCCGCCGGTGGAGGAATAATTGTCCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGC
JMFF015I16+ ATTTCGCCGCCGGTGGAGGAATAATTGTCCCCCCTCCTCCTCNTCCTCCTCCGCCGCCGC
____________________________________________________________
consensus ATTTCGCCGCCGGTGGAGGAATAATTGTCCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGC
. : . : . : . : . : . :
rJMFF041L19- CGCCGCCACCTCCGCCAGGAGCGGGAGTATAAGGTGGGTATCCACCGCCGGGTGGGTTGA
rJMFF040A07- CGCCGCCACCTCCGCCAGGAGCGGGAGTATAAGGTGGGTATCCACCGCCGGGTGGGTTGA
rJMFF030F05- CGCCGCCACCTCCGCCAGGAGCGGGAGTATAAGGTGGGTATCCACCGCCGGGTGGGTTGA
rJMFF015I16- CGCCGCCACCTCCGCCAGGAGCGGGAGTATAAGGTGGGTATCCACCGCCGGGTGGGTTGA
rJMFF035G18- CGCCGCCACCTCCGCCAGGAGCGGGAGTATAAGGTGGGTATCCACCGCCGGGTGGGTTGA
JMFN017J16+ CGCCGCCACCTCCGCCAGGAGCGGGAGTATAAGGTGGGTATCCACCGCCGGGTGGGTTGA
JMFF035G18+ CGCCGCCACCTCCGCCAGGAGCGGGAGTATAAGGTGGGTATCCACCGCCGGGTGGGTTGA
JMFF030F05+ CGCCGCCACCTCCGCCAGGAGCGGGAGTATAAGGTGGGTATCCACCGCCGGGTGGGTTGA
JMFF041L19+ CGCCGCCACCTCCGCCAGGAGCGGGAGTATAAGGTGGGTATCCACCGCCGGGTGGGTTGA
JMFF015I16+ CGCCGCCACCTCCGCCAGGAGCGGGAGTATAAGGTGGGTATCCACCGCCGGGTGGGTTGA
____________________________________________________________
consensus CGCCGCCACCTCCGCCAGGAGCGGGAGTATAAGGTGGGTATCCACCGCCGGGTGGGTTGA
. : . : . : . : . : . :
rJMFF041L19- TTATCGGCGGCAGGATGCCGATAGGGGGTAAAACGACCGGAGGGTTTACGATCGGCGGCA
rJMFF040A07- TTATCGGCGGCAGGATGCCGATAGGGGGTAAAACGACCGGAGGGTTTACGATCGGCGGCA
rJMFF030F05- TTATCGGCGGCAGGATGCCGATAGGGGGTAAAACGACCGGAGGGTTTACGATCGGCGGCA
rJMFF015I16- TTATCGGCGGCAGGATGCCGATAGGGGGTAAAACGACCGGAGGGTTTACGATCGGCGGCA
rJMFF035G18- TTATCGGCGGCAGGATGCCGATAGGGGGTAAAACGACCGGAGGGTTTACGATCGGCGGCA
JMFN017J16+ TTATCGGCGGCAGGATGCCGATAGGGGGTAAAACGACCGGAGGGTTTACGATCGGCGGCA
JMFF035G18+ TTATCGGCGGCAGGATGCCGATAGGGGGTAAAACGACCGGAGGGTTTACGATCGGCGGCA
JMFF030F05+ TTATCGGCGGCAGGATGCCGATAGGGGGTAAAACGACCGGAGGGTTTACGATCGGCGGCA
JMFF041L19+ TTATCGGCGGCAGGATGCCGATAGGGGGTAAAACGACCGGAGGGTTTACGATCGGCGGCA
JMFF015I16+ TTATCGGCGGCAGGATGCCGATAGGGGGTAAAACGACCGGAGGGTTTACGATCGGCGGCA
____________________________________________________________
consensus TTATCGGCGGCAGGATGCCGATAGGGGGTAAAACGACCGGAGGGTTTACGATCGGCGGCA
. : . : . : . : . : . :
rJMFF041L19- AGATGCCGCCGGGAGGCGGTGAAATGACCGGAGGTCTTACAACCGGCGGATGTGGGCG
rJMFF040A07- AGATGCCGC
rJMFF030F05- AGATGCCGCCGGGAGGCGGTGAAATGACCGGAGGTCTTACAACCGGCGGATGTGGGCGGG
rJMFF015I16- AGATGCCGCCGGGAGGCGGTGAAATGACCGGAGGTCTTACAACCGGCGGATGTGGGCGGG
rJMFF035G18- AGATGCCGCCGGGAGGCGGTGAAATGACCGGAGGTCTTACAACCGGCGGATGTGGGCGGG
JMFN017J16+ AGATGCCGCCGGGAGGCGGTGAAATGACCGGAGGTCTTACAACCGGCGGATGTGGGCGGG
