Contig 011445:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012E01Sequence323011445 (6)ref|XP_006368095.1|207PREDICTED: uncharacterized protein LOC102600694, partial [Solanum tuberosum]756011445 (6)ref|XP_002323885.1|1e-133hypothetical protein POPTR_0017s12590g [Populus trichocarpa] gb|EEF04018.1| hypo
JMSF051L19Sequence688011445 (6)ref|XP_007032664.1|4e-84Homoserine O-acetyltransferase isoform 4 [Theobroma cacao] gb|EOY03590.1| Homose733011445 (6)ref|XP_002323885.1|2e-129hypothetical protein POPTR_0017s12590g [Populus trichocarpa] gb|EEF04018.1| hypo
JMSF052M18Sequence691011445 (6)ref|XP_010258178.1|275PREDICTED: uncharacterized protein LOC104598014 [Nelumbo nucifera]866011445 (6)ref|XP_002323885.1|2e-142hypothetical protein POPTR_0017s12590g [Populus trichocarpa] gb|EEF04018.1| hypo

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF051L19- GAACCGTAATCTTGATCCACCTTCCCTTCTGGGTATCAACGGCATCTATCTCAGTAAAAA
JMSF052M18- TCCACCTTCCCTTCTGGGTATCAACGGCATCTATCTCAGTAAAAA
                      ____________________________________________________________
consensus GAACCGTAATCTTGATCCACCTTCCCTTCTGGGTATCAACGGCATCTATCTCAGTAAAAA
 
. : . : . : . : . : . :
JMSF051L19- TGGCTGCAGCCATGGCTGTACACTCGCCAAAAACACCTCTTATGCAGAGCCCATCATCTC
JMSF052M18- TGGCTGCAGCCATGGCTGTACACTCGCCAAAAACACCTCTTATGCAGAGCCCATCATCTC
                      ____________________________________________________________
consensus TGGCTGCAGCCATGGCTGTACACTCGCCAAAAACACCTCTTATGCAGAGCCCATCATCTC
 
. : . : . : . : . : . :
JMSF051L19- TCAAGGACCTAAACTCCAGTTTCATTTGTGGGTCGCCATTAAAGAGCCTGTCTTTACAGA
JMSF052M18- TCAAGGACCTAAACTCCAGTTTCATTTGTGGGTCGCCATTAAAGAGCCTGTCTTTACAGA
                      ____________________________________________________________
consensus TCAAGGACCTAAACTCCAGTTTCATTTGTGGGTCGCCATTAAAGAGCCTGTCTTTACAGA
 
. : . : . : . : . : . :
JMSF051L19- TGCTGCAACCAAGAAGAAGCAGCGGGAGACACGGTGTTAGCTTGGTCATAACCTCCGCCG
JMSF052M18- TGCTGCAACCAAGAAGAAGCAGCGGGAGACACGGTGTTAGCTTGGTCATAACCTCCGCCG
                      ____________________________________________________________
consensus TGCTGCAACCAAGAAGAAGCAGCGGGAGACACGGTGTTAGCTTGGTCATAACCTCCGCCG
 
. : . : . : . : . : . :
JMSF051L19- TTACTGGAAGCTCTCGATCGGCGGCCAAGACCGTCAAGAACAGCGGCGGTGATGGTGGCG
JMSF052M18- TTACTGGAAGCTCTCGATCGGCGGCCAAGACCGTCAAGAACAGCGGCGGTGATGGTGGCG
                      ____________________________________________________________
consensus TTACTGGAAGCTCTCGATCGGCGGCCAAGACCGTCAAGAACAGCGGCGGTGATGGTGGCG
 
. : . : . : . : . : . :
JMSF051L19- GCGGTGGGAGGTTTTACCTGAATTTCACTGGGTTTCCTTTTCCCCTCGGCCCTTTCCTCA
JMSF052M18- GCGGTGGGAGGTTTTACCTGAATTTCACTGGGTTTCCTTTTCCCCTCGGCCCTTTCCTCA
                      ____________________________________________________________
consensus GCGGTGGGAGGTTTTACCTGAATTTCACTGGGTTTCCTTTTCCCCTCGGCCCTTTCCTCA
 
