Contig 011431:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046O14Sequence597011431 (2)ref|XP_010318270.1|4e-93PREDICTED: serine/threonine-protein kinase TIO isoform X1 [Solanum lycopersicum
JMSF049D20Sequence701024290gb|KDO81255.1|9e-115hypothetical protein CISIN_1g0007061mg, partial [Citrus sinensis] gb|KDO81256.1|806011431 (2)ref|XP_009617966.1|2e-125PREDICTED: serine/threonine-protein kinase TIO [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF049D20+ AGAGAAGTCATAGTCGATGTTCTCAT
                      ____________________________________________________________
consensus AGAGAAGTCATAGTCGATGTTCTCAT
 
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rJMSF049D20+ GATGTTTCAGATTTAGCTCGCATGGACAAGGTTTTTCTATGAATACATCGATGCAGCAGA
                      ____________________________________________________________
consensus GATGTTTCAGATTTAGCTCGCATGGACAAGGTTTTTCTATGAATACATCGATGCAGCAGA
 
. : . : . : . : . : . :
rJMSF049D20+ TATAGTGGAATTTCTCAAGGAATTTTTGACCCACGAAGATCCCAATGTTCGTGCAAAGGC
                      ____________________________________________________________
consensus TATAGTGGAATTTCTCAAGGAATTTTTGACCCACGAAGATCCCAATGTTCGTGCAAAGGC
 
. : . : . : . : . : . :
rJMSF046O14+ AA
rJMSF049D20+ ATGCAGTGCCATTGGGAATATGTGTCGGCATAGCTCCTATTTCTATGATGTACTGGGAAA
                      ____________________________________________________________
consensus ATGCAGTGCCATTGGGAATATGTGTCGGCATAGCTCCTATTTCTATGATGTACTGGGAAA
 
. : . : . : . : . : . :
rJMSF046O14+ ACATCAAATCATTAGTCTCCTCATAGACAGATGCGCTGATTCTGACAAAAGAACACAGAA
rJMSF049D20+ ACATCAAATCATTAGTCTCCTCATAGACAGATGCGCTGATTCTGACAAAAGAACACAGAA
                      ____________________________________________________________
consensus ACATCAAATCATTAGTCTCCTCATAGACAGATGCGCTGATTCTGACAAAAGAACACAGAA
 
. : . : . : . : . : . :
rJMSF046O14+ ATNTGCTTGCTTTGCCATTGGCAATGCTGCCTATCATAGTGACTTGTTGTACGATGAGTT
rJMSF049D20+ ATTTGCTTGCTTTGCCATTGGCAATGCTGCCTATCATAGTGACTTGTTGTACGATGAGTT
                      ____________________________________________________________
consensus ATTTGCTTGCTTTGCCATTGGCAATGCTGCCTATCATAGTGACTTGTTGTACGATGAGTT
 
. : . : . : . : . : . :
rJMSF046O14+ GAGACGAGCAATACCTCAGCTTTCTTATTTACTTCTTTCGGCTGAGGAGGACAAAACCAA
rJMSF049D20+ GAGACGAGCAATACCTCAGCTTTCTTATTTACTTCTTTCGGCTGAGGAGGACAAAACCAA
                      ____________________________________________________________
consensus GAGACGAGCAATACCTCAGCTTTCTTATTTACTTCTTTCGGCTGAGGAGGACAAAACCAA
 
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rJMSF046O14+ GGCTAATGCTGCTGGTGCACTCAGCAATCTTGTCCGCAACTCCAACAAGCTCTGCGAAGA
rJMSF049D20+ GGCTAATGCTGCTGGTGCACTCAGCAATCTTGTCCGCAACTCCAACAAGCTCTGCGAAGA
                      ____________________________________________________________
consensus GGCTAATGCTGCTGGTGCACTCAGCAATCTTGTCCGCAACTCCAACAAGCTCTGCGAAGA
 
. : . : . : . : . : . :
rJMSF046O14+ CATCATCTCCAAAGGAGCCATGCAGGCTCTACTGAAGTTGGTAGCAGATTACTCAGTCCT
rJMSF049D20+ CATCATCTCCAAAGGAGCCATGCAGGCTCTACTGAAGTTGGTAGCAGATTACTCAGTCCT
                      ____________________________________________________________
consensus CATCATCTCCAAAGGAGCCATGCAGGCTCTACTGAAGTTGGTAGCAGATTACTCAGTCCT
 
. : . : . : . : . : . :
rJMSF046O14+ AGCGCTTAATCCAAGCAGAAGGGATTCTTTGCATGAGTCGCCTCTAAAGATTGCGCTTTT
rJMSF049D20+ AGCGCTTAATCCAAGCAGAAGGGATTCTTTGCATGAGTCGCCTCTAAAGATTGCGCTTTT
                      ____________________________________________________________
consensus AGCGCTTAATCCAAGCAGAAGGGATTCTTTGCATGAGTCGCCTCTAAAGATTGCGCTTTT
 
. : . : . : . : . : . :
rJMSF046O14+ CTCATTGGCAAAAATGTGTGCTCATCCGCCTTGCAGACACTTCCTCCGTTCATCAGAGTT
rJMSF049D20+ CTCATTGGCAAAAATGTGTGCTCATCCGCCTTGCAGACACTTCCTCCGTTCATCAGAGTT
                      ____________________________________________________________
consensus CTCATTGGCAAAAATGTGTGCTCATCCGCCTTGCAGACACTTCCTCCGTTCATCAGAGTT
 
. : . : . : . : . : . :
rJMSF046O14+ GTTCCCAGTGATTAGGCAGCTTCAGCAGTCACCAGAATCAACAATTGGAAATTATGCCTC
rJMSF049D20+ GTTCCCAGTGATTAGGCAGCTTCAGCAGTCACCAGAATCAACAATTGGAAATTATGCCTC
                      ____________________________________________________________
consensus GTTCCCAGTGATTAGGCAGCTTCAGCAGTCACCAGAATCAACAATTGGAAATTATGCCTC
 
. : . : . : . : . : . :
rJMSF046O14+ TGTGATTGTCAGAAAAGCTGCAGAAGCTTAGATTAGTAGTCAAGTAGCTAATGCAAAACT
rJMSF049D20+ TGTGATTGTCAGAAAAGCTGCAGAAGCTTAGATTAGTAGTCAAGTAGCTAATGCAAAACT
                      ____________________________________________________________
consensus TGTGATTGTCAGAAAAGCTGCAGAAGCTTAGATTAGTAGTCAAGTAGCTAATGCAAAACT
 
. : . : . : . : . : . :
rJMSF046O14+ TAGATTGGAAGTGTTCTTGTATTCGAACAAACAGAATATTT
rJMSF049D20+ TAGATTGGAAGTGTTCTTGTATTCGAACAAACAGAATATTTTAGTAAATATATTCATCAT
                      ____________________________________________________________
consensus TAGATTGGAAGTGTTCTTGTATTCGAACAAACAGAATATTTTAGTAAATATATTCATCAT