Contig 011436:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF049E13+                                            GGTCAAACTCGAGATGGAACAAGTTG
rJMSF051C04+                                       TTAAAGGTCAAACTCGAGATGGAACAAGTTG
                      ____________________________________________________________
consensus                                          TTAAAGGTCAAACTCGAGATGGAACAAGTTG
 
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rJMSF049E13+          TTAGGTTTGTGTCTGGACCAGATTGAAAAGCAAGCCAGTGGGGTCGAAGGTGGAATGTAA
rJMSF051C04+          TTAGGTTTGTGTCTGGACCAGATTGAAAAGCAAGCCAGTGGGGTCGAAGGTGGAATGTAA
                      ____________________________________________________________
consensus             TTAGGTTTGTGTCTGGACCAGATTGAAAAGCAAGCCAGTGGGGTCGAAGGTGGAATGTAA
 
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rJMSF049E13+          GATAAAACTTTCTTTCACCAAATAATTCCTTCCTTTTGGTGCTTTCATCTTCATGTGGTG
rJMSF051C04+          GATAAAACTTTCTTTCACCAAATAATTCCTTCCTTTTGGTGCTTTCATCTTCATGTGGTG
                      ____________________________________________________________
consensus             GATAAAACTTTCTTTCACCAAATAATTCCTTCCTTTTGGTGCTTTCATCTTCATGTGGTG
 
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rJMSF049E13+          ACTGCAGATGACTTGAAAGCAAAATAGAATATTAGCTCCTATAGTCTGTAATGAAGGTCA
rJMSF051C04+          ACTGCAGATGACTTGAAAGCAAAATAGAATATTAGCTCCTATAGTCTGTAATGAAGGTCA
                      ____________________________________________________________
consensus             ACTGCAGATGACTTGAAAGCAAAATAGAATATTAGCTCCTATAGTCTGTAATGAAGGTCA
 
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rJMSF049E13+          TTGTCTCTGAGCTACAGACTATCGTCATAAAGGTTTTAAACATGAGAATCGAGAAGTAGC
rJMSF051C04+          TTGTCTCTGAGCTACAGACTATCGTCATAAAGGTTTTAAACATGAGAATCGAGAAGTAGC
                      ____________________________________________________________
consensus             TTGTCTCTGAGCTACAGACTATCGTCATAAAGGTTTTAAACATGAGAATCGAGAAGTAGC
 
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rJMSF049E13+          AGTCATTCTCCATTAACCTTTGGTTCTCGTTCACATAGTCTCGGGTCCATTATGGTTCAT
rJMSF051C04+          AGTCATTCTCCATTAACCTTTGGTTCTCGTTCACATAGTCTCGGGTCCATTATGGTTCAT
                      ____________________________________________________________
consensus             AGTCATTCTCCATTAACCTTTGGTTCTCGTTCACATAGTCTCGGGTCCATTATGGTTCAT
 
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rJMSF049E13+          TTGTTAGGTTCTATTTTTAGGTAATTGTTGGTGGGTGGGTCATATGTTGCCTACCCGATT
rJMSF051C04+          TTGTTAGGTTCTATTTTTAGGTAATTGTTGGTGGGTGGGTCATATGTTGCCTACCCGATT
                      ____________________________________________________________
consensus             TTGTTAGGTTCTATTTTTAGGTAATTGTTGGTGGGTGGGTCATATGTTGCCTACCCGATT
 
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rJMSF049E13+          CATGTTTGAAGACGTGCTATGGTGCATTAGTTTTTGTTTTTTTGGTCAGACCACGAGGTG
rJMSF051C04+          CATGTTTGAAGACGTGCTATGGTGCATTAGTTTTTGTTTTTTTGGTCAGACCACGAGGTG
                      ____________________________________________________________
consensus             CATGTTTGAAGACGTGCTATGGTGCATTAGTTTTTGTTTTTTTGGTCAGACCACGAGGTG
 
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rJMSF049E13+          TCCTGAGCAGACCCTAACTGTAGGAGGCCCGTGAATCCTGTGACCGGTGTGGCCTTCAGA
rJMSF051C04+          TCCTGAGCAGACCCTAACTGTAGGAGGCCCGTGAATCCTGTGACCGGTGTGGCCTTCAGA
                      ____________________________________________________________
consensus             TCCTGAGCAGACCCTAACTGTAGGAGGCCCGTGAATCCTGTGACCGGTGTGGCCTTCAGA
 
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rJMSF049E13+          AAAACGAGAATACACATCCGCTGACCCTTCCGAATATAGAAGGACCAATATTTGGCGACA
rJMSF051C04+          AAAACGAGAATACACATCCGCTGACCCTTCCGAATATAGAAGGACCAATATTTGGCGACA
                      ____________________________________________________________
consensus             AAAACGAGAATACACATCCGCTGACCCTTCCGAATATAGAAGGACCAATATTTGGCGACA
 
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rJMSF049E13+          CGAATGTGAGTGAAGTGGGTAAGACTGTTGAGCAGGTGAAACTTCCTTGCCTCTCTCTCC
rJMSF051C04+          CGAATGTGAGTGAAGTGGGTAAGACTGTTGAGCAGGTGAAACTTCCTTGCCTCTCTCTCC
                      ____________________________________________________________
consensus             CGAATGTGAGTGAAGTGGGTAAGACTGTTGAGCAGGTGAAACTTCCTTGCCTCTCTCTCC
 
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rJMSF049E13+          ATCTTTTTCTTGCTTTATTCAACCAGTTCATGTGTGAATCCTGCAGATCCACTCAGCAAC
rJMSF051C04+          ATCTTTTTCTTGCTTTATTCAACCAGTTCATGTGTGAATCCTGCAGATCCACTCAGCAAC
                      ____________________________________________________________
consensus             ATCTTTTTCTTGCTTTATTCAACCAGTTCATGTGTGAATCCTGCAGATCCACTCAGCAAC
 
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rJMSF049E13+          TTGTGTAGAATATGTGAATAGAATTGAAAGGCCTTT                        
rJMSF051C04+          TTGTGTAGAATCTGTGAATAGAATTGAAAGGCCTTTTGTTGGATACAATGAACCATTCCC
                      ____________________________________________________________
consensus             TTGTGTAGAATCTGTGAATAGAATTGAAAGGCCTTTTGTTGGATACAATGAACCATTCCC