Contig 011453:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF025H13+                                                                   CTA
                      ____________________________________________________________
consensus                                                                      CTA
 
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rJMFF025H13+          GAAGTAGAGGATATGAAGCAACGCATTAAGAGTGGCAATATTGCATCAGACTCATCACTT
                      ____________________________________________________________
consensus             GAAGTAGAGGATATGAAGCAACGCATTAAGAGTGGCAATATTGCATCAGACTCATCACTT
 
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rJMFF025H13+          ATAAAGTTCTCAGATGATGCATTGGATGAACAAAAGCATGCCATCAGGATTGCTGACGAG
                      ____________________________________________________________
consensus             ATAAAGTTCTCAGATGATGCATTGGATGAACAAAAGCATGCCATCAGGATTGCTGACGAG
 
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rJMFF025H13+          AAAGTTGCATTAGCTATTCAGGCATATGATCTAGTAGATACTCATATTCAACAGCTTGAT
                      ____________________________________________________________
consensus             AAAGTTGCATTAGCTATTCAGGCATATGATCTAGTAGATACTCATATTCAACAGCTTGAT
 
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rJMSF009L16+                                             AGTTGCAGAGAGAGAAAATGCAGTA
rJMFF025H13+          CAGTACTTGAAAAAATTTGATGAGGAGCTCCGTAGAGTTGCAGAGAGAGAAAATGCAGTA
                      ____________________________________________________________
consensus             CAGTACTTGAAAAAATTTGATGAGGAGCTCCGTAGAGTTGCAGAGAGAGAAAATGCAGTA
 
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rJMSF009L16+          GCCACAGGTTCAACTACTTCAAATGTTGACAACAATGTGAAATCTGGAAGATCTGGTGAT
rJMFF025H13+          GCCACAGGTTCAACTACTTCAAATGTTGACAACAATGTGAAATCTGGAAGATCTGGTGAT
                      ____________________________________________________________
consensus             GCCACAGGTTCAACTACTTCAAATGTTGACAACAATGTGAAATCTGGAAGATCTGGTGAT
 
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rJMSF009L16+          AGTAGCAAAGGGGGCCGTAAAAAGACTCGTCTTGCAACAGCAACACCCGCAGCTAACCCA
rJMFF025H13+          AGTAGCAAAGGGGGCCGTAAAAAGACTCGTCTTGCAACAGCAACACCCGCAGCTAACCCA
                      ____________________________________________________________
consensus             AGTAGCAAAGGGGGCCGTAAAAAGACTCGTCTTGCAACAGCAACACCCGCAGCTAACCCA
 
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rJMSF009L16+          ACCGGTATGGATTTGGATCTACCTGTTGATCCAAATGAGCCAACATATTGCTTCTGCAAC
rJMFF025H13+          ACCGGTATGGATTTGGATCTACCTGTTGATCCAAATGAGCCAACATATTGCTTCTGCAAC
                      ____________________________________________________________
consensus             ACCGGTATGGATTTGGATCTACCTGTTGATCCAAATGAGCCAACATATTGCTTCTGCAAC
 
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rJMSF009L16+          CAAGTCAGCTACGGTGAAATGGTTGCATGTGACAATCCAAACTGCAAGATAGAATGGTTC
rJMFF025H13+          CAAGTCAGCTACGGTGAAATGGTTGCATGTGACAATCCAAACTGCAAGATAGAATGGTTC
                      ____________________________________________________________
consensus             CAAGTCAGCTACGGTGAAATGGTTGCATGTGACAATCCAAACTGCAAGATAGAATGGTTC
 
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rJMSF009L16+          CACTATGGTTGCGTTGGCCTTAAAGAGCAGCCTAAGGGTAAATGGTACTGTTCTGATTGT
rJMFF025H13+          CACTATGGTTGCGTTGGCCTTAAAGAGCAGCCTAAGGGTAAATGGTACTGTTCTGATTGT
                      ____________________________________________________________
consensus             CACTATGGTTGCGTTGGCCTTAAAGAGCAGCCTAAGGGTAAATGGTACTGTTCTGATTGT
 
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rJMSF009L16+          GCTGGAAAGCGCGGGCGTAAGAAAGGCAAGTAATAAAAGTGTGCGCAGAGGAATTGTGCC
rJMFF025H13+          GCTGGAAAGCGCGGGCGTAAGAAAGGCAAGTAATAAAAGTGTGCGCAGAGAAATTGTGCC
                      ____________________________________________________________
consensus             GCTGGAAAGCGCGGGCGTAAGAAAGGCAAGTAATAAAAGTGTGCGCAGAGGAATTGTGCC
 
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rJMSF009L16+          ATTTCAGTTCTTATTGTCGGTAGACATGGAGTAACTTTGTGTATATTATTTATTGCTTCG
rJMFF025H13+          ATTTCAGTTCTTATTGTCGGTAGACATGGAGTAACTTTGTGTGTATTATTTATTGCTTCG
                      ____________________________________________________________
consensus             ATTTCAGTTCTTATTGTCGGTAGACATGGAGTAACTTTGTGTGTATTATTTATTGCTTCG
 
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rJMSF009L16+          GTTTTAATCTCTTTGTTGCTCCCTCTGTATCTTTATCTTTATGGTGTCACATAATATCTG
rJMFF025H13+          GTTTTAATCTCTTTGTTGCTCCCTCTGTATCTTTATCTTTATGGTGTCACATAATATCTG
rJMCP016E02-                                                                     G
                      ____________________________________________________________
consensus             GTTTTAATCTCTTTGTTGCTCCCTCTGTATCTTTATCTTTATGGTGTCACATAATATCTG
 
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rJMSF009L16+          TAAGAGGTTATGTTAATGTGTAGTAGTTTT                              
rJMFF025H13+          TAAGAGGTTATGTTAATGTGTAGTAGTTTTTGTAAGAGAAGGTTTAGT            
rJMCP016E02-          TAAGAGGTTATGTTAATGTGTAGTAGTTTTTGTAAGAGAAGGTTTAGTTGAAAACATGAA
                      ____________________________________________________________
consensus             TAAGAGGTTATGTTAATGTGTAGTAGTTTTTGTAAGAGAAGGTTTAGTTGAAAACATGAA
 
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rJMCP016E02-          ATGAAGCACCCATATTTGTATTAACTATTGTTGCCCCTAATGTTGTATTTGAGTTTTCTC
                      ____________________________________________________________
consensus             ATGAAGCACCCATATTTGTATTAACTATTGTTGCCCCTAATGTTGTATTTGAGTTTTCTC