Contig 011480:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006O09Sequence592011480 (3)ref|XP_011082070.1|228PREDICTED: uncharacterized protein LOC105164931 [Sesamum indicum]774010979 (2)ref|XP_004235913.1|338PREDICTED: uncharacterized protein LOC101263299 [Solanum lycopersicum]
JMFF045M24Sequence643011480 (3)ref|XP_011082070.1|270PREDICTED: uncharacterized protein LOC105164931 [Sesamum indicum]
JMSF042K23Sequence755011480 (3)ref|XP_011082070.1|204PREDICTED: uncharacterized protein LOC105164931 [Sesamum indicum]681010979 (2)ref|XP_009798217.1|267PREDICTED: uncharacterized protein LOC104244484 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF042K23+                        ACTAATAAATACAGCAAATTAAGGTGGAAAAAACTGATTACTAATCC
                      ____________________________________________________________
consensus                          ACTAATAAATACAGCAAATTAAGGTGGAAAAAACTGATTACTAATCC
 
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JMSF042K23+           TAAACAAGTAAATAAAAGCCNTAAATCAGAATTCAGTAAATCAAGACAATTGAATTGAAG
                      ____________________________________________________________
consensus             TAAACAAGTAAATAAAAGCCNTAAATCAGAATTCAGTAAATCAAGACAATTGAATTGAAG
 
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JMSF042K23+           CAAGACAGAGGTATAAACTACAGGCAATGAAATCCGAAAAAGGGAAAGTAGAAAGTGCAG
                      ____________________________________________________________
consensus             CAAGACAGAGGTATAAACTACAGGCAATGAAATCCGAAAAAGGGAAAGTAGAAAGTGCAG
 
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JMSF042K23+           AAAAGATTCAATCTTTGAGATGAGAAAGGGAAATAAAAGAGCTCACAAGCCAGTAAGGCA
JMFF045M24+                                                         AAGCCAGTAAGGCA
JMFF006O09+                                                         AAGCCAGTAAGGCA
                      ____________________________________________________________
consensus             AAAAGATTCAATCTTTGAGATGAGAAAGGGAAATAAAAGAGCTCACAAGCCAGTAAGGCA
 
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JMSF042K23+           AGGATTGAACAGTCTGGCTAACAACAAGCCAAAGAACGCCATAGCCCAGAAAAGCACAAG
JMFF045M24+           AGGATTGAACAGTCTGGCTAACAACAAGCCAAAGAACGCCATAGCCCAGAAAAGCACAAG
JMFF006O09+           AGGATTGAACAGTCTGGCTAACAACAAGCCAAAGAACGCCATAGCCCAGAAAAGCACAAG
                      ____________________________________________________________
consensus             AGGATTGAACAGTCTGGCTAACAACAAGCCAAAGAACGCCATAGCCCAGAAAAGCACAAG
 
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JMSF042K23+           CAGCGCCAACAAGAAGCACAGCCCAGGGAGGGAACTTATTGCAGGCTATCCCTGGAAGAA
JMFF045M24+           CAGCGCCAACAAGAAGCACAGCCCAGGGAGGGAACTTATTGCAGGCTATCCCTGGAAGAA
JMFF006O09+           CAGCGCCAACAAGAAGCACAGCCCAGGGAGGGAACTTATTGCAGGCTATCCCTGGAAGAA
                      ____________________________________________________________
consensus             CAGCGCCAACAAGAAGCACAGCCCAGGGAGGGAACTTATTGCAGGCTATCCCTGGAAGAA
 
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JMSF042K23+           TCCCCACATTTTCCCCAATATCATTGGCCACTCCAAGAATGGTGAGCTGCTGCTGACTGA
JMFF045M24+           TCCCCACATTTTCCCCAATATCATTGGCCACTCCAAGAATGGTGAGCTGCTGCTGACTGA
JMFF006O09+           TCCCCACATTTTCCCCAATATCATTGGCCACTCCAAGAATGGTGAGCTGCTGCTGACTGA
                      ____________________________________________________________
consensus             TCCCCACATTTTCCCCAATATCATTGGCCACTCCAAGAATGGTGAGCTGCTGCTGACTGA
 
