Contig 011486:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009A10Sequence593011486 (3)ref|XP_006361044.1|1e-75PREDICTED: OPA3-like protein-like [Solanum tuberosum]726011486 (3)ref|XP_009776510.1|7e-81PREDICTED: OPA3-like protein [Nicotiana sylvestris]
JMFN003G09Sequence604011486 (3)ref|XP_006361044.1|1e-75PREDICTED: OPA3-like protein-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF009A10- AAATTTCTGGGTATACCGTATATCACAAATTGACAAAACAAAAA
                      ____________________________________________________________
consensus AAATTTCTGGGTATACCGTATATCACAAATTGACAAAACAAAAA
 
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rJMFF009A10- ATGTGAGGGTATTCTACTTCTCCCGTTTTATAATTGTATGTCGTGAGGTGGCAAGAATGG
                      ____________________________________________________________
consensus ATGTGAGGGTATTCTACTTCTCCCGTTTTATAATTGTATGTCGTGAGGTGGCAAGAATGG
 
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rJMFF009A10- CTACATCCCATCCCATCCCAAGTTTGAATTTATTTTTCCCCGATCACCAAGAGCAGAGTT
                      ____________________________________________________________
consensus CTACATCCCATCCCATCCCAAGTTTGAATTTATTTTTCCCCGATCACCAAGAGCAGAGTT
 
. : . : . : . : . : . :
rJMFF009A10- TAGATTTCGTTTTCATTGTAAATGGGAAAGTAGGACCAAAGAATGGTAAAGAAATTGTGA
JMFN003G09+ CAAAGAATGGTAAAGAAATTGTGA
                      ____________________________________________________________
consensus TAGATTTCGTTTTCATTGTAAATGGGAAAGTAGGACCAAAGAATGGTAAAGAAATTGTGA
 
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rJMFF009A10- CACTTTGTGCACAGATCATGCAGGCGTTGCTGACTTTTCTTGTTCAGTCTGGGGATTTCT
JMFN003G09+ CACTTTGTGCACAGATCATGCAGGCGTTGCTGACTTTTCTTGTTCAGTCTGGGGATTTCT
JMFF009A10+ TGCACAGATCATGCAGGCGTTGCTGACTTTTCTTGTTCAGTCTGGGGATTTCT
                      ____________________________________________________________
consensus CACTTTGTGCACAGATCATGCAGGCGTTGCTGACTTTTCTTGTTCAGTCTGGGGATTTCT
 
. : . : . : . : . : . :
rJMFF009A10- GTACTTGAACATACCAGCAAGCCCTCGCCCCCTTGCTAGCTGTTCAAGCTCTTGGATTTG
JMFN003G09+ GTACTTGAACATACCAGCAAGCCCTCGCCCCCTTGCTAGCTGTTCAAGCTCTTGGATTTG
JMFF009A10+ GTACTTGAACATACCAGCAAGCCCTCGCCCCCTTGCTAGCTGTTCAAGCTCTTGGATTTG
                      ____________________________________________________________
consensus GTACTTGAACATACCAGCAAGCCCTCGCCCCCTTGCTAGCTGTTCAAGCTCTTGGATTTG
 
. : . : . : . : . : . :
rJMFF009A10- GTGTTTAAGCGCTTCTATCTCCCTCGCTAGCTCATCCTCTCGTAGCCTCACTGCCTCCAT
JMFN003G09+ GTGTTTAAGCGCTTCTATCTCCCTCGCTAGCTCATCCTCTCGTAGCCTCACTGCCTCCAT
JMFF009A10+ GTGTTTAAGCGCTTCTATCTCCCTCGCTAGCTCATCCTCTCGTAGCCTCACTGCCTCCAT
                      ____________________________________________________________
consensus GTGTTTAAGCGCTTCTATCTCCCTCGCTAGCTCATCCTCTCGTAGCCTCACTGCCTCCAT
 
