| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004G17 | Sequence | 577 | 011470 (5) | ref|XP_009609918.1| | 9e-28 | PREDICTED: probable folate-biopterin transporter 3 isoform X2 [Nicotiana toment | 666 | 006807 (5) | |||
| JMFF010P18 | Sequence | 544 | 011470 (5) | ref|XP_009609918.1| | 3e-46 | PREDICTED: probable folate-biopterin transporter 3 isoform X2 [Nicotiana toment | 798 | 006807 (5) | ref|XP_009774529.1| | 3e-23 | PREDICTED: probable folate-biopterin transporter 3 [Nicotiana sylvestris] |
| JMSF022E23 | Sequence | 707 | 011470 (5) | ref|XP_009609918.1| | 6e-96 | PREDICTED: probable folate-biopterin transporter 3 isoform X2 [Nicotiana toment | 123 | 006807 (5) | |||
| JMSF025A16 | Sequence | 676 | 011470 (5) | ref|XP_009609918.1| | 4e-67 | PREDICTED: probable folate-biopterin transporter 3 isoform X2 [Nicotiana toment | 772 | 006807 (5) | ref|XP_009774529.1| | 1e-21 | PREDICTED: probable folate-biopterin transporter 3 [Nicotiana sylvestris] |
| JMSF028I24 | Sequence | 482 | 011470 (5) | ref|XP_009609918.1| | 6e-41 | PREDICTED: probable folate-biopterin transporter 3 isoform X2 [Nicotiana toment | 657 | 006807 (5) | ref|XP_009774529.1| | 2e-06 | PREDICTED: probable folate-biopterin transporter 3 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF022E23+ GGCGTAAACTTTCTCGTATCATGATTCCTA
____________________________________________________________
consensus GGCGTAAACTTTCTCGTATCATGATTCCTA
. : . : . : . : . : . :
JMSF022E23+ CCAAAACAACTAGAGAAGGCGGCATACTCAGAATTCCAAACACTCCCTTTGATCCGATTA
____________________________________________________________
consensus CCAAAACAACTAGAGAAGGCGGCATACTCAGAATTCCAAACACTCCCTTTGATCCGATTA
. : . : . : . : . : . :
JMSF022E23+ GATGAACTAAAAAGCCACTGATCATATACCCAATTAGTTGTCCAACCGAAGAGCTCCCTC
JMSF025A16+ CCACTGATCATATACCCAATTAGNTGTCCAACCGAAGAGCTCCCTC
____________________________________________________________
consensus GATGAACTAAAAAGCCACTGATCATATACCCAATTAGTTGTCCAACCGAAGAGCTCCCTC
. : . : . : . : . : . :
JMSF022E23+ CGCATAAGCTTTGCATGTCACCAGCCAGAGACGGATGGCTTATGCTGTTCTCGGTTACAC
JMSF025A16+ CGCATAAGCTTTGCATGTCACCAGCCAGAGACGGATGGCTTATGCTGTTCTCGGTTACAC
____________________________________________________________
consensus CGCATAAGCTTTGCATGTCACCAGCCAGAGACGGATGGCTTATGCTGTTCTCGGTTACAC
. : . : . : . : . : . :
JMSF022E23+ AGGCATCGATAATCACATCCGCTATTGCAACCCCAGCACTGCCAGCCATTAAGCATAACA
JMSF025A16+ AGGCATCGATAATCACATCCGCTATTGCAACCCCAGCACTGCCAGCCATTAAGCATAACA
____________________________________________________________
consensus AGGCATCGATAATCACATCCGCTATTGCAACCCCAGCACTGCCAGCCATTAAGCATAACA
