Contig 011433:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018N12Sequence558002461 (5)ref|XP_009610231.1|2e-36PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform793011433 (4)ref|XP_009610231.1|1e-106PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform
JMFF027M11Sequence567002461 (5)ref|XP_009610231.1|5e-38PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform696011433 (4)ref|XP_009610231.1|5e-81PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform
JMFF046B14Sequence463002461 (5)ref|XP_009610231.1|7e-29PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform331011433 (4)emb|CBI24594.3|8e-13unnamed protein product [Vitis vinifera]
JMSF049I19Sequence699002461 (5)ref|XP_009610231.1|2e-67PREDICTED: putative glycerol-3-phosphate transporter 1 [Nicotiana tomentosiform732011433 (4)emb|CBI24594.3|6e-28unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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rJMFF018N12+                                                                  ATTG
                      ____________________________________________________________
consensus                                                                     ATTG
 
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rJMFF018N12+          GCTTCCTTTCTACATTAGCCACACAGCTATAAATGGAAGGTACTTATCGAACGAGGAATC
                      ____________________________________________________________
consensus             GCTTCCTTTCTACATTAGCCACACAGCTATAAATGGAAGGTACTTATCGAACGAGGAATC
 
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rJMFF027M11+                       ACGATGTTTGATGTTGGCGGGGTGGTTGGGGGAATCNTAGCCGGCTA
rJMFF018N12+          AGGGAACTTATCTACGATGTTTGATGTTGGCGGGGTGGTTGGGGGAATCCTAGCCGGCTA
                      ____________________________________________________________
consensus             AGGGAACTTATCTACGATGTTTGATGTTGGCGGGGTGGTTGGGGGAATCCTAGCCGGCTA
 
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rJMFF027M11+          CATTTCCGATCGCTTGGATGCCAGAGCCATGACGGCTGCCAGCTTCATGTACTGCGCGAT
rJMFF018N12+          CATTTCCGATCGCTTGGATGCCAGAGCCATGACGGCTGCCAGCTTCATGTACTGCGCGAT
                      ____________________________________________________________
consensus             CATTTCCGATCGCTTGGATGCCAGAGCCATGACGGCTGCCAGCTTCATGTACTGCGCGAT
 
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rJMFF027M11+          TCCAGCCCTCTTCTTCTACAGAAACTATGGCCATGTCTCCATGCCCATCAACATCATCCT
rJMFF018N12+          TCCAGCCCTCTTCTTCTACAGAAACTATGGCCATGTCTCCATGCCCATCAACATCATCCT
                      ____________________________________________________________
consensus             TCCAGCCCTCTTCTTCTACAGAAACTATGGCCATGTCTCCATGCCCATCAACATCATCCT
 
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rJMFF027M11+          CATGTTGATCACGGGAGCGTTTGTGAATGGACCTTACGCGCTGATAACAACCGCGGTTTC
rJMFF018N12+          CATGTTGATCACGGGAGCGTTTGTGAATGGACCTTACGCGCTGATAACAACCGCGGTTTC
rJMSF049I19+                                                          AACCGCGGTTTC
                      ____________________________________________________________
consensus             CATGTTGATCACGGGAGCGTTTGTGAATGGACCTTACGCGCTGATAACAACCGCGGTTTC
 
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rJMFF027M11+          AGCAGACCTGGGAACACACAGCTCGTTGAAAGGCAACTCGAGAGCACTGGCAACAGTCAC
rJMFF018N12+          AGCAGACCTGGGAACACACAGCTCGTTGAAAGGCAACTCGAGAGCACTGGCAACAGTCAC
rJMSF049I19+          AGCAGACCTGGGAACACACAGCTCGTTGAAAGGCAACTCGAGAGCACTGGCAACAGTCAC
                      ____________________________________________________________
consensus             AGCAGACCTGGGAACACACAGCTCGTTGAAAGGCAACTCGAGAGCACTGGCAACAGTCAC
 
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rJMFF027M11+          TGCAATTATCGATGGAACTGGCTCCATTGGGGCTGCCATTGGCCCTCTGCTAACCGGCTA
rJMFF018N12+          TGCAATTATCGATGGAACTGGCTCCATTGGGGCTGCCATTGGCCCTCTGCTAACCGGCTA
rJMFF046B14+                  TCGATGGAACTGGCTCCATTGGGGCTGCCATTGGCCCTCTGCTAACCGGCTA
rJMSF049I19+          TGCAATTATCGATGGAACTGGCTCCATTGGGGCTGCCATTGGCCCTCTGCTAACCGGCTA
                      ____________________________________________________________
consensus             TGCAATTATCGATGGAACTGGCTCCATTGGGGCTGCCATTGGCCCTCTGCTAACCGGCTA
 
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rJMFF027M11+          CATTTCTGCTAAGAGCTGGGGTGCGGTTTTCACAATGTTTATGGGAGCAGCCCTGGTTGC
rJMFF018N12+          CATTTCTGCTAAGAGCTGGGGTGCGGTTTTCACAATGTTTATGGGAGCAGCCCTGGTTGC
rJMFF046B14+          CATTTCTGCTAAGAGCTGGGGTGCGGTTTTCACAATGTTAATGGGAGCAGCCCTGGTTGC
rJMSF049I19+          CATTTCTGCTAAGAGCTGGGGTGCGGTTTTCACAATGTTAATGGGAGCAGCCCTGGTTGC
                      ____________________________________________________________
consensus             CATTTCTGCTAAGAGCTGGGGTGCGGTTTTCACAATGTTTATGGGAGCAGCCCTGGTTGC
 
