Contig 011499:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012E01Sequence422011499 (2)ref|XP_009804465.1|1e-31PREDICTED: probable protein phosphatase 2C 63 [Nicotiana sylvestris]
JMFF015M18Sequence536011499 (2)ref|XP_009804465.1|2e-74PREDICTED: probable protein phosphatase 2C 63 [Nicotiana sylvestris]716021254ref|XP_009587432.1|4e-87PREDICTED: probable protein phosphatase 2C 63 [Nicotiana tomentosiformis] ref|XP

Alignment

This contig is upended


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JMFF015M18+                                                            AACGGAAGCAA
                      ____________________________________________________________
consensus                                                              AACGGAAGCAA
 
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JMFF015M18+           TCTGTGGCATTACTGGCAACGATCTCTTAACTAATCGAATAAAATCCTCTTCTGTGGCAT
                      ____________________________________________________________
consensus             TCTGTGGCATTACTGGCAACGATCTCTTAACTAATCGAATAAAATCCTCTTCTGTGGCAT
 
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JMFF015M18+           GAAAAGCCTTCTTGATTACATCCGTTGACAGTCCTCCTTGTTCCGTTGCAAATTGTTGTA
                      ____________________________________________________________
consensus             GAAAAGCCTTCTTGATTACATCCGTTGACAGTCCTCCTTGTTCCGTTGCAAATTGTTGTA
 
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JMFF015M18+           GATAAGGGAAGAGGTGGCGATTGACGAAGCGGGAAGCTTCAGGACCGCCGTGGCCATCGT
JMFF012E01+                                                                     GT
                      ____________________________________________________________
consensus             GATAAGGGAAGAGGTGGCGATTGACGAAGCGGGAAGCTTCAGGACCGCCGTGGCCATCGT
 
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JMFF015M18+           AGACACCGATGTAAGTAGCGGACGGAGAAGTGAGGACTTGGCTCTGGTCTTCGAGGGAGG
JMFF012E01+           AGACACCGATGTAAGTAGCGGACGGAGAAGTGAGGACTTGGCTCTGGTCTTCGAGGGAGG
                      ____________________________________________________________
consensus             AGACACCGATGTAAGTAGCGGACGGAGAAGTGAGGACTTGGCTCTGGTCTTCGAGGGAGG
 
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JMFF015M18+           AATTAGCCTGAACAACCGCAATTGAGAAGTCGCCGGAGGCGTGAGGCTTCAAGTCCATGT
JMFF012E01+           AATTAGCCTGAACAACCGCAATTGAGAAGTCGCCGGAGGCGTGAGGCTTCAAGTCCATGT
                      ____________________________________________________________
consensus             AATTAGCCTGAACAACCGCAATTGAGAAGTCGCCGGAGGCGTGAGGCTTCAAGTCCATGT
 
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JMFF015M18+           GCCACAGAAGTCCGTCGCCGCTCCGCAGGCCCAAACACCTCTCCAGCGGCCTAAAACACG
JMFF012E01+           GCCACAGAAGTCCGTCGCCGCTCCGCAGGCCCAAACACCTCTCCAGCGGCCTAAAACACG
                      ____________________________________________________________
consensus             GCCACAGAAGTCCGTCGCCGCTCCGCAGGCCCAAACACCTCTCCAGCGGCCTAAAACACG
 
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JMFF015M18+           ATCGCAACATGGCTCCTTACTGTTCCGTCCTTATACCTCAGAAATGATTCAAAAAACTCC
JMFF012E01+           ATCGCAACATGGCTCCTTACTGTTCCGTCCTTATACCTCAGAAATGATTCAAAAAACTCC
                      ____________________________________________________________
consensus             ATCGCAACATGGCTCCTTACTGTTCCGTCCTTATACCTCAGAAATGATTCAAAAAACTCC
 
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JMFF015M18+           GGCGAAGATCTCAAATACACGATAATGCACTAATACCTCGGAAACGAATTTTTTGTTCCT
JMFF012E01+           GGCGAAGATCTCAAATACACGATAATGCACTAATACCTCGGAAACGAATTTTTTGTTCCT
                      ____________________________________________________________
consensus             GGCGAAGATCTCAAATACACGATAATGCACTAATACCTCGGAAACGAATTTTTTGTTCCT
 
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JMFF015M18+           AAATATATATAAATATATATCTGTGTGTATATATAAAATAAATAC               
JMFF012E01+           AAATATATATAAATATATATCTGTGTGTATATATAAAATATATACACACAACACAACGTG
                      ____________________________________________________________
consensus             AAATATATATAAATATATATCTGTGTGTATATATAAAATATATACACACAACACAACGTG
 
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JMFF012E01+           TGTGTGTGTATATATATATATATTAGAGATAGATTATAGATGGAAGTGCGTATGAGAATT
                      ____________________________________________________________
consensus             TGTGTGTGTATATATATATATATTAGAGATAGATTATAGATGGAAGTGCGTATGAGAATT