Contig 011434:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN038N14Sequence626011434 (2)ref|XP_011093461.1|2e-132PREDICTED: probable serine/threonine-protein kinase At4g35230 [Sesamum indicum]
JMSF050E02Sequence632017960ref|XP_011085053.1|1e-04PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform X1 [Sesam756011434 (2)ref|XP_009629803.1|5e-116PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment

Alignment

This contig is upended


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JMFN038N14-                           CGCACAGGCAGGGTCATTCCAGAAAGTGTGATCTATAGCTATGG
                      ____________________________________________________________
consensus                             CGCACAGGCAGGGTCATTCCAGAAAGTGTGATCTATAGCTATGG
 
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JMFN038N14-           AACTGTTCTGCTGGACCTTCTGAGTGGAAAGCATATACCCCCGAGCCGTGCTTTAGATTT
                      ____________________________________________________________
consensus             AACTGTTCTGCTGGACCTTCTGAGTGGAAAGCATATACCCCCGAGCCGTGCTTTAGATTT
 
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JMFN038N14-           GATAAGGGGAAAAAACATATTGTTGCTTATGGATTCGTCCTTGGAAGGACAATACGCCAA
                      ____________________________________________________________
consensus             GATAAGGGGAAAAAACATATTGTTGCTTATGGATTCGTCCTTGGAAGGACAATACGCCAA
 
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JMFN038N14-           TGAAGATGCTGCTGCATTGGTGGAACTTGCTTCCAAGTGCCTTCAGTATGAAGCTCGGGA
                      ____________________________________________________________
consensus             TGAAGATGCTGCTGCATTGGTGGAACTTGCTTCCAAGTGCCTTCAGTATGAAGCTCGGGA
 
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JMFN038N14-           CCGCCCGAATATCAAGTTCATTCTTACCGCTGTGGAACCCCTTGAAAAGCAGAAAGAGGT
rJMSF050E02+                                                    TGAAAAGCAGAAAGAGGT
                      ____________________________________________________________
consensus             CCGCCCGAATATCAAGTTCATTCTTACCGCTGTGGAACCCCTTGAAAAGCAGAAAGAGGT
 
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JMFN038N14-           TGCATCACATGTTTTAATGGGTCTGACGAAAACCGCCCCTGCTGTGGTCCCCACCATGCT
rJMSF050E02+          TGCATCACATGTTTTAATGGGTCTGACGAAAACCGCCCCTGCTGTGGTCCCCACCATGCT
                      ____________________________________________________________
consensus             TGCATCACATGTTTTAATGGGTCTGACGAAAACCGCCCCTGCTGTGGTCCCCACCATGCT
 
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JMFN038N14-           TTCTCCTCTCGGGAAGGCATGTGTGAGGATGGACCTCACGGCTGTGCACGATATCTTGCT
rJMSF050E02+          TTCTCCTCTCGGGAAGGCATGTGTGAGGATGGACCTCACGGCTGTGCACGATATCTTGCT
                      ____________________________________________________________
consensus             TTCTCCTCTCGGGAAGGCATGTGTGAGGATGGACCTCACGGCTGTGCACGATATCTTGCT
 
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JMFN038N14-           TAAAACGGGTTATAAAGACGAGGAAGGTGCAGAAAATGAGCTTTCGTTCCAAGAATGGAC
rJMSF050E02+          TAAAACGGGTTATAAAGACGAGGAAGGTGCAGAAAATGAGCTTTCGTTCCAAGAATGGAC
                      ____________________________________________________________
consensus             TAAAACGGGTTATAAAGACGAGGAAGGTGCAGAAAATGAGCTTTCGTTCCAAGAATGGAC
 
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JMFN038N14-           ACAACAAGTGCAAGATATGCTGAACACGAAGAAATTTGGGGATATCGCTTTTAGGGACAA
rJMSF050E02+          ACAACAAGTGCAAGATATGCTGAACACGAAGAAATTTGGGGATATCGCTTTTAGGGACAA
                      ____________________________________________________________
consensus             ACAACAAGTGCAAGATATGCTGAACACGAAGAAATTTGGGGATATCGCTTTTAGGGACAA
 
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JMFN038N14-           GGACTTCAAGAGCGCAATTGAGTACTATTCAAAGTTGGTATCAATGATGCCCATCGCTTC
rJMSF050E02+          GGACTTCAAGAGCGCAATTGAGTACTATTCAAAGTTGGTATCAATGATGCCCATCGCTTC
                      ____________________________________________________________
consensus             GGACTTCAAGAGCGCAATTGAGTACTATTCAAAGTTGGTATCAATGATGCCCATCGCTTC
 
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JMFN038N14-           GGGTACTGTTTTTGTGAGGCGGGCGCTCTCTTACTTGATGAT                  
rJMSF050E02+          GGGTACTGTTTTTGTGAGGCGGGCGCTCTCTTACTTGATGATAGGGCAGCCAGAGCTCGC
                      ____________________________________________________________
consensus             GGGTACTGTTTTTGTGAGGCGGGCGCTCTCTTACTTGATGATAGGGCAGCCAGAGCTCGC
 
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rJMSF050E02+          CCTCCGGGATGCAATGCAGGCGCAGGTCTGCTTGCCCGAGTGGCCAACCGCATTCTACAT
                      ____________________________________________________________
consensus             CCTCCGGGATGCAATGCAGGCGCAGGTCTGCTTGCCCGAGTGGCCAACCGCATTCTACAT
 
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rJMSF050E02+          GCAGGCCCTCGCCCTCTCGAAGCTAGGAATGGAGACCGACGCCCAGGACATGCTCAACGA
                      ____________________________________________________________
consensus             GCAGGCCCTCGCCCTCTCGAAGCTAGGAATGGAGACCGACGCCCAGGACATGCTCAACGA
 
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rJMSF050E02+          TGGAGCCTCCTTCGAAGCAAAGAAGCTAAACAGTTGGCGTAACTAAGTAATCCCGATTAT
                      ____________________________________________________________
consensus             TGGAGCCTCCTTCGAAGCAAAGAAGCTAAACAGTTGGCGTAACTAAGTAATCCCGATTAT
 
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rJMSF050E02+          CCAATCCGTTTGTCTCTGTTAGATACATATATATATATACATTGTTAGCTGTTGATGAGG
                      ____________________________________________________________
consensus             CCAATCCGTTTGTCTCTGTTAGATACATATATATATATACATTGTTAGCTGTTGATGAGG
 
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rJMSF050E02+          AAATCTGTAAGATGAGGGTTTGCATTTACAAAAAGTTGCCCTCTATTGTAGCCATGAGTA
                      ____________________________________________________________
consensus             AAATCTGTAAGATGAGGGTTTGCATTTACAAAAAGTTGCCCTCTATTGTAGCCATGAGTA
 
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rJMSF050E02+          TAGTTCCATATAGTGTATACAGCATTGTTGTGGCGTTTGGCTAGGCTCTTTCGAAGCAAA
                      ____________________________________________________________
consensus             TAGTTCCATATAGTGTATACAGCATTGTTGTGGCGTTTGGCTAGGCTCTTTCGAAGCAAA