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rJMFF027M11+          CGGCTTGCTTCTAACTAGGTTAGTCATCTCCGAGGTTGCCACCAAGATCCAAAACTCCAG
rJMFF018N12+          CGGCTTGCTTCTAACTAGGTTAGTCATCTCCGAGGTTGCCACCAAGATCCAAAACTCCAG
rJMFF046B14+          CGGCTTGCTTCTAACTAGGTTAGTCATCTCCGAGGTTGCCACCAAGATCCAAAACTCCAG
rJMSF049I19+          CGGCTTGCTTCTAACTAGGTTAGTCATCTCCGAGGTTGCCACCAAGATCCAAAACTCCAG
                      ____________________________________________________________
consensus             CGGCTTGCTTCTAACTAGGTTAGTCATCTCCGAGGTTGCCACCAAGATCCAAAACTCCAG
 
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rJMFF027M11+          GAGCCAAGGGGAGCCAAGGTCACAGCAGTCTCCCGTCAATTTAGTGTAAACAGTGAAAGT
rJMFF018N12+          GAGCCAAGGGGAGCCAAGGTCACAGCAGTCTCCCGTCAATTTAGTGTAAACAGTGAAAGT
rJMFF046B14+          GAGCCAAGGGGAGCCAAGGTCACAGCAGTCTCCCGTCAATTTAGTGTAAACAGTGAAAGT
rJMSF049I19+          GAGCCAAGGGGAGCCAAGGTCACAGCAGTCTCCCGTCAATTTAGTGTAAACAGTGAAAGT
                      ____________________________________________________________
consensus             GAGCCAAGGGGAGCCAAGGTCACAGCAGTCTCCCGTCAATTTAGTGTAAACAGTGAAAGT
 
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rJMFF027M11+          AGTCGCTTATATAATGTGTATATATTATCTATATTCGAGCCCGATGCTTTGGTTTTCAGC
rJMFF018N12+          AGTCGCTTATATAATGTGTATATATTATCTATATTCGAGCCCGATGCTTTGGTTTTCAGC
rJMFF046B14+          AGTCGCTTATATAATGTGTATATATTATCTATATTCGAGCCCGATGCTTTGGTTTTCAGC
rJMSF049I19+          AGTCGCTTATATAATGTGTATATATTATCTATATTCGAGCCCGATGCTTTGGTTTTCAGC
                      ____________________________________________________________
consensus             AGTCGCTTATATAATGTGTATATATTATCTATATTCGAGCCCGATGCTTTGGTTTTCAGC
 
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rJMFF027M11+          CTCGGATCACCCAGATGAAGGGAATGGAGGAAGATATTACAGGTTACTCCATTGTTGTTA
rJMFF018N12+          CTCGGATCACCCAGATGAAGGGAATGGAGGAAGATATTACAGGTTACTCCATTGTTGTTA
rJMFF046B14+          CTCGGATCACCCAGATGAAGGGAATGGAGGAAGATATT                      
rJMSF049I19+          CTCGGATCACCCAGATGAAGGGAATGGAGGAAGATATTACAGGTTACTCCATTGTTGTTA
                      ____________________________________________________________
consensus             CTCGGATCACCCAGATGAAGGGAATGGAGGAAGATATTACAGGTTACTCCATTGTTGTTA
 
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rJMFF027M11+          CTGTATACAAGTTTAGCTGCTGTGTTGTGTGCCAAAAAGCGATAGATCA           
rJMFF018N12+          CTGTATACAAGTTTAGCTGCTGTGTTGTGTGCCAAAAAGCGATAGATCATTGCGTTTGGA
rJMSF049I19+          CTGTATACAAGTTTAGCTGCTGTGTTGTGTGCCAAAAAGCGATAGATCATTGCGTTTGGA
                      ____________________________________________________________
consensus             CTGTATACAAGTTTAGCTGCTGTGTTGTGTGCCAAAAAGCGATAGATCATTGCGTTTGGA
 
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rJMFF018N12+          ACCAGAAGC                                                   
rJMSF049I19+          ACCAGAAGCCTAAATTCTGGGAATTGAAAAGTTTCTCATTCCTGAAAGATTTCAAAATAG
                      ____________________________________________________________
consensus             ACCAGAAGCCTAAATTCTGGGAATTGAAAAGTTTCTCATTCCTGAAAGATTTCAAAATAG
 
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rJMSF049I19+          ATTAGTATGTAGCTGTTTTGCCTTGATGAGCAATGGGATTAGGTGGGGCAAAAGATATGA
                      ____________________________________________________________
consensus             ATTAGTATGTAGCTGTTTTGCCTTGATGAGCAATGGGATTAGGTGGGGCAAAAGATATGA
 
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rJMSF049I19+          AATTTGCTTATCTTTTTGCCTTCCATGTCCATTTCTGATTGCATTTCTTGTCACTTTCAG
                      ____________________________________________________________
consensus             AATTTGCTTATCTTTTTGCCTTCCATGTCCATTTCTGATTGCATTTCTTGTCACTTTCAG
 
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rJMSF049I19+          AAGATGAACCTTTTTCTTCCATTCAAGGATGGGGAAACTATCTGGAAATTGTCCTCTTTC
                      ____________________________________________________________
consensus             AAGATGAACCTTTTTCTTCCATTCAAGGATGGGGAAACTATCTGGAAATTGTCCTCTTTC