Contig 011494:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010L12Sequence561011494 (3)679010999 (4)ref|XP_009784791.1|3e-105PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [N
JMFF010M03Sequence550011494 (3)gb|KDO48221.1|9e-09hypothetical protein CISIN_1g0422021mg, partial [Citrus sinensis]775010999 (4)ref|XP_009784791.1|2e-116PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [N
JMFF015J19Sequence536011494 (3)ref|XP_006493488.1|7e-24PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic-like i

Alignment

This contig is upended


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JMFF015J19+                        CCTCCTTAGCACATCCTCCCTCGAGTTGATCACCTCGAACAAACACT
                      ____________________________________________________________
consensus                          CCTCCTTAGCACATCCTCCCTCGAGTTGATCACCTCGAACAAACACT
 
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JMFF015J19+           CCGCTGTGCCTCTATCCACACCTCTCCCCGCCCCTTCTCCATATCNTGATTTGAACCTTG
                      ____________________________________________________________
consensus             CCGCTGTGCCTCTATCCACACCTCTCCCCGCCCCTTCTCCATATCNTGATTTGAACCTTG
 
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JMFF015J19+           TCCCTAAATTGACCATAACTATCCTGAAGCAAAGCCACGAAAACCGCCCCCCAAGCCCCC
JMFF010M03+                                                 GAAANCCGCCCCCCAAGCCCCC
                      ____________________________________________________________
consensus             TCCCTAAATTGACCATAACTATCCTGAAGCAAAGCCACGAAAACCGCCCCCCAAGCCCCC
 
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JMFF015J19+           GCCCCAATCCCAACAATCCTCAACAAGTCCCCCTCACCCTTGCCAAGATTTCGCCTTAGT
JMFF010M03+           GCCCCAATCCCAACAATCCTCAACAAGTCCCCCTCACCCTTGCCAAGATTTCGCCTTAGT
JMFF010L12+                                                  TTGCCAAGATTTCGCCTTAGT
                      ____________________________________________________________
consensus             GCCCCAATCCCAACAATCCTCAACAAGTCCCCCTCACCCTTGCCAAGATTTCGCCTTAGT
 
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JMFF015J19+           TCATCAAGCTTCTCCTCCAAACCATTAGGGTTTTGTATGCCCCCATTCACATACACTTTT
JMFF010M03+           TCATCAAGCTTCTCCTCCAAACCATTAGGGTTTTGTATGCCCCCATTCACATACACTTTT
JMFF010L12+           TCATCAAGCTTCTCCTCCAAACCATTAGGGTTTTGTATGCCCCCATTCACATACACTTTT
                      ____________________________________________________________
consensus             TCATCAAGCTTCTCCTCCAAACCATTAGGGTTTTGTATGCCCCCATTCACATACACTTTT
 
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JMFF015J19+           CCAC-TCATAACCCCTTCA-CCCACAACCATCTTTCTGCCAAAACTCAACCAAAAGCTCC
JMFF010M03+           CCAC-TCATAACCCCTTCA-CCCACAACCATCTTTCTGCCAAAACTCAACCAAAAGCTCC
JMFF010L12+           CCACTTCATAACCCCTTCACCCCACAACCATCTTTCTGCCAAAACTCAACCAAAAGCTCC
                      ____________________________________________________________
consensus             CCAC-TCATAACCCCTTCA-CCCACAACCATCTTTCTGCCAAAACTCAACCAAAAGCTCC
 
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JMFF015J19+           AAAACCAGCCTAGAAAACCCTTAAATAACCTATTAAGAATGTTCTTGACAGATAAAGATT
JMFF010M03+           AAAACCAGCCTAGAAAATCCTTAAATAACCTATTAAGAATGTTCTTGACAGATAAAGATT
JMFF010L12+           AAAACCAGCCTAGAAAATCCTTAAATAACCTATTAAGAATGTTCTTGACAGATAAAGATT
                      ____________________________________________________________
consensus             AAAACCAGCCTAGAAAATCCTTAAATAACCTATTAAGAATGTTCTTGACAGATAAAGATT
 
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JMFF015J19+           TCCTCAAGAAACCCAATCCTTATATGGATCTACCAGGCTTCAACACAAATTCCCAAATTG
JMFF010M03+           TCCTCAAGAAACCCAATCCTTATATGGATCTACCAGGCTTCAACACAAATTCCCAAATTG
JMFF010L12+           TCCTCAAGAAACCCAATCCTTATATGGATCTACCAGGCTTCAACACAAATTCCCAAATTG
                      ____________________________________________________________
consensus             TCCTCAAGAAACCCAATCCTTATATGGATCTACCAGGCTTCAACACAAATTCCCAAATTG
 
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JMFF015J19+           ATGGGCTAATCTCAAATGCAATATATCTAGACTAAGAAAACAAAAAGATCTTTACTTTCT
JMFF010M03+           ATGGGCTAATCTCAAATGCAATATATCTAGACTAAGAAAACAAAAAGATCTTTACTTTCT
JMFF010L12+           ATGGGCTAATCTCAAATGCAATATATCTAGACTAAGAAAACAAAAAGATCTTTACTTTCT
                      ____________________________________________________________
consensus             ATGGGCTAATCTCAAATGCAATATATCTAGACTAAGAAAACAAAAAGATCTTTACTTTCT
 
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JMFF015J19+           GCATCTACTAT                                                 
JMFF010M03+           GCATCTCCTATGAACCCTCAAAGAACTTCCTTGCAAGTTATGACAAACTGATAACTACAA
JMFF010L12+           GCATCTCCTATGAACCCTCAAAGAACTTCCTTGCAAGTTATGACAAACTGATAACTACAA
                      ____________________________________________________________
consensus             GCATCTCCTATGAACCCTCAAAGAACTTCCTTGCAAGTTATGACAAACTGATAACTACAA
 
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JMFF010M03+           AGACAGAATCTTTTCTAGTACAACCCCGACCTAAATCGACCAGAACTGATATTCTTAACA
JMFF010L12+           AGACAGAATCTTTTCTAGTACAACCCCGACCTAAATCGACCAGAACTGATATTCTTAACA
                      ____________________________________________________________
consensus             AGACAGAATCTTTTCTAGTACAACCCCGACCTAAATCGACCAGAACTGATATTCTTAACA
 
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JMFF010M03+           GCCTGCTAATAACAGAC                                           
JMFF010L12+           GCCTGCTAATAACAGACAAAATCCCAATCAAGAACAGTGATTATAACTAAAAAATTTTAC
                      ____________________________________________________________
consensus             GCCTGCTAATAACAGACAAAATCCCAATCAAGAACAGTGATTATAACTAAAAAATTTTAC
 
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JMFF010L12+           TAAATTGGGAACTTTGCATATGCAGCATTGTAGTGTCCGCCTAACTAAGTTTGTTCATCT
                      ____________________________________________________________
consensus             TAAATTGGGAACTTTGCATATGCAGCATTGTAGTGTCCGCCTAACTAAGTTTGTTCATCT