Contig 011477:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006I23Sequence565011477 (5)ref|XP_006364174.1|125PREDICTED: uncharacterized protein LOC102585793 [Solanum tuberosum]801011477 (5)ref|XP_004243490.1|124PREDICTED: uncharacterized protein LOC101260358 [Solanum lycopersicum]
JMFF016H02Sequence553011477 (5)ref|XP_006364174.1|157PREDICTED: uncharacterized protein LOC102585793 [Solanum tuberosum]819011477 (5)ref|XP_004243490.1|154PREDICTED: uncharacterized protein LOC101260358 [Solanum lycopersicum]
JMFN008K07Sequence612011477 (5)ref|XP_004243490.1|104PREDICTED: uncharacterized protein LOC101260358 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF016H02-                                           CTGAAGTCTTTTAGTGGAAATGTTTTG
                      ____________________________________________________________
consensus                                              CTGAAGTCTTTTAGTGGAAATGTTTTG
 
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rJMFF016H02-          AATCAACATTGGTATAAATACTACATGGCAAGGCTTTGCCTTGCACCAAAACAGGAAATC
JMFN008K07+                ACATTGGTATAAATACTACATGGCAAGGCTTTGCCTTGCACCAAAACAGGAAATC
rJMFF006I23-               ACATTGGTATAAATACTACATGGCAAGGCTTTGCCTTGCACCAAAACAGGAAATC
                      ____________________________________________________________
consensus             AATCAACATTGGTATAAATACTACATGGCAAGGCTTTGCCTTGCACCAAAACAGGAAATC
 
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rJMFF016H02-          TCATATGGAACAATAGATGATGAAGCACAACTTTCTCTATACTACTATTGCAATCCAACA
JMFN008K07+           TCATATGGAACAATAGATGATGAAGCACAACTTTCTCTATACTACTATTGCAATCCAACA
rJMFF006I23-          TCATATGGAACAATAGATGATGAAGCACAACTTTCTCTATACTACTATTGCAATCCAACA
                      ____________________________________________________________
consensus             TCATATGGAACAATAGATGATGAAGCACAACTTTCTCTATACTACTATTGCAATCCAACA
 
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rJMFF016H02-          GAATTGAGACCATAACGGCACCAGTTGGATTGCCTTGGGATATTACAAGTGATATTGGGG
JMFN008K07+           GAATTGAGACCATAACGGCACCAGTTGGATTGCCTTGGGATATTACAAGTGATATTGGGG
rJMFF006I23-          GAATTGAGACCATAACGGCACCAGTTGGATTGCCTTGGGATATTACAAGTGATATTGGGG
                      ____________________________________________________________
consensus             GAATTGAGACCATAACGGCACCAGTTGGATTGCCTTGGGATATTACAAGTGATATTGGGG
 
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rJMFF016H02-          CGTGGCCTTTAGATTTCATTGAGACTTTACCGCCTTGTCTTTCCATCCCTTCTGGCGTGC
JMFN008K07+           CGTGGCCTTTAGATTTCATTGAGACTTTACCGCCTTGTCTTTCCATCCCTTCTGGCGTGC
rJMFF006I23-          CGTGGCCTTTAGATTTCATTGAGACTTTACCGCCTTGTCTTTCCATCCCTTCTGGCGTGC
                      ____________________________________________________________
consensus             CGTGGCCTTTAGATTTCATTGAGACTTTACCGCCTTGTCTTTCCATCCCTTCTGGCGTGC
 
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rJMFF016H02-          CCTCGACTCCCACAAAGCAGTCAGTTTCTTCTGTGCCAACAACGCTACATCTGCTTTTTC
JMFN008K07+           CCTCGACTCCCACAAAGCAGTCAGTTTCTTCTGTGCCAACAACGCTACATCTGCTTTTTC
rJMFF006I23-          CCTCGACTCCCACAAAGCAGTCAGTTTCTTCTGTGCCAACAACGCTACATCTGCTTTTTC
JMFF016H02+                                                  CAACGCTACATCTGCTTTTTC
JMFF006I23+                                          TGTGCCAACAACGCTACATCTGCTTTTTC
                      ____________________________________________________________
consensus             CCTCGACTCCCACAAAGCAGTCAGTTTCTTCTGTGCCAACAACGCTACATCTGCTTTTTC
 
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rJMFF016H02-          TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
JMFN008K07+           TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
rJMFF006I23-          TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
JMFF016H02+           TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
JMFF006I23+           TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
                      ____________________________________________________________
consensus             TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
 
