Contig 011498:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011P16Sequence564011498 (3)ref|XP_006351268.1|3e-74PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Solanum tuberosum]791001063 (2)ref|XP_009618296.1|1e-102PREDICTED: inosine-5'-monophosphate dehydrogenase 2 {ECO:0000255|HAMAP-Rule:MF_0
JMSF007H09Sequence343011498 (3)ref|XP_006379655.1|4e-39hypothetical protein POPTR_0008s082301g, partial [Populus trichocarpa] gb|ERP574771000235 (181)ref|XP_008456347.1|4e-169PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo]
JMSF033B19Sequence669011498 (3)ref|XP_006351268.1|8e-102PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF033B19+                            CGCCATCCACTTCGCTCACCAATGGCACAAATTGAAGCTTTTG
                      ____________________________________________________________
consensus                              CGCCATCCACTTCGCTCACCAATGGCACAAATTGAAGCTTTTG
 
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JMSF033B19+           TGCCTCCAAATACCCAGCTACATCCTCAAAATTGTAGCTCGAGGGCAATGACACCGGCGA
                      ____________________________________________________________
consensus             TGCCTCCAAATACCCAGCTACATCCTCAAAATTGTAGCTCGAGGGCAATGACACCGGCGA
 
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JMSF033B19+           CTTCGTCATGTAATCTGAAACTCTAGCTTCCTTGTTACTCAAAGACTCCCAGGAAGACCT
JMFF011P16+                                               ACTCAAAGACTCCCAGGAAGACCT
                      ____________________________________________________________
consensus             CTTCGTCATGTAATCTGAAACTCTAGCTTCCTTGTTACTCAAAGACTCCCAGGAAGACCT
 
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JMSF033B19+           CGACACCACACCCAACAGTTTCGACCTCTGAGTTCCCGAATCGGTAACAAAAACGCAGGG
JMFF011P16+           CGACACCACACCCAACAGTTTCGACCTCTGAGTTCCCGAATCGGTAACAAAAACGCAGGG
                      ____________________________________________________________
consensus             CGACACCACACCCAACAGTTTCGACCTCTGAGTTCCCGAATCGGTAACAAAAACGCAGGG
 
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JMSF033B19+           AGCCGAGCCGAACTCATCCGCGGAGTGGATAGAATCGCCAGGGGATACAAACACCAAGTC
JMFF011P16+           AGCCGAGCCGAACTCATCCGCGGAGTGGATAGAATCGCCAGGGGATACAAACACCAAGTC
                      ____________________________________________________________
consensus             AGCCGAGCCGAACTCATCCGCGGAGTGGATAGAATCGCCAGGGGATACAAACACCAAGTC
 
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JMSF007H09+                                                     GGAGGCTTGTTGCGAAGG
JMSF033B19+           GGCAGTAAACGGGATCTTGTGAGACTTGGCGGAGCGGACAATGGAGGCTTGTTGCGAAGG
JMFF011P16+           GGCAGTAAACGGGATCTTGTGAGACTTGGCGGAGCGGACAATGGAGGCTTGTTGCGAAGG
                      ____________________________________________________________
consensus             GGCAGTAAACGGGATCTTGTGAGACTTGGCGGAGCGGACAATGGAGGCTTGTTGCGAAGG
 
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JMSF007H09+           CGTGGTGTTGGAATGGACGATACCAATCCCACCGAGAGCTGCCATGGCAGCTGCCATTGA
JMSF033B19+           CGTGGTGTTGGAATGGACGATACCAATCCCACCGAGAGCTGCCATGGCAGCTGCCATTGA
JMFF011P16+           CGTGGTGTTGGAATGGACGATACCAATCCCACCGAGAGCTGCCATGGCAGCTGCCATTGA
                      ____________________________________________________________
consensus             CGTGGTGTTGGAATGGACGATACCAATCCCACCGAGAGCTGCCATGGCAGCTGCCATTGA
 
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JMSF007H09+           GGACTCAGTAACTGTATCCATCGGCGAAGCCACGCACGGTATGGACAGGGAAACATTGCG
JMSF033B19+           GGACTCAGTAACTGTATCCATCGGCGAAGCCACGCACGGTATGGACAGGGAAACATTGCG
JMFF011P16+           GGACTCAGTAACTGTATCCATCGGCGAAGCCACGCACGGTATGGACAGGGAAACATTGCG
                      ____________________________________________________________
consensus             GGACTCAGTAACTGTATCCATCGGCGAAGCCACGCACGGTATGGACAGGGAAACATTGCG
 
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JMSF007H09+           GCTGAGCTTCGTGGTTAGGTCGACGGCGTCGGCCGGAAAATCTATGTATCCTGGAAGAAA
JMSF033B19+           GCTGAGCTTCGTGGTTAGGTCGACGGCGTCGGCCGGAAAATCTATGTATCCTGGAAGAAA
JMFF011P16+           GCTGAGCTTCGTGGTTAGGTCGACGGCGTCGGCCGGAAAATCTATGTATCCTGGAAGAAA
                      ____________________________________________________________
consensus             GCTGAGCTTCGTGGTTAGGTCGACGGCGTCGGCCGGAAAATCTATGTATCCTGGAAGAAA
 
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JMSF007H09+           TATAACATCGTCATAGGTATAAGAATAACCTTGATTAAATAATTTAACCGCCGGAAATCC
JMSF033B19+           TATAACATCGTCATAGGTATAAGAATAACCTTGATTAAATAATTTAACCGCCGGAAATCC
JMFF011P16+           TATAACATCGTCATAGGTATAAGAATAACCTTGATTAAATAATTTAACCGCCGGAAATCC
                      ____________________________________________________________
consensus             TATAACATCGTCATAGGTATAAGAATAACCTTGATTAAATAATTTAACCGCCGGAAATCC
 
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JMSF007H09+           ATCGTCAAACTGAGCTGCTCCGTCCGCCATTTGAGCCGGTATTTCTTAGTAGGAAAATGC
JMSF033B19+           ATCGTCAAACTGAGCTGCTCCGTCCGCCATTTGAGCCGGTATTTCTTAGTAGGAAAATGC
JMFF011P16+           ATCGTCAAACTGAGCTGCTCCGTCCGCCATTTGAGCCGGTATTTCTTAGTAGGAAAATGC
                      ____________________________________________________________
consensus             ATCGTCAAACTGAGCTGCTCCGTCCGCCATTTGAGCCGGTATTTCTTAGTAGGAAAATGC
 
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JMSF007H09+           GAATGAGGATATCTATGAATACTC                                    
JMSF033B19+           GAATGAGGATATCTATGAATACTC                                    
JMFF011P16+           GAATGAGGATATCTATGAATACTCGAATACAGAAAAACAGGGTTTTTGCGGTTTAAAGGT
                      ____________________________________________________________
consensus             GAATGAGGATATCTATGAATACTCGAATACAGAAAAACAGGGTTTTTGCGGTTTAAAGGT