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JMSF051L19- ACCGGCGCACCATTAGAACTGAGGTAGTGAAAGACTGCATTTGGTTATTTGAACAAGAAC
JMSF052M18- ACCGGCGCACCATTAGAACTGAGGTAGTGAAAGACTGCATTTGGTTATTTGAACAAGAAC
                      ____________________________________________________________
consensus ACCGGCGCACCATTAGAACTGAGGTAGTGAAAGACTGCATTTGGTTATTTGAACAAGAAC
 
. : . : . : . : . : . :
JMSF051L19- AAGCACTGGGCTTCAGCAGTGTCTCAACAAACATCAGAATGACTGTAATCAAACTTAAAT
JMSF052M18- AAGCACTGGGCTTCAGCAGTGTCTCAACAAACATCAGAATGACTGTAATCAAACTTAAAT
                      ____________________________________________________________
consensus AAGCACTGGGCTTCAGCAGTGTCTCAACAAACATCAGAATGACTGTAATCAAACTTAAAT
 
. : . : . : . : . : . :
JMSF051L19- CGGGCGGGCTATGGATTCATGCACCGATTGCACCAACCAAAGAGTGTATTCAGCTTGTGA
JMSF052M18- CGGGCGGGCTATGGATTCATGCACCGATTGCACCAACCAAAGAGTGTATTCAGCTTGTGA
                      ____________________________________________________________
consensus CGGGCGGGCTATGGATTCATGCACCGATTGCACCAACCAAAGAGTGTATTCAGCTTGTGA
 
. : . : . : . : . : . :
JMSF051L19- AAGAGTTGGGATATCCCGTGGAATATATTGTGCTGCCTACGTTTGCATATGAGCATAAAA
JMSF052M18- AAGAGTTGGGATATCCCGTGGAATATATTGTGCTGCCTACGTTTGCATATGAGCATAAAA
                      ____________________________________________________________
consensus AAGAGTTGGGATATCCCGTGGAATATATTGTGCTGCCTACGTTTGCATATGAGCATAAAA
 
. : . : . : . : . : . :
JMSF051L19- TATTTGTTGGCCCGTTCTCGAGGAAGTTTCCACGGGCACAGGTATGGGTGGCACCGAGGC
JMSF052M18- TATTTGTTGGCCCGTTCTCGAGGAAGTTTCCACGGGCACAGGTATGGGTGGCACCGAGGC
JMSF012E01- AAGTTTCCACGGGCACAGGTATGGGTGGCACCGAGGC
                      ____________________________________________________________
consensus TATTTGTTGGCCCGTTCTCGAGGAAGTTTCCACGGGCACAGGTATGGGTGGCACCGAGGC
 
. : . : . : . : . : . :
JMSF051L19- AATGGAGTNGGCCTTTAAATCTTCCACT
JMSF052M18- AATGGAGTGGGCCTTTAANTCTTCCACTCGAGTTCTTTGGGAT
JMSF012E01- AATGGAGTTGGCCTTTAAATCTTCCACTCGAGTTCTTTGGGATATTTCGTGCCAAAACCT
rJMSF052M18+ TCTTTGGGATATTTCGTGCCAAAACCT
                      ____________________________________________________________
consensus AATGGAGTTGGCCTTTAAATCTTCCACTCGAGTTCTTTGGGATATTTCGTGCCAAAACCT
 
. : . : . : . : . : . :
JMSF012E01- TACAAGACGAAGATCTCTCAACT-CCATGGGCAGATGACATTGAACAGAAAGTTCTTAGC
rJMSF012E01+ C
rJMSF052M18+ TACAAGACGAAGATCTCTCAACTNCCATGGGCAGATGACATTGAACAGAAAGTTCTTAGC
                      ____________________________________________________________
consensus TACAAGACGAAGATCTCTCAACTNCCATGGGCAGATGACATTGAACAGAAAGTTCTTAGC
 
. : . : . : . : . : . :
JMSF012E01- TCTCCAGAAGTTGGTATTGGACCGTATGTGGAGGTGGCGTTTTATCATAAGCGTTCGCAG
rJMSF051L19+ AAGTTGGTATTGGACCGTATGTGGAGGTGGCGTTTTATCATAAGCGTTCGCAG
rJMSF012E01+ TCTCCAGAAGTTGGTATTGGACCGTATGTGGAGGTGGCGTTTTATCATAAGCGTTCGCAG
rJMSF052M18+ TCTCCAGAAGTTGGTATTGGACCGTATGTGGAGGTGGCGTTTTATCATAAGCGTTCGCAG
                      ____________________________________________________________
consensus TCTCCAGAAGTTGGTATTGGACCGTATGTGGAGGTGGCGTTTTATCATAAGCGTTCGCAG
 
