Contig 011472:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004K23Sequence507011472 (2)ref|XP_009597775.1|55.5PREDICTED: uncharacterized protein LOC104093688 [Nicotiana tomentosiformis]754008130 (2)ref|XP_009597775.1|127PREDICTED: uncharacterized protein LOC104093688 [Nicotiana tomentosiformis]
JMFF023P17Sequence506011472 (2)ref|XP_009597775.1|136PREDICTED: uncharacterized protein LOC104093688 [Nicotiana tomentosiformis]780008130 (2)ref|XP_006356857.1|128PREDICTED: uncharacterized protein LOC102589146 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF023P17+                                      GACGACGATCGGCTTAACGTCGTCGGAGTTGGC
                      ____________________________________________________________
consensus                                        GACGACGATCGGCTTAACGTCGTCGGAGTTGGC
 
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JMFF023P17+           CGGAAAGACGAAGCGGACGATGGAGATATCCTCGGCCCCAACCTGCGTGTAGATTTTCTG
                      ____________________________________________________________
consensus             CGGAAAGACGAAGCGGACGATGGAGATATCCTCGGCCCCAACCTGCGTGTAGATTTTCTG
 
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JMFF023P17+           TTTCTTGCCTTCGAGATCAGCCAGGAGAGCAGAAAACTTGTCGAGGCCGCGATTAGCGTA
                      ____________________________________________________________
consensus             TTTCTTGCCTTCGAGATCAGCCAGGAGAGCAGAAAACTTGTCGAGGCCGCGATTAGCGTA
 
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JMFF023P17+           CGGGTTCTTGTTGTTGTTGCTGTCTCTCCCGGATTTCTTCGATCTCCTGGGAGTCGAGCA
JMFF004K23+                                            TTTCTTCGATCTCCTGGGAGTCGAGCA
                      ____________________________________________________________
consensus             CGGGTTCTTGTTGTTGTTGCTGTCTCTCCCGGATTTCTTCGATCTCCTGGGAGTCGAGCA
 
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JMFF023P17+           TGGGCTCAGAACATCCATGTCGTCTTCGTCAACATGGAGATGAGAGCTGCCGCAAATAAA
JMFF004K23+           TGGGCTCAGAACATCCATGTCGTCTTCGTCAACATGGAGATGAGAGCTGCCGCAAATAAA
                      ____________________________________________________________
consensus             TGGGCTCAGAACATCCATGTCGTCTTCGTCAACATGGAGATGAGAGCTGCCGCAAATAAA
 
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JMFF023P17+           CGGATTGAACATGTGTATATATATAACCAACGAACTGACAAAAGCCAAAAGGGTATTCCG
JMFF004K23+           CGGATTGAACATGTGTATATATATAACCAACGAACTGACAAAAGCCAAAAGGGTATTCCG
                      ____________________________________________________________
consensus             CGGATTGAACATGTGTATATATATAACCAACGAACTGACAAAAGCCAAAAGGGTATTCCG
 
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JMFF023P17+           CAAAACACAAAATTAAGAATGTTGAGGTTGTCTGAATTGAAACTAGTTTTGGATTGACCT
JMFF004K23+           CAAAACACAAAATTAAGAATGTTGAGGTTGTCTGAATTGAAACTAGTTTTGGATTGACCT
                      ____________________________________________________________
consensus             CAAAACACAAAATTAAGAATGTTGAGGTTGTCTGAATTGAAACTAGTTTTGGATTGACCT
 
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JMFF023P17+           GATTCTGATTGGAATAGAGAGAGATGGAGGAGGAAGACAAAGCTATTTATATTACGATGA
JMFF004K23+           GATTCTGATTGGAATAGAGAGAGATGGAGGAGGAAGACAAAGCTATTTATATTACGATGA
                      ____________________________________________________________
consensus             GATTCTGATTGGAATAGAGAGAGATGGAGGAGGAAGACAAAGCTATTTATATTACGATGA
 
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JMFF023P17+           AGAATGGAGTGTTGGGGAGGGATTATTATTGAAGACTAGACTGGATCCAAGCC       
JMFF004K23+           AGAATGGAGTGTTGGGGAGGGATTATTATTGAAGACTAGACTGGATCCAAGCCAGAATAG
                      ____________________________________________________________
consensus             AGAATGGAGTGTTGGGGAGGGATTATTATTGAAGACTAGACTGGATCCAAGCCAGAATAG
 
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JMFF004K23+           TCAAATCTGCATAGGGGGGCTTGAAAACATGGGAATATTAAAAAATGGCAATAAATCCAA
                      ____________________________________________________________
consensus             TCAAATCTGCATAGGGGGGCTTGAAAACATGGGAATATTAAAAAATGGCAATAAATCCAA
 
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JMFF004K23+           TAATTAATGCATCAGAAGCTTCTTATATGTTTCGATCTTTCTTTGACTTGGTACCCCTCT
                      ____________________________________________________________
consensus             TAATTAATGCATCAGAAGCTTCTTATATGTTTCGATCTTTCTTTGACTTGGTACCCCTCT
 
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JMFF004K23+           GTATATGATTTGAATATACTCTATAGCTTATAAGAAATGGCTTGGGGAAGGGGTTTGAAT
                      ____________________________________________________________
consensus             GTATATGATTTGAATATACTCTATAGCTTATAAGAAATGGCTTGGGGAAGGGGTTTGAAT