Contig 011478:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006L12Sequence499011478 (2)emb|CDP16682.1|1e-74unnamed protein product [Coffea canephora]808015891ref|XP_008231136.1|7e-138PREDICTED: uridine kinase-like protein 1, chloroplastic isoform X1 [Prunus mume
JMSF034E21Sequence718011478 (2)gb|EYU45398.1|1e-122hypothetical protein MIMGU_mgv1a005489mg [Erythranthe guttata]507015092emb|CAN74540.1|3e-52hypothetical protein VITISV_035160 [Vitis vinifera]

Alignment

This contig is upended


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JMSF034E21+                                                  ANTCATCAAAAGCAGGCTTGA
                      ____________________________________________________________
consensus                                                    ANTCATCAAAAGCAGGCTTGA
 
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JMSF034E21+           CAAACTTCGCATACTGCTCAAGAACTGAGCTTATATCTCTACCCCTCTCAACAGTGTCAC
                      ____________________________________________________________
consensus             CAAACTTCGCATACTGCTCAAGAACTGAGCTTATATCTCTACCCCTCTCAACAGTGTCAC
 
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JMSF034E21+           GCCTTATTCGACGAGCAAGCCTTACATCAGCATCTGTATCAACAAAAATCTTCATATTCA
                      ____________________________________________________________
consensus             GCCTTATTCGACGAGCAAGCCTTACATCAGCATCTGTATCAACAAAAATCTTCATATTCA
 
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JMSF034E21+           TCAAATCGCGGACACGCGAGTCATGAAAAACAAGTATTCCCTCGAGGATGATTACATCAG
                      ____________________________________________________________
consensus             TCAAATCGCGGACACGCGAGTCATGAAAAACAAGTATTCCCTCGAGGATGATTACATCAG
 
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JMSF034E21+           ATGCATTTACCTGACGAAAGCTATCAGAAGATCTTTGGTGTGCTTTGAAGTCATATATTG
JMFF006L12+                                                      TTTGAAATCATATATTG
                      ____________________________________________________________
consensus             ATGCATTTACCTGACGAAAGCTATCAGAAGATCTTTGGTGTGCTTTGAAGTCATATATTG
 
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JMSF034E21+           GAACATGGACAGCTTGACCTGCTTTGAGCTTGTCTACGCACTCTACAAGCTGCTCAGTGT
JMFF006L12+           GAACTTGGACAGACTGGCCAGCTTTGAGCTTTCCAACGCACTCCAAAAGTTGCTCAGTGT
                      ____________________________________________________________
consensus             GAACTTGGACAGCTTGGCCTGCTTTGAGCTTTTCTACGCACTCTACAAGTTGCTCAGTGT
 
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JMSF034E21+           CAAAAGCATCTGGATGGTCAAAGTTATACTCATGGACACGCTTTAATTCTTCAGGTGTTA
JMFF006L12+           CAAACGCGTNTGGATGATCAAAGTTATACTCATGGACACGTTTTAACTNTTCAGAGTTTA
                      ____________________________________________________________
consensus             CAAACGCGTCTGGATGGTCAAAGTTATACTCATGGACACGTTTTAATTCTTCAGGTTTTA
 
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JMSF034E21+           ACCCACGGTAGAAAGAATCCTGATTGACAAGCAGAACGCGATGATCATGTAATTGTTGAA
JMFF006L12+           AACCNCGGTAGAAGGAATCCTGATTGACAAGAACAACGCGATGATCATGTAACTGTTGAA
                      ____________________________________________________________
consensus             ACCCACGGTAGAAGGAATCCTGATTGACAAGCAGAACGCGATGATCATGTAATTGTTGAA
 
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JMSF034E21+           TAATCATGTCGCACACCGTGGTCTTCCCAGAAGCAGTACCTCCAGAAACTCCAATGACGA
JMFF006L12+           TAATCATGTCGCACACTGTTGTCTTCCCAGAGGCAGTACCTCCGGAAACTCCGATGACGA
                      ____________________________________________________________
consensus             TAATCATGTCGCACACTGTTGTCTTCCCAGAGGCAGTACCTCCGGAAACTCCGATGACGA
 
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JMSF034E21+           AAGGCTGCTTGAGGACGGAGAAATCGGGAGGAGGAGCGGGAGAAGAAACAAAGGCAGTAG
JMFF006L12+           AGGGCTGTTTGTGGCCGGAGAAATCGGGAGGAGGAGTGAAAGAGGAAGCAAAGGCAGTAG
                      ____________________________________________________________
consensus             AGGGCTGTTTGTGGCCGGAGAAATCGGGAGGAGGAGTGGGAGAGGAAGCAAAGGCAGTAG
 
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JMSF034E21+           GAG                                                         
JMFF006L12+           GAGTTTGATTGGAAGAGCGAGGTGAAGATGCGGCAGAGAGGAGGCCGTCGAGGCGAAGTC
                      ____________________________________________________________
consensus             GAGTTTGATTGGAAGAGCGAGGTGAAGATGCGGCAGAGAGGAGGCCGTCGAGGCGAAGTC
 
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JMFF006L12+           CGGAGAAGTGTGGGCCCGACGCTGCCTCCATCACGTAATCAATCGCCGTCGTCTCCTCCG
                      ____________________________________________________________
consensus             CGGAGAAGTGTGGGCCCGACGCTGCCTCCATCACGTAATCAATCGCCGTCGTCTCCTCCG
 
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JMFF006L12+           GCATCGTTTTCCGGTAACAAACGTTGTTTTCCTTTTTCTTTTTCCTGCAATCGAATCGGC
                      ____________________________________________________________
consensus             GCATCGTTTTCCGGTAACAAACGTTGTTTTCCTTTTTCTTTTTCCTGCAATCGAATCGGC