Contig 011449:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF053A17Sequence635011449 (2)gb|KJB17219.1|2e-133hypothetical protein B456_002G055400 [Gossypium raimondii]861011449 (2)emb|CAB46084.1|9e-160fructose-1,6-bisphosphatase [Pisum sativum]

Alignment

This contig is upended


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JMSF053A17-                      TGGAGCAAGGGTTTAGAGGAATCGGGAGAGATGGATCACGCGGCGGACG
                      ____________________________________________________________
consensus                        TGGAGCAAGGGTTTAGAGGAATCGGGAGAGATGGATCACGCGGCGGACG
 
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JMSF053A17-           CTCACCGGACGGACCTGATGACCATAACGAGGTTTGTGCTGAACGAGCAGACGAAGCACC
                      ____________________________________________________________
consensus             CTCACCGGACGGACCTGATGACCATAACGAGGTTTGTGCTGAACGAGCAGACGAAGCACC
 
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JMSF053A17-           CGGAGTCTCGTGGCGACTTCACCATCCTCCTCAGCCACATTGTCCTTGGCTGCAAATTCG
                      ____________________________________________________________
consensus             CGGAGTCTCGTGGCGACTTCACCATCCTCCTCAGCCACATTGTCCTTGGCTGCAAATTCG
 
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JMSF053A17-           TCTGCACTGCCGTCAACAAGGCTGGTTTGGCGAAACTCATAGGGCTTGCTGGTGAGACCA
                      ____________________________________________________________
consensus             TCTGCACTGCCGTCAACAAGGCTGGTTTGGCGAAACTCATAGGGCTTGCTGGTGAGACCA
 
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JMSF053A17-           ATGTACAGGGTGAAGAACAAAAGAAACTGGATGTACTCTCAAATGAAGTTTTTATCAAAG
                      ____________________________________________________________
consensus             ATGTACAGGGTGAAGAACAAAAGAAACTGGATGTACTCTCAAATGAAGTTTTTATCAAAG
 
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JMSF053A17-           CCTTGGTTAGCAGTGGTCGAACATCCATTCTAGTCTCTGAGGAAGATGACGAGGCAACCT
rJMSF053A17+                                                 AGGAAGATGACGAGGCAACCT
                      ____________________________________________________________
consensus             CCTTGGTTAGCAGTGGTCGAACATCCATTCTAGTCTCTGAGGAAGATGACGAGGCAACCT
 
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JMSF053A17-           TTGTGAAGCCACCATTGCGGGGAAAATATTGTGTTGTTTTCGACCCATTGGATGGATCTT
rJMSF053A17+          TTGTGAAGCCACCATTGCGGGGAAAATATTGTGTTGTTTTCGACCCATNGGATGGATCTT
                      ____________________________________________________________
consensus             TTGTGAAGCCACCATTGCGGGGAAAATATTGTGTTGTTTTCGACCCATTGGATGGATCTT
 
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JMSF053A17-           CCAACATTGATTGTGGTGTTTCTATTGGAACTATTTTTGGGATTTACATGATCAAAGATA
rJMSF053A17+          CCAACATTGATTGTGGTGTTTCTATTGGAACTATTTTTGGGATTTACATGATCAAAGATA
                      ____________________________________________________________
consensus             CCAACATTGATTGTGGTGTTTCTATTGGAACTATTTTTGGGATTTACATGATCAAAGATA
 
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JMSF053A17-           ATCATGAACCAGAATTAAGTGATGTTTTGCAACCTGGGAAGAATATGTTAGCTGCTGGCT
rJMSF053A17+          ATCATGAACCAGAATTAAGTGATGTTTTGCAACCTGGGAAGAATATGTTAGCTGCTGGCT
                      ____________________________________________________________
consensus             ATCATGAACCAGAATTAAGTGATGTTTTGCAACCTGGGAAGAATATGTTAGCTGCTGGCT
 
