Contig 011452:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP009F08Sequence623011452 (4)ref|XP_009627300.1|246PREDICTED: uncharacterized protein LOC104117877 [Nicotiana tomentosiformis]
JMCP010H06Sequence271011452 (4)ref|XP_009627300.1|117PREDICTED: uncharacterized protein LOC104117877 [Nicotiana tomentosiformis]
JMFN018D04Sequence478011452 (4)ref|XP_009627300.1|100PREDICTED: uncharacterized protein LOC104117877 [Nicotiana tomentosiformis]
JMSF025F17Sequence657006328 (3)ref|XP_006354871.1|7e-81PREDICTED: uncharacterized protein LOC102593823 isoform X1 [Solanum tuberosum]765011452 (4)ref|XP_009627300.1|275PREDICTED: uncharacterized protein LOC104117877 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFN018D04+                      GGATGACAAAGCCAAAGCCAAGAAGCATAATTGCATTGCAGACACGAGA
rJMSF025F17-                                                                     A
                      ____________________________________________________________
consensus                        GGATGACAAAGCCAAAGCCAAGAAGCATAATTGCATTGCAGACACGAGA
 
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JMFN018D04+           GTGAACTCACAAGCAAAATCGGAAATCTAATAAAATATTACAAT-GTACTATCAATTACA
rJMSF025F17-          GTGAACTCACAAGCAAAATCGGAAATCTAATAAAATATTACAATGGTACTATCAATTACA
                      ____________________________________________________________
consensus             GTGAACTCACAAGCAAAATCGGAAATCTAATAAAATATTACAATGGTACTATCAATTACA
 
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JMFN018D04+           TAGTTTACATGATCAATCGTGGCAGAGTGACTTGATATGGTTAGACATCATATAATCACA
rJMSF025F17-          TAGTTTACATGATCAATCGTGGCAGAGTGACTTGATATGGTTAGACATCATATAATCACA
                      ____________________________________________________________
consensus             TAGTTTACATGATCAATCGTGGCAGAGTGACTTGATATGGTTAGACATCATATAATCACA
 
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JMFN018D04+           TATGAACAAAGTTGAACCCTCAGAGAGAATCAGAATGCAACACAGAAACACTGACCTAAA
rJMSF025F17-          TATGAACAAAGTTGAACCCTCAGAGAGAATCAGAATGCAACACAGAAACACTGACCTAAA
                      ____________________________________________________________
consensus             TATGAACAAAGTTGAACCCTCAGAGAGAATCAGAATGCAACACAGAAACACTGACCTAAA
 
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JMFN018D04+           CAAGTTACGCAATAATCATCAAGGCTTCAAGTCTTCAACAACCAGGTATATCATCATCCT
rJMSF025F17-          CAAGTTACGCAATAATCATCAAGGCTTCAAGTCTTCAACAACCAGGTATATCATCATCCT
                      ____________________________________________________________
consensus             CAAGTTACGCAATAATCATCAAGGCTTCAAGTCTTCAACAACCAGGTATATCATCATCCT
 
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JMFN018D04+           CAGAACTAAAACACGTGGCATGTAAAACAGCCGCTCAAGGAGCTGGTTTGGCGAGTCCTG
rJMSF025F17-          CAGAACTAAAACACGTGGCATGTAAAACAGCCGCTCAAGGAGCTGGTTTGGCGAGTCCTG
                      ____________________________________________________________
consensus             CAGAACTAAAACACGTGGCATGTAAAACAGCCGCTCAAGGAGCTGGTTTGGCGAGTCCTG
 
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JMFN018D04+           CGAAAGGATAAGGCTCTCTGGGGATTCCTCATAGCTTCATGACCCTGGCCAGCCAGCATT
rJMSF025F17-          CGAAAGGATAAGGCTCTCTGGGGATTCCTCATAGCTTCATGACCCTGGCCAGCCAGCATT
                      ____________________________________________________________
consensus             CGAAAGGATAAGGCTCTCTGGGGATTCCTCATAGCTTCATGACCCTGGCCAGCCAGCATT
 
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JMFN018D04+           GAGCTTCTCATTTCTTGTGCCTTTTTCTGTGCAGATCTCAATTTGTTCATTATCTTGTCC
rJMSF025F17-          GAGCTTCTCATTTCTTGTGCCTTTTTCTGTGCAGATCTCAATTTGTTCATTATCTTGTCC
                      ____________________________________________________________
consensus             GAGCTTCTCATTTCTTGTGCCTTTTTCTGTGCAGATCTCAATTTGTTCATTATCTTGTCC
 
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JMFN018D04+           ATGGAGGATG                                                  
rJMSF025F17-          ATGGAGGATGATCTCTTTTTCTCCAGCTTCATCTCAAGTTTCCGGATTGCTGCCTCAGCT
                      ____________________________________________________________
consensus             ATGGAGGATGATCTCTTTTTCTCCAGCTTCATCTCAAGTTTCCGGATTGCTGCCTCAGCT
 
