Contig 011504:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF013D08-           AATAACTTATTCTTTGAAACAAGTCAGCAACGTACACAGATAGAACCACCGAATTTGTG
                      ____________________________________________________________
consensus              AATAACTTATTCTTTGAAACAAGTCAGCAACGTACACAGATAGAACCACCGAATTTGTG
 
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rJMFF013D08-          TTTTTGTAGTAGTCTATACTATAAAAGATCATTCCAGTACCAGAATCTGTGTCTGTCTGA
                      ____________________________________________________________
consensus             TTTTTGTAGTAGTCTATACTATAAAAGATCATTCCAGTACCAGAATCTGTGTCTGTCTGA
 
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rJMFF013D08-          ATTTGTCAGAAGGCAAAATGCACTTTTACTTTAAATTACCTATCTGCCATAAATAAACCA
rJMFF025N02-                                            ATTACCTATCTGCCATAAATAAACCA
                      ____________________________________________________________
consensus             ATTTGTCAGAAGGCAAAATGCACTTTTACTTTAAATTACCTATCTGCCATAAATAAACCA
 
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rJMFF013D08-          AACTAAAAGTACATTCATCAATTCTGTCCAACTAACTAATGTTACACCAGGTTCAGTCAT
rJMFF025N02-          AACTAAAAGTACATTCATCAATTCTGTCCAACTAACTAATGTTACACCAGGTTCAGTCAT
                      ____________________________________________________________
consensus             AACTAAAAGTACATTCATCAATTCTGTCCAACTAACTAATGTTACACCAGGTTCAGTCAT
 
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rJMFF013D08-          CATACATCCCAACCATCCTGCTCCCAAACATCCACAAGAAAATCTATCATTTCAGGAAGG
JMFF025N02+                            CTGCTCCCAAACATCCACAAGAAAATCTATCATTTCAGGAAGG
rJMFF025N02-          CATACATCCCAACCATCCTGCTCCCAAACATCCACAAGAAAATCTATCATTTCAGGAAGG
                      ____________________________________________________________
consensus             CATACATCCCAACCATCCTGCTCCCAAACATCCACAAGAAAATCTATCATTTCAGGAAGG
 
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rJMFF013D08-          GGTATAGGCTTAGCGAATTGTTTGTTGCTACCAAGTAAACTATCATATGTAGCATTCCAA
JMFF025N02+           GGTATAGGCTTAGCGAATTGTTTGTTGCTACCAAGTAAACTATCATATGTAGCATTCCAA
rJMFF025N02-          GGTATAGGCTTAGCGAATTGTTTGTTGCTACCAAGTAAACTATCATATGTAGCATTCCAA
                      ____________________________________________________________
consensus             GGTATAGGCTTAGCGAATTGTTTGTTGCTACCAAGTAAACTATCATATGTAGCATTCCAA
 
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rJMFF013D08-          CTTAATCTGGGCTCAAGCAGCTGCTGTGACTGATTTTCAGACTTTTTACTTCCCACCCAC
JMFF025N02+           CTTAATCTGGGCTCAAGCAGCTGCTGTGACTGATTTTCAGACTTTTTACTTCCCACCCAC
rJMFF025N02-          CTTAATCTGGGCTCAAGCAGCTGCTGTGACTGATTTTCAGACTTTTTACTTCCCACCCAC
JMFF013D08+                                                                   CCAC
                      ____________________________________________________________
consensus             CTTAATCTGGGCTCAAGCAGCTGCTGTGACTGATTTTCAGACTTTTTACTTCCCACCCAC
 
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rJMFF013D08-          TGCTGTCGAATTTGGGTCCATTGAATAAGTCCATGATTTACAAATTCAGAAGGGGTGTTT
JMFF025N02+           TGCTGTCGAATTTGGGTCCATTGAATAAGTCCATGATTTACAAATTCAGAAGGGGTGTTT
rJMFF025N02-          TGCTGTCGAATTTGGGTCCATTGAATAAGTCCATGATTTACAAATTCAGAAGGGGTGTTT
JMFF013D08+           TGCTGTCGAATTTGGGTCCATTGAATAAGTCCATGATTTACAAATTCAGAAGGGGTGTTT
                      ____________________________________________________________
consensus             TGCTGTCGAATTTGGGTCCATTGAATAAGTCCATGATTTACAAATTCAGAAGGGGTGTTT
 
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rJMFF013D08-          GTACTTCCACTGCTGTGGGCATCATGTGCCTGGGCTGACGTACTAATTGATGATATGCTT
JMFF025N02+           GTACTTCCACTGCTGTGGGCATCATGTGCCTGGGCTGACGTACTAATTGATGATATGCTT
rJMFF025N02-          GTACTTCCACTGCTGTGGGCATCATGTGCCTGGGCTGACGTACTAATTGATGATATGCTT
JMFF013D08+           GTACTTCCACTGCTGTGGGCATCATGTGCCTGGGCTGACGTACTAATTGATGATATGCTT
                      ____________________________________________________________
consensus             GTACTTCCACTGCTGTGGGCATCATGTGCCTGGGCTGACGTACTAATTGATGATATGCTT
 