. : . : . : . : . : . :
JMSF022E23+ AAGCAAGTTCGATCCGTAATTGGTTCATCGATAGGGTAAGCATGGCAATGACACCGAGGG
JMSF025A16+ AAGCAAGTTCGATCCGTAATTGGTTCATCGATAGGGTAAGCATGGCAATGACACCGAGGG
____________________________________________________________
consensus AAGCAAGTTCGATCCGTAATTGGTTCATCGATAGGGTAAGCATGGCAATGACACCGAGGG
. : . : . : . : . : . :
JMSF022E23+ AACCAGCAAGAATGAAGTAAGGCCTTCTTCTATATCCAGCAATGGGAAGAACATCAGTAA
JMSF025A16+ AACCAGCAAGAATGAAGTAAGGCCTTCTTCTATATCCAGCAATGGGAAGAACATCAGTAA
JMFF010P18+ ACCAGCAAGAATGAAGTAAGGCCTTCTTCTATATCCAGCAATGGGAAGAACATCAGTAA
JMSF028I24+ TATATCCAGCAATGGGAAGAACATCAGTAA
____________________________________________________________
consensus AACCAGCAAGAATGAAGTAAGGCCTTCTTCTATATCCAGCAATGGGAAGAACATCAGTAA
. : . : . : . : . : . :
JMSF022E23+ GCAAACCCCAGAGAGGCTTAACAATCCAAGGGAGAGATATAATTCCAGTAAAAATCTGAG
JMSF025A16+ GCAAACCCCAGAGAGGCTTAACAATCCAAGGGAGAGATATAATTCCAGTAAAAATCTGAG
JMFF010P18+ GCAAACCCCAGAGAGGCTTAACAATCCAAGGGAGAGATATAATTCCAGTAAAAATCTGAG
JMSF028I24+ GCAAACCCCAGAGAGGCTTAACAATCCANGGGAGAGATATAATTCCAGTAAAAATNTGAG
JMFF004G17+ ATCCAAGGGAGAGATATAATTCCAGTAAAAATCTGAG
____________________________________________________________
consensus GCAAACCCCAGAGAGGCTTAACAATCCAAGGGAGAGATATAATTCCAGTAAAAATCTGAG
. : . : . : . : . : . :
JMSF022E23+ CTTCAGAGGGCTGTAGCTTTTGCTCATCCTTCATATAGTACTGAATACTAATCCGACTCA
JMSF025A16+ CTTCAGAGGGCTGTAGCTTTTGCTCATCCTTCATATAGTACTGAATACTAATCCGACTCA
JMFF010P18+ CTTCAGAGGGCTGTAGCTTTTGCTCATCCTTCATATAGTACTGAATACTAATCCGACTCA
JMSF028I24+ CTTCAGAGGGCTGTAGCTTTTGCTCATCCTTCATATAGTACTGAATACTAATCNGACTCA
JMFF004G17+ CTTCAGAGGGCTGTAGCTTTTGCTCATCCTTCATATAGTACTGAATACTAATCCGACTCA
____________________________________________________________
consensus CTTCAGAGGGCTGTAGCTTTTGCTCATCCTTCATATAGTACTGAATACTAATCCGACTCA
. : . : . : . : . : . :
JMSF022E23+ AACCCAAACTCAACCCTTGATTGATTCCATAAACAATCACCACTGACAAAACAAAGCTCC
JMSF025A16+ AACCCAAACTCAACCCTTGATTGATTCCATAAACAATCACCACTGACAAAACAAAGCTCC
JMFF010P18+ AACCCAAACTCAACCCTTGATTGATTCCATAAACAATCACCACTGACAAAACAAAGCTCC
JMSF028I24+ AACCCAAACTCAACCCTTGATTGATTCCATAAACAATCACCACTGACAAAACAAAGCTCC
JMFF004G17+ AACCCAAACTCAACCCTTGATTGATTCCATAAACAATCACCACTGACAAAACAAAGCTCC
____________________________________________________________
consensus AACCCAAACTCAACCCTTGATTGATTCCATAAACAATCACCACTGACAAAACAAAGCTCC
. : . : . : . : . : . :
JMSF022E23+ AATGCAGAACATCACTGAGCTTCCTAAACCAATCAAACGGCCTCCACCTCCACCTCCAAG
JMSF025A16+ AATGCAGAACATCACTGAGCTTCCTAAACCAATCAAACGGCCTCCACCTCCACCTCCAAG