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JMSF053A17-           ACTGCATGTATGGGAGCTCCTGCACGTTTGTGTTGAGCACTGGATCTGGAGTTAATGGCT
rJMSF053A17+          ACTGCATGTATGGGAGCTCCTGCACGTTTGTGTTGAGCACTGGATCTGGAGTTAATGGCT
                      ____________________________________________________________
consensus             ACTGCATGTATGGGAGCTCCTGCACGTTTGTGTTGAGCACTGGATCTGGAGTTAATGGCT
 
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JMSF053A17-           TTACCCTTGATCCATCACTAGGGGAATTCATACTAACTCATCCAGA              
rJMSF053A17+          TTACCCTTGATCCATCACTAGGGGAATTCATACTAACTCATCCAGATATCAAGATCCCAA
                      ____________________________________________________________
consensus             TTACCCTTGATCCATCACTAGGGGAATTCATACTAACTCATCCAGATATCAAGATCCCAA
 
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rJMSF053A17+          AGAAAGGAAAGATCTATTCTGTGAATGAAGGAAATGCTAAAAACTGGGATGGTCCAACAG
                      ____________________________________________________________
consensus             AGAAAGGAAAGATCTATTCTGTGAATGAAGGAAATGCTAAAAACTGGGATGGTCCAACAG
 
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rJMSF053A17+          CTAAATTTGTTGAAAACTGCAAGTTCCCTAAAGATGGTTCATCACCAAAGTCTCTAAGAT
                      ____________________________________________________________
consensus             CTAAATTTGTTGAAAACTGCAAGTTCCCTAAAGATGGTTCATCACCAAAGTCTCTAAGAT
 
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rJMSF053A17+          ACATCGGAAGCATGGTTGCGGATGTTCATCGCACATTACTTTATGGTGGCATCTTCTTGT
                      ____________________________________________________________
consensus             ACATCGGAAGCATGGTTGCGGATGTTCATCGCACATTACTTTATGGTGGCATCTTCTTGT
 
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rJMSF053A17+          ACCCTGCTGATAAGAAAAGTCCCAATGGGAAGCTGCGGGTTCTATATGAAGTGTTTCCAA
                      ____________________________________________________________
consensus             ACCCTGCTGATAAGAAAAGTCCCAATGGGAAGCTGCGGGTTCTATATGAAGTGTTTCCAA
 
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rJMSF053A17+          TGTCATTCTTAATGGAGCAGGCTGGAGGCCAAGCATTTACTGGCAAACTGCGGGCCCTTG
                      ____________________________________________________________
consensus             TGTCATTCTTAATGGAGCAGGCTGGAGGCCAAGCATTTACTGGCAAACTGCGGGCCCTTG
 
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rJMSF053A17+          ACTTGGTTCCAGAGAAGATCCATGAGCGTTCTCCCATATTTCTGGGCAGTTATGATGATG
                      ____________________________________________________________
consensus             ACTTGGTTCCAGAGAAGATCCATGAGCGTTCTCCCATATTTCTGGGCAGTTATGATGATG
 
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rJMSF053A17+          TTGAGGCCATTAAAGCACTTTATGCTGCTGAAGACTAAACGGAACTGAAACCTCCGATCC
                      ____________________________________________________________
consensus             TTGAGGCCATTAAAGCACTTTATGCTGCTGAAGACTAAACGGAACTGAAACCTCCGATCC
 
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rJMSF053A17+          CTCTGCAATCTCCACATACCAGGCCCAAGCTTTATGATACTGCGTAATTGCAATTTCAAG
                      ____________________________________________________________
consensus             CTCTGCAATCTCCACATACCAGGCCCAAGCTTTATGATACTGCGTAATTGCAATTTCAAG
 
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rJMSF053A17+          TATATAATTTGTGCTTATAAACCTTATTATCTTCAGCAATTACACACTTATTGCAGCTAG
                      ____________________________________________________________
consensus             TATATAATTTGTGCTTATAAACCTTATTATCTTCAGCAATTACACACTTATTGCAGCTAG