Contig 011489:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009L23Sequence566011489 (2)ref|XP_006449429.1|2e-39hypothetical protein CICLE_v10017311mg [Citrus clementina] ref|XP_006449430.1| h549011489 (2)ref|XP_006449429.1|1e-39hypothetical protein CICLE_v10017311mg [Citrus clementina] ref|XP_006449430.1| h

Alignment

This contig is upended


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rJMFF009L23+                                            ACTTCACAGTTTCACAGAGGTCAAGG
JMFF009L23-                                             ACTTCACAGTTTCACAGAGGTCAAGG
                      ____________________________________________________________
consensus                                               ACTTCACAGTTTCACAGAGGTCAAGG
 
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rJMFF009L23+          GCGACTAAGCTACTTTTTTCTGGGTATCAAGATCGAGCTTGAAGCATGGGGAAGAGGAAA
JMFF009L23-           GCGACTAAGCTACTTTTTTCTGGGTATCAAGATCGAGCTTGAAGCATGGGGAAGAGGAAA
                      ____________________________________________________________
consensus             GCGACTAAGCTACTTTTTTCTGGGTATCAAGATCGAGCTTGAAGCATGGGGAAGAGGAAA
 
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rJMFF009L23+          TCCAATTCAAAGCCGCCTCCAAAGAAGCGGAATGATAAACTTGACACTGTTTTTAGCTGC
JMFF009L23-           TCCAATTCAAAGCCGCCTCCAAAGAAGCGGAATGATAAACTTGACACTGTTTTTAGCTGC
                      ____________________________________________________________
consensus             TCCAATTCAAAGCCGCCTCCAAAGAAGCGGAATGATAAACTTGACACTGTTTTTAGCTGC
 
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rJMFF009L23+          CCATTTTGCAGCCATGGCACCAGTGTAGAGTGCCGCATTGACATGAAAAACGCGATTGGG
JMFF009L23-           CCATTTTGCAGCCATGGCACCAGTGTAGAGTGCCGCATTGACATGAAAAACGCGATTGGG
                      ____________________________________________________________
consensus             CCATTTTGCAGCCATGGCACCAGTGTAGAGTGCCGCATTGACATGAAAAACGCGATTGGG
 
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rJMFF009L23+          GAGGCAATTTGCAATATTTGCCAAGAAAGCTTTAGCACGACTGTCACATCTCTAACAGAG
JMFF009L23-           GAGGCAATTTGCAATATTTGCCAAGAAAGCTTTAGCACGACTGTCACATCTCTAACAGAG
                      ____________________________________________________________
consensus             GAGGCAATTTGCAATATTTGCCAAGAAAGCTTTAGCACGACTGTCACATCTCTAACAGAG
 
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rJMFF009L23+          CCTATCGATATATACAGCGAATGGATTGATGAATGCGAGCGAGTCAACAATGTTGAAGAT
JMFF009L23-           CCTATCGATATATACAGCGAATGGATTGATGAATGCGAGCGAGTCAACAATGTTGAAGAT
                      ____________________________________________________________
consensus             CCTATCGATATATACAGCGAATGGATTGATGAATGCGAGCGAGTCAACAATGTTGAAGAT
 
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rJMFF009L23+          GATGAATGATGATGCATGAGGGTTCCTAGTACCTTGCCCAATCTGTCTAATGCAGTGCAG
JMFF009L23-           GATGAATGATGATGCATGAGGGTTCCTAGTACCTTGCCCAATCTGTCTAATGCAGTGCAG
                      ____________________________________________________________
consensus             GATGAATGATGATGCATGAGGGTTCCTAGTACCTTGCCCAATCTGTCTAATGCAGTGCAG
 
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rJMFF009L23+          GCTTTATACTTTGCAGCAACCATAAATGTTTTGAAAACCGCCCCGAGGCTTAAACCCCTG
JMFF009L23-           GCTTTATACTTTGCAGCAACCATAAATGTTTTGAAAACCGCCCCGAGGCTTAAACCCCTG
                      ____________________________________________________________
consensus             GCTTTATACTTTGCAGCAACCATAAATGTTTTGAAAACCGCCCCGAGGCTTAAACCCCTG
 
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rJMFF009L23+          TCACTCAATAGTTCCATGTTTCACCATTTCAGTACTATGTAATGGGTTTCCTAGTTTCTT
JMFF009L23-           TCACTCAATAGTTCCATGTTTCACCATTTCAGTACTATGTAATGGGTTTCCTAGTTTCTT
                      ____________________________________________________________
consensus             TCACTCAATAGTTCCATGTTTCACCATTTCAGTACTATGTAATGGGTTTCCTAGTTTCTT
 
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rJMFF009L23+          TACTCCAATAAATTAGCTTGTCTTACAGGCTGTATATCAAGGT                 
JMFF009L23-           TACTCCAATAAATTAGCTTGTCTTACAGGCTGTATATCAAGGTACTCTAAGTTACTGTGT
                      ____________________________________________________________
consensus             TACTCCAATAAATTAGCTTGTCTTACAGGCTGTATATCAAGGTACTCTAAGTTACTGTGT