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JMSF042K23+           AACCCAGCACTGATTTCAGAGAAGGAGAGTAGAGAGGGAAAGTGTAAGCGTTCCCGGCGG
JMFF045M24+           AACCCAGCACTGATTTCAGAGAAGGAGAGTAGAGAGGGAAAGTGTAAGCGTTCCCGGCGG
JMFF006O09+           AACCCAGCACTGATTTCAGAGAAGGAGAGTAGAGAGGGAAAGTGTAAGCGTTCCCGGCGG
                      ____________________________________________________________
consensus             AACCCAGCACTGATTTCAGAGAAGGAGAGTAGAGAGGGAAAGTGTAAGCGTTCCCGGCGG
 
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JMSF042K23+           CGATTTGAACCCAAACCGCCGCTCCAAGACCCACCCACGGTGGTCTACTCCCTTCTTTTA
JMFF045M24+           CGATTTGAACCCAAACCGCCGCTCCAAGACCCACCCACGGTGGTCTACTCCCTTCTTTTA
JMFF006O09+           CGATTTGAACCCAAACCGCCGCTCCAAGACCCACCCACGGTGGTCTACTCCCTTCTTTTA
                      ____________________________________________________________
consensus             CGATTTGAACCCAAACCGCCGCTCCAAGACCCACCCACGGTGGTCTACTCCCTTCTTTTA
 
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JMSF042K23+           GAACCACCATTCTTTTCCCACACTGTTCTTCTTGATTAACCTATGCTTCAGCTCTCCGGT
JMFF045M24+           GAACCACCATTCTTTTCCCACACTGTTCTTCTTGATTAACCTATGCTTCAGCTCTCCGGT
JMFF006O09+           GAACCACCATTCTTTTCCCACACTGTTCTTCTTGATTAACCTATGCTTCAGCTCTCCGGT
                      ____________________________________________________________
consensus             GAACCACCATTCTTTTCCCACACTGTTCTTCTTGATTAACCTATGCTTCAGCTCTCCGGT
 
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JMSF042K23+           TCTTGAGGTTTGATTAAATTGACGATTCTCAAGCCTCAAGTTCTTCTCCCTAAGGGGGAC
JMFF045M24+           TCTTGAGGTTTGATTAAATTGACGATTCTCAAGCCTCAAGTTCTTCTCCCTAAGGGGGAC
JMFF006O09+           TCTTGAGGTTTGATTAAATTGACGATTCTCAAGCCTCAAGTTCTTCTCCCTAAGGGGGAC
                      ____________________________________________________________
consensus             TCTTGAGGTTTGATTAAATTGACGATTCTCAAGCCTCAAGTTCTTCTCCCTAAGGGGGAC
 
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JMSF042K23+           AAGGGTATATTTAGATATTAACTAGCCACTGTATTGGAATATGAATTCTCCTTTTTCTTT
JMFF045M24+           AAGGGTATATTTAGATATTAACTAGCCACTGTATTGGAATATGAATTCTCCTTTTTCTTT
JMFF006O09+           AAGGGTATATTTAGATATTAACTAGCCACTGTATTGGAATATGAATTCTCCTTTTTCTTT
                      ____________________________________________________________
consensus             AAGGGTATATTTAGATATTAACTAGCCACTGTATTGGAATATGAATTCTCCTTTTTCTTT
 
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JMSF042K23+           CTTTGTTTTAGTCTCTCTGGTGGTAGGTGTTCCAACTGCCAAGAGAT             
JMFF045M24+           CTTTGTTTTAGTCTCTCTGGTGGTAGGTGTTCCAACTGCCAAGAGAT             
JMFF006O09+           CTTTGTTTTAGTCTCTCTGGTGGTAGGTGTTCCAACTGCCAAGAGATGTGGATGAAGAAT
                      ____________________________________________________________
consensus             CTTTGTTTTAGTCTCTCTGGTGGTAGGTGTTCCAACTGCCAAGAGATGTGGATGAAGAAT