Contig 011432:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS145F12Sequence624011432 (6)gb|KDO77329.1|8e-113hypothetical protein CISIN_1g003514mg [Citrus sinensis]
JMSF024N18Sequence655007956 (5)ref|XP_009588750.1|7e-115PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]225011432 (6)emb|CDP11269.1|3e-35unnamed protein product [Coffea canephora]
JMSF033K22Sequence656007956 (5)ref|XP_009588750.1|2e-93PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]649011432 (6)emb|CDP11269.1|1e-96unnamed protein product [Coffea canephora]
JMSF036M06Sequence666007956 (5)ref|XP_009588750.1|3e-111PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]692011432 (6)ref|XP_009603645.1|5e-106PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]
JMSF036P05Sequence654007956 (5)ref|XP_009588750.1|2e-96PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]703011432 (6)ref|XP_009603645.1|5e-113PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]
JMSF049F04Sequence667007956 (5)ref|XP_009588750.1|7e-117PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]725011432 (6)ref|XP_009603645.1|2e-108PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS145F12-                                                              GACGGCTGG
                      ____________________________________________________________
consensus                                                                GACGGCTGG
 
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JMFS145F12-           ATTCAGAAATCAGAGTCAAATTGGCAATGCTTACGGCACAGCGGTCGTGATAGTCATGCT
                      ____________________________________________________________
consensus             ATTCAGAAATCAGAGTCAAATTGGCAATGCTTACGGCACAGCGGTCGTGATAGTCATGCT
 
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JMFS145F12-           CGTCACCACGCTTCTCATGATCTTGATAATGTTGCTAGTCTGGCACTGTCACTGGATTAT
                      ____________________________________________________________
consensus             CGTCACCACGCTTCTCATGATCTTGATAATGTTGCTAGTCTGGCACTGTCACTGGATTAT
 
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JMFS145F12-           CGTCGTTATCTTCACGGGATTATCTCTCGTGGTGGAGTGCACTTACTTCTCGGCGGTTCT
                      ____________________________________________________________
consensus             CGTCGTTATCTTCACGGGATTATCTCTCGTGGTGGAGTGCACTTACTTCTCGGCGGTTCT
 
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JMFS145F12-           TTTCAAGGTCGATCAGGGCGGTTGGGTTCCGCTTGTGATTGCTGCAGCTTTTCTGATAAT
                      ____________________________________________________________
consensus             TTTCAAGGTCGATCAGGGCGGTTGGGTTCCGCTTGTGATTGCTGCAGCTTTTCTGATAAT
 
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JMFS145F12-           CATGTACGTTTGGCACTATGGCACGGTGAAGCGCTATGAATTCGAGATGCACAGCAAGGT
                      ____________________________________________________________
consensus             CATGTACGTTTGGCACTATGGCACGGTGAAGCGCTATGAATTCGAGATGCACAGCAAGGT
 
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JMFS145F12-           CTCGATGGCTTGGATTCTCGGGCTCGGCCCGAGCTTAGGCCTAGTTCGTGTTCCCGGGAT
                      ____________________________________________________________
consensus             CTCGATGGCTTGGATTCTCGGGCTCGGCCCGAGCTTAGGCCTAGTTCGTGTTCCCGGGAT
 
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JMFS145F12-           AGGGCTCGTTTACACCGAGCTAGCAAGTGGAGTGCCCCATATTTTTTCTCACTTCATCAC
rJMSF036P05+                   TTACACCGAGCTAGCAAGTGGAGTGCCCCATATTTTTTCTCACTTCATCAC
rJMSF036M06+                             CTAGCAAGTGGAGTGCCCCATATTTTTTCTCACTTCATCAC
rJMSF049F04+                   TTACACCGAGCTAGCAAGTGGAGTGCCCCATATTTTTTCTCACTTCATCAC
                      ____________________________________________________________
consensus             AGGGCTCGTTTACACCGAGCTAGCAAGTGGAGTGCCCCATATTTTTTCTCACTTCATCAC
 
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JMFS145F12-           GAATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
rJMSF036P05+          GAATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
rJMSF033K22+            ATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
rJMSF036M06+          GAATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
rJMSF049F04+          GAATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
                      ____________________________________________________________
consensus             GAATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
 
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JMFS145F12-           TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
rJMSF036P05+          TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
rJMSF033K22+          TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
rJMSF036M06+          TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
rJMSF049F04+          TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
                      ____________________________________________________________
consensus             TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
 
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JMFS145F12-           GTTCCGGTGTGTTGCAAGGTATGGTTACAAAGACCTTCACANAAAAGACGATGATTNTGA
rJMSF036P05+          GTTCCGGTGTGTTGCAAGGTATGGTTACAAAAACCTTCACAAAAAAGACGATGATTTTGA
rJMSF033K22+          GTTCCGGTGTGTTGCAAGGTATGGTTACAAAGACCTTCACAAAAAAGACGATGATTTTGA
rJMSF036M06+          GTTCCGGTGTGTTGCAAGGTATGGTTACAAAGACCTTCACAAAAAAGACGATGATTTTGA
rJMSF049F04+          GTTCCGGTGTGTTGCAAGGTATGGTTACAAAGACCTTCACAAAAAAGACGATGATTTTGA
                      ____________________________________________________________
consensus             GTTCCGGTGTGTTGCAAGGTATGGTTACAAAGACCTTCACAAAAAAGACGATGATTTTGA
 
