Contig 011439:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF051M04+                         ATCCCCGTCCATGTTGGGAAGTTCTACTGCCACCTTTGATGCTGC
                      ____________________________________________________________
consensus                            ATCCCCGTCCATGTTGGGAAGTTCTACTGCCACCTTTGATGCTGC
 
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rJMSF051M04+          CCCAGGAAACGATGAGCAGATGAATATGGAGGACAGCAGCATGGCTGAGGATCCCGTACA
rJMSF051M15+                   CGATGAGCAGATGAATATGGAGGACAGCAGCATGGCTGAGGATCCCGTACA
                      ____________________________________________________________
consensus             CCCAGGAAACGATGAGCAGATGAATATGGAGGACAGCAGCATGGCTGAGGATCCCGTACA
 
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rJMSF051M04+          GTCATCTGCACCCACAGTTTCTGTATTTGGCCAAGCCGCCTCTTCTTCTCCTCCCTCTTC
rJMSF051M15+          GTCATCTGCACCCACAGTTTCTGTATTTGGCCAAGCCGCCTCTTCTTCTCCTCCCTCTTC
                      ____________________________________________________________
consensus             GTCATCTGCACCCACAGTTTCTGTATTTGGCCAAGCCGCCTCTTCTTCTCCTCCCTCTTC
 
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rJMSF051M04+          TGTTACATTTGGCTCAATGGTTCCGCTGTCTAATACTTTCCAATTTGGCGGGCAACAGAA
rJMSF051M15+          TGTTACATTTGGCTCAATGGTTCCGCTGTCTAATACTTTCCAATTTGGCGGGCAACAGAA
                      ____________________________________________________________
consensus             TGTTACATTTGGCTCAATGGTTCCGCTGTCTAATACTTTCCAATTTGGCGGGCAACAGAA
 
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rJMSF051M04+          TCCAGCTACTCCTCAAAACTCATCTCTATTTCAGGCGACTGTTCCAACGCCTAATCCATT
rJMSF051M15+          TCCAGCTACTCCTCAAAACTCATCTCTATTTCAGGCGACTGTTCCAACGCCTAATCCATT
                      ____________________________________________________________
consensus             TCCAGCTACTCCTCAAAACTCATCTCTATTTCAGGCGACTGTTCCAACGCCTAATCCATT
 
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rJMSF051M04+          CCAATTTAGCGGGCAACAGAATCCAGCTGCTCCCCCCAGTCCATCTCCATCCCCGTTTCA
rJMSF051M15+          CCAATTTAGCGGGCAACAGAATCCAGCTGCTCCCCCCAGTCCATCTCCATCCCCGTTTCA
                      ____________________________________________________________
consensus             CCAATTTAGCGGGCAACAGAATCCAGCTGCTCCCCCCAGTCCATCTCCATCCCCGTTTCA
 
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rJMSF051M04+          ACCACCAGGCAGTCTGGGCTTCAGCACAGGAGGGAGCTTCTCATTGGGCAGCTCCGGTAA
rJMSF051M15+          ACCACCAGGCAGTCTGGGCTTCAGCACAGGAGGGAGCTTCTCATTGGGCAGCTCCGGTAA
                      ____________________________________________________________
consensus             ACCACCAGGCAGTCTGGGCTTCAGCACAGGAGGGAGCTTCTCATTGGGCAGCTCCGGTAA
 
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rJMSF051M04+          TGACAAATCTGGTAGAAGGATCGTGAAAATTAATAGAAACAAGAACCGAAGGAAGTGAGA
rJMSF051M15+          TGACAAATCTGGTAGAAGGATCGTGAAAATTAATAGAAACAAGAACCGAAGGAAGTGAGA
                      ____________________________________________________________
consensus             TGACAAATCTGGTAGAAGGATCGTGAAAATTAATAGAAACAAGAACCGAAGGAAGTGAGA
 
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rJMSF051M04+          GCTTCAAGGAAAGACGTCTCTCTGGCGAGGTGGTCATATCATTTGCAGGATCCGGTGAGT
rJMSF051M15+          GCTTCAAGGAAAGACGTCTCTCTGGCGAGGTGGTCATATCATTTGCAGGATCCGGTGAGT
                      ____________________________________________________________
consensus             GCTTCAAGGAAAGACGTCTCTCTGGCGAGGTGGTCATATCATTTGCAGGATCCGGTGAGT
 
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rJMSF051M04+          CATTGTCTTTTTGGCTTGTGGGCTATAGTATCTCCATGCAGTAGACTTTGGGGCACATCA
rJMSF051M15+          CATTGTCTTTTTGGCTTGTGGGCTATAGTATCTCCATGCAGTAGACTTTGGGGCACATCA
                      ____________________________________________________________
consensus             CATTGTCTTTTTGGCTTGTGGGCTATAGTATCTCCATGCAGTAGACTTTGGGGCACATCA
 
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rJMSF051M04+          ATTTGGTGTGCAATTTTGTCACCACAATACAATATTTCTGAAATGGCATTATTGTCACAA
rJMSF051M15+          ATTTGGTGTGCAATTTTGTCACCACAATACAATATTTCTGAAATGGCATTATTGTCACAA
                      ____________________________________________________________
consensus             ATTTGGTGTGCAATTTTGTCACCACAATACAATATTTCTGAAATGGCATTATTGTCACAA
 
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rJMSF051M04+          TTTTGTATATGTGCCTCTAGTGAATAC                                 
rJMSF051M15+          TTTTGTATATGTGCCTCTAGTGAATACAAGAATATGATAGTGTTATAGAGTCGAAGTAAT
                      ____________________________________________________________
consensus             TTTTGTATATGTGCCTCTAGTGAATACAAGAATATGATAGTGTTATAGAGTCGAAGTAAT
 
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rJMSF051M15+          ACATGATACTATGATAGTGTGTATTTTACCTCGTCCAAATGTCTTATCAAACTTCTTTTT
                      ____________________________________________________________
consensus             ACATGATACTATGATAGTGTGTATTTTACCTCGTCCAAATGTCTTATCAAACTTCTTTTT
 
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rJMSF051M15+          GTATCTTTACGTGTAACATCAAAAGGAAATCTTTATGTAGTTGGGAACATTGATTTACTA
                      ____________________________________________________________
consensus             GTATCTTTACGTGTAACATCAAAAGGAAATCTTTATGTAGTTGGGAACATTGATTTACTA