Contig 011456:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+                                    AATCATATTAAGATGTTGACTGCTATATCAACCA
                      ____________________________________________________________
consensus                                       AATCATATTAAGATGTTGACTGCTATATCAACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          TAGATGAGCTGAATTATCCCGAGAAGACAGACGCCTATTACATCGTTAATGCCCCATACG
                      ____________________________________________________________
consensus             TAGATGAGCTGAATTATCCCGAGAAGACAGACGCCTATTACATCGTTAATGCCCCATACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          TGTTTTCAACATGCTGGAAGGCAGTGCGACCCCTATTACAAGAGAGAACAAAGTTGAAAG
                      ____________________________________________________________
consensus             TGTTTTCAACATGCTGGAAGGCAGTGCGACCCCTATTACAAGAGAGAACAAAGTTGAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          TTCAAGTTTTGCCAGGTTCCGGGAAGAATGAGCTATTGAAGATAATGGATTATGCATCCC
                      ____________________________________________________________
consensus             TTCAAGTTTTGCCAGGTTCCGGGAAGAATGAGCTATTGAAGATAATGGATTATGCATCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          TGCCACATTTCTGCAACAGAGAGGGCTCGGGCTCGGGCTCGGGCTCTTCTCGACATACCA
                      ____________________________________________________________
consensus             TGCCACATTTCTGCAACAGAGAGGGCTCGGGCTCGGGCTCGGGCTCTTCTCGACATACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          GAAATGGCAAAATTGACAACAATTGTTTCTCCTTGGACCATGCATTCCATCAGCAGCTTT
                      ____________________________________________________________
consensus             GAAATGGCAAAATTGACAACAATTGTTTCTCCTTGGACCATGCATTCCATCAGCAGCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          ACAACTACATTAAGCAGCAAGCAGAGGTGACACCAATGAAAGAGAGGTCAGTCCGTGTTG
                      ____________________________________________________________
consensus             ACAACTACATTAAGCAGCAAGCAGAGGTGACACCAATGAAAGAGAGGTCAGTCCGTGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          CCTTCCCCGAGCCAGATCCCGACGATATCAAGATCACTGAAACTATAGAGTCAGAGTTTC
                      ____________________________________________________________
consensus             CCTTCCCCGAGCCAGATCCCGACGATATCAAGATCACTGAAACTATAGAGTCAGAGTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          AGAAACTGCATGGGAATGAAACTTGTAATGTGTTCCTTGAAATTAAGATCAATGGCGATT
                      ____________________________________________________________
consensus             AGAAACTGCATGGGAATGAAACTTGTAATGTGTTCCTTGAAATTAAGATCAATGGCGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          GAAGGTTGAAAGAATGAGCAGTGGTAACGGGTGGATACAGAGTTGAGGAAGAAGCAGAAT
rJMCP019A03-                                                     TGAGGAAGAAGCAGtta
                      ____________________________________________________________
consensus             GAAGGTTGAAAGAATGAGCAGTGGTAACGGGTGGATACAGAGTTGAGGAAGAAGCAGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          TGTATGTTTGATTTGCCACCTTGAAACAAAATGATATTGATGGTGATCTTAGTTTGTATA
rJMCP019A03-          acTATGTTTGATTTGCCACCTTGAAACAAAATGATATTGATGGTGATCTTAGTTTGTATA
                      ____________________________________________________________
consensus             TGTATGTTTGATTTGCCACCTTGAAACAAAATGATATTGATGGTGATCTTAGTTTGTATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          CAGTATATTAGTCCTATATAAACTTTGCAAGGAGAGCAGATGGTTCTCTGATGCCATAAG
rJMCP019A03-          CAGTATATTAGTCCTATATAAACTTTGCAAGGAGAGCtctTGGTTCTCTGATGCCATAAG
                      ____________________________________________________________
consensus             CAGTATATTAGTCCTATATAAACTTTGCAAGGAGAGCAGATGGTTCTCTGATGCCATAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029J17+          AAAACAATTTTATTTGGACATAATGAGAGAAATAAAGTAAGAG                 
rJMCP019A03-          AAAACAATTTTATTTGGACATAATGAGAGAAATAAAGTAAGAGGTCCAATTATTTCAAAC
                      ____________________________________________________________
consensus             AAAACAATTTTATTTGGACATAATGAGAGAAATAAAGTAAGAGGTCCAATTATTTCAAAC