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JMFS145F12-           GAAAGAACTGTTTGA                                             
rJMSF036P05+          GAAGAAACTGTTTGACAACCTCTTCACATTCGTTCGCCTCGAGTCCATGATGGAAGGCTG
rJMSF033K22+          GAAGAAACTGTTTGACAACCTCTTCACATTCGTTCGCCTCGAGTCCATGATGGAAGGCTG
rJMSF036M06+          GAAGAAACTGTTTGACAACCTCTTCACATTCGTTCGCCTCGAGTCCATGATGGAAGGCTG
rJMSF049F04+          GAAGAAACTGTTTGACAACCTCTTCACATTCGTTCGCCTCGAGTCCATGATGGAAGGCTG
                      ____________________________________________________________
consensus             GAAGAAACTGTTTGACAACCTCTTCACATTCGTTCGCCTCGAGTCCATGATGGAAGGCTG
 
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rJMSF036P05+          CTCGGATTCCGACGAGTACAGCGTGTACGGGCAGCAAACACAGCAATCGAGGGATTTCCT
rJMSF033K22+          CTCGGATTCCGACGAGTACAGCGTGTACGGGCAGCAAACACAGCAATCGAGGGATTTCCT
rJMSF036M06+          CTCGGATTCCGACGAGTACAGCGTGTACGGGCAGCAAACACAGCAATCGAGGGATTTCCT
rJMSF049F04+          CTCGGATTCCGACGAGTACAGCGTGTACGGGCAGCAAACACAGCAATCGAGGGATTTCCT
                      ____________________________________________________________
consensus             CTCGGATTCCGACGAGTACAGCGTGTACGGGCAGCAAACACAGCAATCGAGGGATTTCCT
 
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rJMSF036P05+          TCTGCCGAAGAACAATGGCAACACATGCACGAGCACAGACCTCACGGTGTCCTCGGTGGA
rJMSF033K22+          TCTGCCGAAGAACAATGGCAACACATGCACGAGCACAGACCTCACGGTGTCCTCGGTGGA
rJMSF036M06+          TCTGCCGAAGAACAATGGCAACACATGCACGAGCACAGACCTCACGGTGTCCTCGGTGGA
rJMSF049F04+          TCTGCCGAAGAACAATGGCAACACATGCACGAGCACAGACCTCACGGTGTCCTCGGTGGA
                      ____________________________________________________________
consensus             TCTGCCGAAGAACAATGGCAACACATGCACGAGCACAGACCTCACGGTGTCCTCGGTGGA
 
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rJMSF036P05+          CTCCATCGTGCCCGTGCAGTCTCCTAGGCACGGGTGCAACATGACCATGTCGTCGGGGCT
rJMSF033K22+          CTCCATCGTGCCCGTGCAGTCTCCTAGGCACGGGTGCAACATGACCATGTCGTCGGGGCT
rJMSF036M06+          CTCCATCGTGCCCGTGCAGTCTCCTAGGCACGGGTGCAACATGACCATGTCGTCGGGGCT
rJMSF049F04+          CTCCATCGTGCCCGTGCAGTCTCCTAGGCACGGGTGCAACATGACCATGTCGTCGGGGCT
                      ____________________________________________________________
consensus             CTCCATCGTGCCCGTGCAGTCTCCTAGGCACGGGTGCAACATGACCATGTCGTCGGGGCT
 
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rJMSF024N18+           GACAGCACGCAGACAGAAGTTGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
rJMSF036P05+          CGACAGCACGCAGACAGAAGTCGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
rJMSF033K22+          CGACAGCACGCAGACAGAAGTCGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
rJMSF036M06+          CGACAGCACGCAGACAGAAGTCGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
rJMSF049F04+          CGACAGCACGCAGACAGAAGTCGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
                      ____________________________________________________________
consensus             CGACAGCACGCAGACAGAAGTCGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
 
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rJMSF024N18+          GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
rJMSF036P05+          GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
rJMSF033K22+          GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
rJMSF036M06+          GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
rJMSF049F04+          GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
                      ____________________________________________________________
consensus             GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
 
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rJMSF024N18+          GAAGATCGCCATCGNCTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
rJMSF036P05+          GAAGATCGCCATCGACTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
rJMSF033K22+          GAAGATCGCCATCGACTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
rJMSF036M06+          GAAGATCGCCATCGACTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
rJMSF049F04+          GAAGATCGCCATCGACTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
                      ____________________________________________________________
consensus             GAAGATCGCCATCGACTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
 
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rJMSF024N18+          AATTTTCAATGTGCCTCATGAGAGCCTCTTGAA                           
rJMSF036P05+          AATTTTCAATGTGCCTCATGAGAGCCTCTTGAACGT                        
rJMSF033K22+          AATTTTCAATGTGCCTCATGAGAGCCTCTTGAACGT                        
rJMSF036M06+          AATTTTCAATGTGCCTCATGAGAGCCTCTTGAACGT                        
rJMSF049F04+          AATTTTCAATGTGCCTCATGAGAGCCTCTTGAACGTGGACAGATTATATATGTATGAATT
                      ____________________________________________________________
consensus             AATTTTCAATGTGCCTCATGAGAGCCTCTTGAACGTGGACAGATTATATATGTATGAATT