. : . : . : . : . : . :
JMSF012E01- ACCTTATTAGTGACTGATGCGGTGATATTTGTCCCTAGGAGTCCACCCGAGTGTATAAGC
rJMSF051L19+ ACNTTATTAGTGACTGATGCGGTGATATTTGTCCCTAGGAGTCCACCCGAGTGTATAAGC
rJMSF012E01+ ACCTTATTAGTGACTGATGCGGTGATATTTGTCCCTAGGAGTCCACCCGAGTGTATAAGC
rJMSF052M18+ ACCTTATTAGTGACTGATGCGGTGATATTTGTCCCTAGGAGTCCACCCGAGTGTATAAGC
                      ____________________________________________________________
consensus ACCTTATTAGTGACTGATGCGGTGATATTTGTCCCTAGGAGTCCACCCGAGTGTATAAGC
 
. : . : . : . : . : . :
JMSF012E01- AAGGAGTCTCTGCTTGCGTCTGCAAAGAACGGTTTGGCTGTCAAACT
rJMSF051L19+ AAGGAGTCTCTGCTTGCGTCTGCAAAGAACGGTTTGGCTGTCAAACTCCTTAGTAAAGGG
rJMSF012E01+ AAGGAGTCTCTGCTTGCGTCTGCAAAGAACGGTTTGGCTGTCAAACTCCTTAGTAAAGGG
rJMSF052M18+ AAGGAGTCTCTGCTTGCGTCTGCAAAGAACGGTTTGGCTGTCAAACTCCTTAGTAAAGGG
                      ____________________________________________________________
consensus AAGGAGTCTCTGCTTGCGTCTGCAAAGAACGGTTTGGCTGTCAAACTCCTTAGTAAAGGG
 
. : . : . : . : . : . :
rJMSF051L19+ AAAGAAGTCCCCGAAGAGCCAGTTGTTGACAACGAGATGAACCGACAGAAAGGATGGGAG
rJMSF012E01+ AAAGAAGTCCCCGAAGAGCCAGTTGTTGACAACGAGATGAACCGACAGAAAGGATGGGAG
rJMSF052M18+ AAAGAAGTCCCCGAAGAGCCAGTTGTTGACAACGAGATGAACCGACAGAAAGGATGGGAG
                      ____________________________________________________________
consensus AAAGAAGTCCCCGAAGAGCCAGTTGTTGACAACGAGATGAACCGACAGAAAGGATGGGAG
 
. : . : . : . : . : . :
rJMSF051L19+ AGGATGGTTCTCCAGATTCTTTTTCTAGGCCCGTCAAATCTACTGGAGCCTAACGCTAGC
rJMSF012E01+ AGGATGGTTCTCCAGATTCTTTTTCTAGGCCCGTCAAATCTACTGGAGCCTAACGCTAGC
rJMSF052M18+ AGGATGGTTCTCCAGATTCTTTTTCTAGGCCCGTCAAATCTACTGGAGCCTAACGCTAGC
                      ____________________________________________________________
consensus AGGATGGTTCTCCAGATTCTTTTTCTAGGCCCGTCAAATCTACTGGAGCCTAACGCTAGC
 
. : . : . : . : . : . :
rJMSF051L19+ TTTGCTCAAATGTCACAGAAACTTATCGTTTCGCCCATCGTGAAGACACTGGTATTCAGC
rJMSF012E01+ TTTGCTCAAATGTCACAGAAACTTATCGTTTCGCCCATCGTGAAGACACTGGTATTCAGC
rJMSF052M18+ TTTGCTCAAATGTCACAGAAACTTATCGTTTCGCCCATCGTGAAGACACTGGTATTCAGC
                      ____________________________________________________________
consensus TTTGCTCAAATGTCACAGAAACTTATCGTTTCGCCCATCGTGAAGACACTGGTATTCAGC
 