JMFF010P18+ AATGCAGAACATCACTGAGCTTCCTAAACCAATCAAACGGCCTCCACCTCCACCTCCAAG
JMSF028I24+ AATGCAGAACATCAGTGAGCTTCNTAAACCAATCAAACGGCCTCCACCTCCACCTCCAAG
JMFF004G17+ AATGCAGAACATCACTGAGCTTCCTAAACCAATCAAACGGCCTCCACCTCCACCTCCAAG
____________________________________________________________
consensus AATGCAGAACATCACTGAGCTTCCTAAACCAATCAAACGGCCTCCACCTCCACCTCCAAG
. : . : . : . : . : . :
JMSF022E23+ TCCAATCATTTGACTTCCTCTCCTTCTGGGATTGACCCTCAAGGAGAAAGGCCTCGTCTT
JMSF025A16+ TCCAATCATTTGACTTCCTCTCCTTCTGGGATTGACCCTCAAGGAGAAAGGCCTCGTCTT
JMFF010P18+ TCCAATCATTTGACTTCCTCTCCTTCTGGGATTGACCCTCAAGGAGAAAGGCCTCGTCTT
JMSF028I24+ TCCAATCATTTGACTTCCTCTCCTTNTGGGATTGACCCTCAAGGAGAAAGGCCTCGTCTT
JMFF004G17+ TCCAATCATTTGACTTCCTCTCCTTCTGGGATTGACCCTCAAGGAGAAAGGCCTCGTCTT
____________________________________________________________
consensus TCCAATCATTTGACTTCCTCTCCTTCTGGGATTGACCCTCAAGGAGAAAGGCCTCGTCTT
. : . : . : . : . : . :
JMSF022E23+ GGCCCATTATTCCGCC
JMSF025A16+ GGCCCATTATTCCGCCGATTCTGTTCAAGAATTGATGGAATATTAAAGACCGAATTGGGG
JMFF010P18+ GGCCCATTATTCCGCCGATTCTGTTCAAGAATTGATGGAATATTAAAGACCGAATTGGGG
JMSF028I24+ GGCCCATTATTCCGCCGATTCTGTTCAAGAATTGATGGAATATTAAAGACCGAATTGGGG
JMFF004G17+ GGCCCATTATTCCGCCGATTCTGTTCAAGAATTGATGGAATATTAAAGACCGAATTGGGG
____________________________________________________________
consensus GGCCCATTATTCCGCCGATTCTGTTCAAGAATTGATGGAATATTAAAGACCGAATTGGGG
. : . : . : . : . : . :
JMSF025A16+ AGTAATTGAGGAAACTAAACAGAACCCATC
JMFF010P18+ AGTAATTGAGGAAACTAAACAGAACCCATCGAGATTGATCTGTTATGGAGATTAGAAAAT
JMSF028I24+ AGTAATTGAGGAAACTAANCAGAACCCATCGAGATTGATCTGTTATGGAGATTAGAAAAT
JMFF004G17+ AGTAATTGAGGAAACTAAACAGAACCCATCGAGATTGATCTGTTATGGAGATTAGAAAAT
____________________________________________________________
consensus AGTAATTGAGGAAACTAAACAGAACCCATCGAGATTGATCTGTTATGGAGATTAGAAAAT
. : . : . : . : . : . :
JMFF010P18+ AGAAACGAGGAAAGTGAGGGGCCCGGAAAA
JMSF028I24+ AGAAACGAGGAAAGTGAGGGACCCGGAAAA
JMFF004G17+ AGAAACGAGGAAAGTGAGGGACCCGGAAAACAAGGTAGTTGGCTGCTTTGACTAACGTTA
____________________________________________________________
consensus AGAAACGAGGAAAGTGAGGGACCCGGAAAACAAGGTAGTTGGCTGCTTTGACTAACGTTA
. : . : . : . : . : . :
JMFF004G17+ ATGACTTCTCTTCATCGTTGCAGCATTGCCTTAGTTGGTAGGCCGGTCGTGGTAGATTGG
____________________________________________________________
consensus ATGACTTCTCTTCATCGTTGCAGCATTGCCTTAGTTGGTAGGCCGGTCGTGGTAGATTGG
. : . : . : . : . : . :
JMFF004G17+ TACCCGGGTGCCGGCCTGGTAGGTAGGCAGGCAGGCAGGCATGGATTTGGGCTAAAGCCT
____________________________________________________________
consensus TACCCGGGTGCCGGCCTGGTAGGTAGGCAGGCAGGCAGGCATGGATTTGGGCTAAAGCCT