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rJMFF016H02-          AGATGTCAGCTTTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
JMFN008K07+           AGATGTCAGC-TTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
rJMFF006I23-          AGATGTCAGC-TTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
JMFF016H02+           AGATGTCAGCTTTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
JMFF006I23+           AGATGTCAGC-TTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
                      ____________________________________________________________
consensus             AGATGTCAGC-TTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
 
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rJMFF016H02-          GCTTCAGCTTCTCGGGATTTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
JMFN008K07+           GCTTCAGCTTCTCGGGATTTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
rJMFF006I23-          GCTTCAGCTTCTCGGGATCTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
JMFF016H02+           GCTTCAGCTTCTCGGGATTTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
JMFF006I23+           GCTTCAGCTTCTCGGGATCTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
                      ____________________________________________________________
consensus             GCTTCAGCTTCTCGGGATTTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
 
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rJMFF016H02-          TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCT
JMFN008K07+           TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCT
rJMFF006I23-          TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCT
JMFF016H02+           TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCN
JMFF006I23+           TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCN
                      ____________________________________________________________
consensus             TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCT
 
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rJMFF016H02-          TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
JMFN008K07+           TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
rJMFF006I23-          TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
JMFF016H02+           TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
JMFF006I23+           TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
                      ____________________________________________________________
consensus             TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
 
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rJMFF016H02-          TAGGATGAAGAAGAACGGGTCACAGCTGCTATGCCTTCCTTGAGGTGCCAGTACAATGGT
JMFN008K07+           TAGGATGAAGAA                                                
rJMFF006I23-          TAGGATGAAGAAGAACGGGTCACAGCTGCTATGCCTTCCTTGAGGTGCCAGTACAATGGT
JMFF016H02+           TAGGATGAAGAAGAACGGGTCACAGCTGCTATGCCTTCCNTGAGGTGCCAGTACAATGGT
JMFF006I23+           TAGGATGAAGAAGAACGGGTCACAGCTGCTATGCCTTCCTTGAGGTGCCAGTACAATGGT
                      ____________________________________________________________
consensus             TAGGATGAAGAAGAACGGGTCACAGCTGCTATGCCTTCCTTGAGGTGCCAGTACAATGGT
 
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rJMFF016H02-          GGACCCANAATGTAGCCGGCCAAGCACACCGCCATCACCCCAAGCAGCGCCTTCACCACC
rJMFF006I23-          GGACCCAGAATGTAGCCGGCCAAGCACACCGCCATCACCCCAAGCAGCGCCTTCACCACC
JMFF016H02+           GGACCCAGAATGTAGCCGGCCAAGCACACCGCCATCACCCCAAGCAGCGCCTTCACCACC
JMFF006I23+           GGACCCAGAATGTAGCCGGCCAAGCACACCGCCATCACCCCAAGCAGCGCCTTCACCACC
                      ____________________________________________________________
consensus             GGACCCAGAATGTAGCCGGCCAAGCACACCGCCATCACCCCAAGCAGCGCCTTCACCACC
 
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rJMFF016H02-          CTCTGTCCACATCGTTGGTTCACCGCCATTCTCTCTCTCTCTCTCTCCCCTCTCCCTCTT
rJMFF006I23-          CTCTGTCCACATCGTTGGTTCACCGCCATTCTCTCTCTCTCTCTCT-CCCTCTCCCTCTT
JMFF016H02+           CTCTGTCCACATCGTTGGTTCACCGCCATTCTCTCTCTCTCTCTCT-CCCTCTCCCTCTT
JMFF006I23+           CTCTGTCCACATCGTTGGTTCACCGCCATTCTCTCTCTCTCTCTCT-CCCTCTCCCTCTT
                      ____________________________________________________________
consensus             CTCTGTCCACATCGTTGGTTCACCGCCATTCTCTCTCTCTCTCTCT-CCCTCTCCCTCTT
 
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rJMFF016H02-          TCTTTCTTTCTC                                                
rJMFF006I23-          TCTTTCTTTCTC                                                
JMFF016H02+           TCTTTCTTTCTCTCTCTCTCTCTTTCTCTTTCTCTGTACTCGATCTGCCGACT       
JMFF006I23+           TCTTTCTTT--CTCTCTCTCTCTTTCTCTTTCTCTGTACTCGATCTGCCGACTGGAGACT
                      ____________________________________________________________
consensus             TCTTTCTTTCTCTCTCTCTCTCTTTCTCTTTCTCTGTACTCGATCTGCCGACTGGAGACT