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rJMFF013D08-          CCTCGAGACTGAACAACATTGTTATCCATGTCCCGTGTGCTAGTAGTCCAGAAATCTTCT
JMFF025N02+           CCTCGAGACTGAACAACATTGTTATCCATGTCCCGTGTGCTAGTAGTCCAGAAATCTTCT
rJMFF025N02-          CCTCGAGACTGAACAACATTGTTATCCATGTCCCGTGTGCTAGTAGTCCAGAAATCTTCT
JMFF013D08+           CCTCGAGACTGAACAACATTGTTATCCATGTCCCGTGTGCTAGTAGTCCAGAAATCTTCT
                      ____________________________________________________________
consensus             CCTCGAGACTGAACAACATTGTTATCCATGTCCCGTGTGCTAGTAGTCCAGAAATCTTCT
 
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rJMFF013D08-          GATGTGCTACGTACTGGAGCCTTGCTATCCTTTATTTTCTGCCTTCTTGCTGACTTGTTC
JMFF025N02+           GATGTGCTACGTACTGGAGCCTTGCTATCCTTTATTTTCTGCCTTCTTGCTGACTTGTTC
rJMFF025N02-          GATGTGCTACGTACTGGAGCCTTGCTATCCTTTATTTTCTGCCTTCTTGCTGACTTGTTC
JMFF001D14+                  TACGTACTGGAGCCTTGCTATCCTNTATTTTCTGCCTTCTTGCTGACTTGTTC
JMFF013D08+           GATGTGCTACGTACTGGAGCCTTGCTATCCTTTATTTTCTGCCTTCTTGCTGACTTGTTC
                      ____________________________________________________________
consensus             GATGTGCTACGTACTGGAGCCTTGCTATCCTTTATTTTCTGCCTTCTTGCTGACTTGTTC
 
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rJMFF013D08-          AAGGATAAAGTCAATTTTGCCTTATTATCGCATCCAAGACAACCAC              
JMFF025N02+           AAGGATAAAGTCAATTTTGCCTTATTATCGCATCCAAGACAACCAC              
rJMFF025N02-          AAGGATAAAGTCAATTTTGCCTTATTATCGCATCCAAGACAACCAC              
JMFF001D14+           AAGGATAAAGTCAATTNTNCCTTATTATCGCATCCAAGACAACCACTGCTCCCATGGCGG
JMFF013D08+           AAGGATAAAGTCAATTTTGCCTTATTATCGCATCCAAGACAACCAC-----CCATGGCGG
                      ____________________________________________________________
consensus             AAGGATAAAGTCAATTTTGCCTTATTATCGCATCCAAGACAACCACTGCTCCCATGGCGG
 
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JMFF001D14+           CGAGGATTTGGAGAAGCCCCAACCGCAAGAGATCCAACAGAGAGTAACGTTGCCACAATA
JMFF013D08+           CGAGGATTTGGAGAAGCCCCAACCGCAAGAGATCCAACAGAGAGTAACGTTGCCACAATA
                      ____________________________________________________________
consensus             CGAGGATTTGGAGAAGCCCCAACCGCAAGAGATCCAACAGAGAGTAACGTTGCCACAATA
 
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JMFF001D14+           AACNCCGATTCCAGGAAGATCTCACACGTCTTTCACAAATGCCTGAGAGAGAAAGGTGTG
JMFF013D08+           AACGCCGATTCCAGGAAGATCTCACACGTCTTTCACAAATGCCTGAGAGAGAAAGGTGTG
                      ____________________________________________________________
consensus             AACGCCGATTCCAGGAAGATCTCACACGTCTTTCACAAATGCCTGAGAGAGAAAGGTGTG
 
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JMFF001D14+           GCGATCTTTCTCCCTCTGTGTCAGTGCGAGGCCCTTCCCGAAATCGATCGCGTTCTGCAA
JMFF013D08+           GCGATCTTTCTCCCTCTGTGTCAGTGCGAGGCCCTTCCCGAAATCGATCGCGTTCTGCAA
                      ____________________________________________________________
consensus             GCGATCTTTCTCCCTCTGTGTCAGTGCGAGGCCCTTCCCGAAATCGATCGCGTTCTGCAA
 
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JMFF001D14+           GAGGATTAAAGTAATAGGTTC                                       
JMFF013D08+           GAGGATTAAAGTAATAGGTTCATACGGCTTTTCTGGTTCTCTCAGTGGTTACTAAAAGGA
                      ____________________________________________________________
consensus             GAGGATTAAAGTAATAGGTTCATACGGCTTTTCTGGTTCTCTCAGTGGTTACTAAAAGGA
 
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JMFF013D08+           AGAGGAAGAAGAAGAAGAGGCAGCTCAAAAACATTGGCATCGCGTATCTCCCGAAAAGGG
                      ____________________________________________________________
consensus             AGAGGAAGAAGAAGAAGAGGCAGCTCAAAAACATTGGCATCGCGTATCTCCCGAAAAGGG