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rJMFF009A10- TTCTTTCCGACGGAGTTCCTCCTTCTTAGCTTCTGATCGAGAACTTCGCTGCACTTCAAA
JMFN003G09+ TTCTTTCCGACGGAGTTCCTCCTTCTTAGCTTCTGATCGAGAACTTCGCTGCACTTCAAA
JMFF009A10+ TTCTTTCCGACGGAGTTCCTCCTTCTTAGCTTCTGATCGAGAACTTCGCTGCACTTCAAA
                      ____________________________________________________________
consensus TTCTTTCCGACGGAGTTCCTCCTTCTTAGCTTCTGATCGAGAACTTCGCTGCACTTCAAA
 
. : . : . : . : . : . :
rJMFF009A10- GATAAGAGCAGCTACACCAACCGAGAAAATAAAGAGTTCCCCAAGAAGGTCTACAGCATT
JMFN003G09+ GATAAGAGCAGCTACACCAACCGAGAAAATAAAGAGTTCCCCAAGAAGGTCTACAGCATT
JMFF009A10+ GATAAGAGCAGCTACACCAACCGAGAAAATAAAGAGTTCCCCAAGAAGGTCTACAGCATT
                      ____________________________________________________________
consensus GATAAGAGCAGCTACACCAACCGAGAAAATAAAGAGTTCCCCAAGAAGGTCTACAGCATT
 
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rJMFF009A10- TTGGACAGCTTTCTCCTCATTCAAAGGTCGTATTTCAACATCAGTTGCATGACCATATAT
JMFN003G09+ TTGGACAGCTTTCTCCTCATTCAAAGGTCGTATTTCAACATCAGTTGCATGACCATATAT
JMFF009A10+ TTGGACAGCTTTCTCCTCATTCAAAGGTCGTATTTCAACATCAGTTGCATGACCATATAT
                      ____________________________________________________________
consensus TTGGACAGCTTTCTCCTCATTCAAAGGTCGTATTTCAACATCAGTTGCATGACCATATAT
 
. : . : . : . : . : . :
rJMFF009A10- ACGTCTTTGCATTGTAGTTGTGATTCGGTGGTTTGCCTGAGCAAAGCTGACGATTAAATT
JMFN003G09+ ACGTCTTTGCATTGTAGTTGTGATTCGGTGGTTTGCCTGAGCAAAGCTGACGATTAAATT
JMFF009A10+ ACGTCTTTGCATTGTAGTTGTGATTCGGTGGTTTGCCTGAGCAAAGCTGACGATTAAATT
                      ____________________________________________________________
consensus ACGTCTTTGCATTGTAGTTGTGATTCGGTGGTTTGCCTGAGCAAAGCTGACGATTAAATT
 
. : . : . : . : . : . :
rJMFF009A10- GCGGAACGTAGGGTGTCGCCCGGCTTCCTTCTTGAGCCGACCGGCAATGGGTTTACTCAG
JMFN003G09+ GCGGAACGTAGGGTGTCGCCCGGCTTCCTTCTTGAGCCGACCGGCAATGGGTTTACTCAG
JMFF009A10+ GCGGAACGTAGGGTGTCGCCCGGCTTCCTTCTTGAGCCGACCGGCAATGGGTTTACTCAG
                      ____________________________________________________________
consensus GCGGAACGTAGGGTGTCGCCCGGCTTCCTTCTTGAGCCGACCGGCAATGGGTTTACTCAG
 
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rJMFF009A10- AGTCTTCAACGCAAGCGTTCCG
JMFN003G09+ AGTCTTCAACGCAAGCGTTCCGAGCTTCAAAAGTGGCAGTACCATTATTCACTCCTCGAA
JMFF009A10+ AGTCTTCAACGCAAGCGTTCCGAGCTTCAAAAGTGGCAGTACCATTATTCACTCCTCGAA
                      ____________________________________________________________
consensus AGTCTTCAACGCAAGCGTTCCGAGCTTCAAAAGTGGCAGTACCATTATTCACTCCTCGAA
 
. : . : . : . : . : . :
JMFN003G09+ TCAATCGTCGTCTCTGTATATCCTCGATCTTCGGATTCTA
JMFF009A10+ TCAATCGTCGTCTCTGTATATCCTCGATCTTCGGATTCTAAGCAATCACGAAACGCAGAC
                      ____________________________________________________________
consensus TCAATCGTCGTCTCTGTATATCCTCGATCTTCGGATTCTAAGCAATCACGAAACGCAGAC