JMFF035G18+ AGATGCCGCCGGGAGGCGGTGAAATGACCGGAGGTCTTACAACCGGCGGATGTGGGCGGG
JMFF030F05+ AGATGCCGCCGGGAGGCGGTGAAATGACCGGAGGTCTTACAACCGGCGGATGTGGGCGGG
JMFF041L19+ AGATGCCGCCGGGAGGCGGTGAAATGACCGGAGGTCTTACAACCGGCGGATGTGGGCGGG
JMFF015I16+ AGATGCCGCCGGGAGGCGGTGAAATGACCGGAGGTCTTACAACCGGCGGATGTGGGCGGG
____________________________________________________________
consensus AGATGCCGCCGGGAGGCGGTGAAATGACCGGAGGTCTTACAACCGGCGGATGTGGGCGGG
. : . : . : . : . : . :
rJMFF030F05- GA
rJMFF015I16- GAGTTTTGGGTGGATGGGGGCGAGTTTTGGGCGGGCTA
rJMFF035G18- GAGTTTTGGGTGGATGGGGGCGAGTTTTGGGCGGGCTAGGGCG
JMFN017J16+ GAGTTTTGGGTGGATGGGGGCGAGTTTTGGGCGGGCTAGGGCGGTGGTAAGGAGGATAAG
JMFF035G18+ GAGTTTTGGGTGGATGGGGGCGAGTTTTGGGCGGGCTAGGGCGGTGGTAAGGAGGATAAG
JMFF030F05+ GAGTTTTGGGTGGATGGGGGCGAGTTTTGGGCGGGCTAGGGCGGTGGTAAGGAGGATAAG
JMFF041L19+ GAGTTTTGGGTGGATGGGGGCGAGTTTTGGGCGGGCTAGGGCGGTGGTAAGGAGGATAAG
JMFF015I16+ GAGTTTTGGGTGGATGGGGGCGAGTTTTGGGCGGGCTAGGGCGGTGGTAAGGAGGATAAG
____________________________________________________________
consensus GAGTTTTGGGTGGATGGGGGCGAGTTTTGGGCGGGCTAGGGCGGTGGTAAGGAGGATAAG
. : . : . : . : . : . :
JMFN017J16+ ACGGCGGGCTGCAGCCTCCACAGCCATAAACCGGCGGCGGGGGCAAGAAAGCCGCCATGA
JMFF035G18+ ACGGCGGGCTGCAGCCTCCACAGCCATAAACCGGCGGCGGGGGCAAGAAAGCCGCCATGA
JMFF030F05+ ACGGCGGGCTGCAGCCTCCACAGCCATAAACCGGCGGCGGGGGCAAGAAAGCCGCCATGA
JMFF041L19+ ACGGCGGGCTGCAGCCTCCACAGCCATAAACCGGCGGCGGGGGCAAGAAAGCCGCCATGA
JMFF015I16+ ACGGCGGGCTGCAGCCTCCACAGCCATAAACCGGCGGCGGGGGCAAGAAAGCCGCCATGA
____________________________________________________________
consensus ACGGCGGGCTGCAGCCTCCACAGCCATAAACCGGCGGCGGGGGCAAGAAAGCCGCCATGA
. : . : . : . : . : . :
JMFN017J16+ AAGCCATGCAAATGAAGAACAAAGCTGAAAACTTGAAACCCATAACAATGGAGGCTAGGG
JMFF035G18+ AAGCCATGCAAATGAAGAACAAAGCTGAAAACTTGAAACCCATAACAATGGAGGCTAGGG
JMFF030F05+ AAGCCATGCAAATGAAGAACAAAGCTGAAAACTTGAAACCCATAACAATGGAGGCTAGGG
JMFF041L19+ AAGCCATGCAAATGAAGAACAAAGCTGAAAACTTGAAACCCATAACAATGGAGGCTAGGG
JMFF015I16+ AAGCCATGCAAATGAAGAACAAAGCTGAAAACTTGAAACCCATAACAATGGAGGCTAGGG
____________________________________________________________
consensus AAGCCATGCAAATGAAGAACAAAGCTGAAAACTTGAAACCCATAACAATGGAGGCTAGGG
. : . : . : . : . : . :
JMFN017J16+ TTTTCACTT
JMFF035G18+ TTTTCACTTTTGAGTCCAATTTT
JMFF030F05+ TTTTCACTTTTGAGTCCAATTTT
JMFF041L19+ TTTTCACTTTTGAGTCCAA-TTTTGATGTTCTTCTAGGAACAATT
JMFF015I16+ TTTTCACTTTTGAGTCCAATTTTTGATGTTCTTCTAGGAACAATTGTGAATCATATATAT
____________________________________________________________
consensus TTTTCACTTTTGAGTCCAATTTTTGATGTTCTTCTAGGAACAATTGTGAATCATATATAT