. : . : . : . : . : . :
rJMSF051L19+ AAAGTTCCGGAAAAGGTTAGAGATNGGATTGATGGCATTGTGAGGGACTGGAAGTTCAAG
rJMSF012E01+ AAAGTTCCGGAAAAGGTTAGAGATTGGATTGATGGCATTGTGAGGGACTGGAAGTTCAAG
rJMSF052M18+ AAAGTTCCGGAAAAGGTTAGAGATTGGATTGATGGCATTGTGAGGGACTGGAAGTTCAAG
                      ____________________________________________________________
consensus AAAGTTCCGGAAAAGGTTAGAGATTGGATTGATGGCATTGTGAGGGACTGGAAGTTCAAG
 
. : . : . : . : . : . :
rJMSF051L19+ AGGATAATCCCGGCTCATTTCGCTGCCCCGATAAATGCAAATAGGTCTGATTTGTTAGCG
rJMSF012E01+ AGGATAATCCCGGCTCATTTCGCTGCCCCGATAAATGCAAATAGGTCTGATTTGTTAGCG
rJMSF052M18+ AGGATAATCCCGGCTCATTTCGCTGCCCCGATAAATGCAAATAGGTCTGATTTGTTAGCG
                      ____________________________________________________________
consensus AGGATAATCCCGGCTCATTTCGCTGCCCCGATAAATGCAAATAGGTCTGATTTGTTAGCG
 
. : . : . : . : . : . :
rJMSF051L19+ GCGTTTGCATTTCTAGACGATCTCCTGGGAGAGCGCTATGTGACCAGGCCGTCCCTCTCC
rJMSF012E01+ GCGTTTGCATTTCTAGACGATCTCCTGGGAGAGCGCTATGTGACCAGGCCGTCCCTCTCC
rJMSF052M18+ GCGTTTGCATTTCTAGACGATCTCCTGGGAGAGCGCTATGTGACCAGGCCGTCCCTCTCC
                      ____________________________________________________________
consensus GCGTTTGCATTTCTAGACGATCTCCTGGGAGAGCGCTATGTGACCAGGCCGTCCCTCTCC
 
. : . : . : . : . : . :
rJMSF051L19+ CTCGTCTTCACATCACTCTTGGGAAAAGTCGCGAGCTATTTTCCTCCAGATGATATGAGG
rJMSF012E01+ CTCGTCTTCACATCACTCTTGGGAAAAGCCGCGAGCTATTTTCCTCCAGATGATATGAGG
rJMSF052M18+ CTCGTCTTCACATCACTCTTGGGAAAAGCCGCGAGCTATTTTCCTCCAGATGATATGAGG
                      ____________________________________________________________
consensus CTCGTCTTCACATCACTCTTGGGAAAAGCCGCGAGCTATTTTCCTCCAGATGATATGAGG
 
. : . : . : . : . : . :
rJMSF051L19+ ACCTTATCATCCCTGGATGACTTCTTGGTCTCAGTNGGAGCAGTGAAGAAAACTGTCTCA
rJMSF012E01+ ACCTTATCATCCCTGGATGACTTCTTGGTCTCAGTTGGAGCAGTGAAGAAAACTGTCTCA
rJMSF052M18+ ACCTTATCATCCCTGGATGACTTCTTGGTCTCAGTTGGAGCAGTGAAGAAAACTGTCTCA
                      ____________________________________________________________
consensus ACCTTATCATCCCTGGATGACTTCTTGGTCTCAGTTGGAGCAGTGAAGAAAACTGTCTCA
 
. : . : . : . : . : . :
rJMSF051L19+ GGCCGGAAAAAATGACAACAAACCAAACAACACACAGATATGTAGATATAGCGTAGTGAA
rJMSF012E01+ GGCCGGAAAAAATGACAACAAACCAAACAACACACAGATATGTAGATATAGCGTAGTGAA
rJMSF052M18+ GGCCGGAAAAAATGACAACAAACCAAACAACACACAGATATGTAGATATAGCGTAGTGAA
                      ____________________________________________________________
consensus GGCCGGAAAAAATGACAACAAACCAAACAACACACAGATATGTAGATATAGCGTAGTGAA
 
. : . : . : . : . : . :
rJMSF051L19+ TGAAATATACATAC
rJMSF012E01+ TGAAATATACATACCTTGTGTTGGCTAGTGTAAAC
rJMSF052M18+ TGAAATATACATA-CTTGTGTTGGCTAGTGTAAACTTGTTTACTCTTTCAGCCACGGCAA
                      ____________________________________________________________
consensus TGAAATATACATACCTTGTGTTGGCTAGTGTAAACTTGTTTACTCTTTCAGCCACGGCAA