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rJMSF025F17-          TTTGCCTTTTGAAGGTTCTCCCACGCGGTTATTCTGGCTTCTTCCCTCTTGATCTTGGAA
rJMCP009F08+                                               CTTCTTCCCTCTTGATCTTGGAA
                      ____________________________________________________________
consensus             TTTGCCTTTTGAAGGTTCTCCCACGCGGTTATTCTGGCTTCTTCCCTCTTGATCTTGGAA
 
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rJMSF025F17-          ATAGACTTTGTTGTTTCTGAAACTTCCCAGCTAGAAGACCGTATTTCTACAGCTTTCCTT
rJMCP009F08+          ATAGACTTTGTTGTTTCTGAAACTTCCCAGCTAGAAGACCGTATTTCTACAGCTTTCCTT
                      ____________________________________________________________
consensus             ATAGACTTTGTTGTTTCTGAAACTTCCCAGCTAGAAGACCGTATTTCTACAGCTTTCCTT
 
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rJMSF025F17-          CTCCAGTCATCAATACTTCCCCAGCTCCTCCCAGGGATTCGAGACCTGTGTTTCTTTGAC
rJMCP009F08+          CTCCAGTCATCAATACTTCCCCAGCTCCTCCCAGGGATTCGAGACCTGTGTTTCTTTGAC
                      ____________________________________________________________
consensus             CTCCAGTCATCAATACTTCCCCAGCTCCTCCCAGGGATTCGAGACCTGTGTTTCTTTGAC
 
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rJMSF025F17-          CACCTTGTTACAGTAACCCTCTCATCAACTGGAACATCCCTGACTTCTGCTTTAGAGGAA
rJMCP009F08+          CACCTTGTTACAGTAACCCTCTCATCAACTGGAACATCCCTGACTTCTGCTTTAGAGGAA
                      ____________________________________________________________
consensus             CACCTTGTTACAGTAACCCTCTCATCAACTGGAACATCCCTGACTTCTGCTTTAGAGGAA
 
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rJMSF025F17-          TGGACACCCAACACTTCCACAATTGGTAATACAGACGGTACTGG                
rJMCP009F08+          TGGACACCCAACACTTCCACAATTGGTAATACAGACGGTACTGGGGGAGAGGAAGATGAC
                      ____________________________________________________________
consensus             TGGACACCCAACACTTCCACAATTGGTAATACAGACGGTACTGGGGGAGAGGAAGATGAC
 
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rJMCP009F08+          TGAGGACTAGCCTCGGGGCTCATTTGAGTTGCCATATCCCTCCTGGAAACAACACGAGAT
                      ____________________________________________________________
consensus             TGAGGACTAGCCTCGGGGCTCATTTGAGTTGCCATATCCCTCCTGGAAACAACACGAGAT
 
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rJMCP010H06+                              ATCAaaGTTggggagATCTTGGGGAGCGGGTAACGAGGCT
rJMCP009F08+          ATATTGCTGGCTGCATCATTATCATTGTTCCCCTCATCTTGGGGAGCGGGTAACGAGGCT
                      ____________________________________________________________
consensus             ATATTGCTGGCTGCATCATTATCATTGTTCCCCTCATCTTGGGGAGCGGGTAACGAGGCT
 
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rJMCP010H06+          AAGCTGATCAATTCAGAAAATCCATGAATACTAATTGACCTTGCCATGCATGGCTCTGTA
rJMCP009F08+          AAGCTGATCAATTCAGAAAATCCATGAATACTAATTGACCTTGCCATGCATGGCTCTGTA
                      ____________________________________________________________
consensus             AAGCTGATCAATTCAGAAAATCCATGAATACTAATTGACCTTGCCATGCATGGCTCTGTA
 
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rJMCP010H06+          CAAGCAGGAAAGTTTTCACCAACTCCATGACCTCCACAATGAATAGATAAACCATTGGCT
rJMCP009F08+          CAAGCAGGAAAGTTTTCACCAACTCCATGACCTCCACAATGAATAGATAAACCATTGGCT
                      ____________________________________________________________
consensus             CAAGCAGGAAAGTTTTCACCAACTCCATGACCTCCACAATGAATAGATAAACCATTGGCT
 
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rJMCP010H06+          ACCATCACTCCGGTGGAAAAAGGAGAGCTTGCTAATAAATTTATGTTATTTTCTCCTTTC
rJMCP009F08+          ACCATCACTCCGGTGGAAAAAGGAGAGCTTGCTAATAAATTTATGTTATTTTCTCCTTTC
                      ____________________________________________________________
consensus             ACCATCACTCCGGTGGAAAAAGGAGAGCTTGCTAATAAATTTATGTTATTTTCTCCTTTC
 
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rJMCP010H06+          GAGACAGGAAGCGCTGGAGAATATAACGAAaacatacgtGCCCCAGGAGGC         
rJMCP009F08+          GAGACAGGAAGCGCTGGAGAATATAACGAATTGTATGCAGCCCCAGGAGGCCCAAGTGGT
                      ____________________________________________________________
consensus             GAGACAGGAAGCGCTGGAGAATATAACGAATTGTATGCAGCCCCAGGAGGCCCAAGTGGT