Contig 011448:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014L12Sequence566007335 (5)ref|XP_009369580.1|1e-39PREDICTED: probable inactive receptor-like protein kinase At3g56050 [Pyrus x br673011448 (2)emb|CBI15912.3|4e-79unnamed protein product [Vitis vinifera]
JMSF052P20Sequence660007335 (5)ref|XP_002278392.1|2e-55PREDICTED: inactive receptor-like serine/threonine-protein kinase At2g40270 [Vi760011448 (2)emb|CBI15912.3|4e-80unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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rJMFF014L12+                                      ATTAAGGAATCAGAGCACTTGGATTGGTCAAT
rJMSF052P20+                              ATCTGCATATTAAGGAATCAGAGCACTTGGATTGGTCAAT
                      ____________________________________________________________
consensus                                 ATCTGCATATTAAGGAATCAGAGCACTTGGATTGGTCAAT
 
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rJMFF014L12+          GCGGTTGCGAATAGCCATGGGCATTGCTTACTGCCTCGAGTATATGTACCAGCTTAACCC
rJMSF052P20+          GCGGTTGCGAATAGCCATGGGCATTGCTTACTGCCTCGAGTATATGTACCAGCTTAACCC
                      ____________________________________________________________
consensus             GCGGTTGCGAATAGCCATGGGCATTGCTTACTGCCTCGAGTATATGTACCAGCTTAACCC
 
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rJMFF014L12+          TCCCATACTTCACAGAAACCTGCAATCTTCTTCTGTTTACCTAACAGAAGACTATGCAGC
rJMSF052P20+          TCCCATACTTCACAGAAACCTGCAATCTTCTTCTGTTTACCTAACAGAAGACTATGCAGC
                      ____________________________________________________________
consensus             TCCCATACTTCACAGAAACCTGCAATCTTCTTCTGTTTACCTAACAGAAGACTATGCAGC
 
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rJMFF014L12+          AAAGTTATCAGATTTCAACTTCTGGAATGAAGCAAAGAAAGGGGAATCAGATCTTCCATC
rJMSF052P20+          AAAGTTATCAGATTTCAACTTCTGGAATGAAGCAAAGAAAGGGGAATCAGATCTTCCATC
                      ____________________________________________________________
consensus             AAAGTTATCAGATTTCAACTTCTGGAATGAAGCAAAGAAAGGGGAATCAGATCTTCCATC
 
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rJMFF014L12+          ACCTGATGAAGATGAAGATGAAGACTGCATTTTTAGCTTTGGGTTGATACTATTTGAGAT
rJMSF052P20+          ACCTGATGAAGATGAAGATGAAGACTGCATTTTTAGCTTTGGGTTGATACTATTTGAGAT
                      ____________________________________________________________
consensus             ACCTGATGAAGATGAAGATGAAGACTGCATTTTTAGCTTTGGGTTGATACTATTTGAGAT
 
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rJMFF014L12+          GATTACTGGTAAGCTTCTTCCATATTCTGATGGGAATGGCTCCCTTGAAAACTGGGTAAC
rJMSF052P20+          GATTACTGGTAAGCTTCTTCCATATTCTGATGGGAATGGCTCCCTTGAAAACTGGGTAAC
                      ____________________________________________________________
consensus             GATTACTGGTAAGCTTCTTCCATATTCTGATGGGAATGGCTCCCTTGAAAACTGGGTAAC
 
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rJMFF014L12+          AATCTGCTTGAAGGAAGAGAAGCCCCACACAGAAATGGTGGATCCTACACTGAAATCGTA
rJMSF052P20+          AATCTGCTTGAAGGAAGAGAAGCCCCACACAGAAATGGTGGATCCTACACTGAAATCGTA
                      ____________________________________________________________
consensus             AATCTGCTTGAAGGAAGAGAAGCCCCACACAGAAATGGTGGATCCTACACTGAAATCGTA
 
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rJMFF014L12+          CGGGGAGAAAGAGCTCGAGAAACTGTTTGCTCTGATGAAAGATTGCATCCTCTCAGACCC
rJMSF052P20+          CGGGGAGAAAGAGCTCGAGAAACTGTTTGCTCTGATGAAAGATTGCATCCTCTCAGACCC
                      ____________________________________________________________
consensus             CGGGGAGAAAGAGCTCGAGAAACTGTTTGCTCTGATGAAAGATTGCATCCTCTCAGACCC
 
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rJMFF014L12+          AACACAAAGACCAGGTGTGAAGGAGGTTGTTTCCAGGTTGAAGGAGATCACAGCTATGGG
rJMSF052P20+          AACACAAAGACCAGGTGTGGAGGAGGTTGTTTCCAGGTTGAAGGAGATCACAGCTATGGG
                      ____________________________________________________________
consensus             AACACAAAGACCAGGTGTGGAGGAGGTTGTTTCCAGGTTGAAGGAGATCACAGCTATGGG
 
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rJMFF014L12+          TCCCGATGGTGCAATGCCAAAAACTTCGCCTCTTTGGTGGGCTGAGCTCGAGATTTTATC
rJMSF052P20+          TCCCGATGGTGCAATGCCAAAAACTTCGCCTCTTTGGTGGGCTGAGCTCGAGATTTTATC
                      ____________________________________________________________
consensus             TCCCGATGGTGCAATGCCAAAAACTTCGCCTCTTTGGTGGGCTGAGCTCGAGATTTTATC
 
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rJMFF014L12+          CACAGATTCAATCTAAGACGGTTTAAATTACAGCAAAACTCACCTTAACCAATCTCCAGA
rJMSF052P20+          CACAGATTCAATCTAAGACGGTTTAAATTACAGCAAAACTCACCTTAACCAATCTCCAGA
                      ____________________________________________________________
consensus             CACAGATTCAATCTAAGACGGTTTAAATTACAGCAAAACTCACCTTAACCAATCTCCAGA
 
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rJMFF014L12+          CGCATGTTGTCATTCTTATTGTTATTATTACTGTTACTATT                   
rJMSF052P20+          CGCATGTTGTCATTCTTATTGTTATTATTACTGTTACTATTATTTTTAACCTTTTGATTT
                      ____________________________________________________________
consensus             CGCATGTTGTCATTCTTATTGTTATTATTACTGTTACTATTATTTTTAACCTTTTGATTT
 
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rJMSF052P20+          CCCTCCCCTGCCAACTTGACTCCATCAAGATTCAAGAATGGTGCTGATTGATTGATTCTT
                      ____________________________________________________________
consensus             CCCTCCCCTGCCAACTTGACTCCATCAAGATTCAAGAATGGTGCTGATTGATTGATTCTT