Contig 011426:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF048J18Sequence646008074 (2)ref|XP_004238196.1|2e-37PREDICTED: lysine histidine transporter-like 8 [Solanum lycopersicum]736011426 (2)ref|XP_010539056.1|2e-59PREDICTED: lysine histidine transporter-like 8 [Tarenaya hassleriana]
JMSF048L17Sequence725008074 (2)ref|XP_004238196.1|4e-110PREDICTED: lysine histidine transporter-like 8 [Solanum lycopersicum]773011426 (2)ref|XP_009788292.1|1e-79PREDICTED: lysine histidine transporter-like 8 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF048L17+              CGATGCCATCAACCTTCAAGCACCCAGCTCATGTGCCAATGTGGAAGGAGCAAAGG
                      ____________________________________________________________
consensus                 CGATGCCATCAACCTTCAAGCACCCAGCTCATGTGCCAATGTGGAAGGAGCAAAGG
 
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rJMSF048L17+          TTGCGTATTTCTTTATTGCATTGTGCCTGTTCCCTATTGCCATTGGAGGTTTCTGGGCTT
                      ____________________________________________________________
consensus             TTGCGTATTTCTTTATTGCATTGTGCCTGTTCCCTATTGCCATTGGAGGTTTCTGGGCTT
 
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rJMSF048L17+          ATGGAAACCTTATGCCTTCAAGTGGGATTCTGAGCGCGCTGTTTCAGTTTCACATTCACG
rJMSF048J18+                     ATGCCTTCAAGTGGGATTCTGAGCGCGCTGTTTCAGTTTCACATTCACG
                      ____________________________________________________________
consensus             ATGGAAACCTTATGCCTTCAAGTGGGATTCTGAGCGCGCTGTTTCAGTTTCACATTCACG
 
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rJMSF048L17+          ATGTCCCAAGAGGTCTTTTGGCAATGGCGTTTCTCCTAGTCGTGTTCAGTTGCCTGAGTA
rJMSF048J18+          ATGTCCCAAGAGGTCTTTTGGCAATGGCGTTTCTCCTAGTCGTGTTCAGTTGCCTGAGTA
                      ____________________________________________________________
consensus             ATGTCCCAAGAGGTCTTTTGGCAATGGCGTTTCTCCTAGTCGTGTTCAGTTGCCTGAGTA
 
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rJMSF048L17+          GCTTCCAGATATACTCCATGCCTGGATTCGACAGCTTTGAAGCGGGCTACAGCAGCCGCA
rJMSF048J18+          GCTTCCAGATATACTCCATGCCTGGATTCGACAGCTTTGAAGCGGGCTACAGCAGCCGCA
                      ____________________________________________________________
consensus             GCTTCCAGATATACTCCATGCCTGGATTCGACAGCTTTGAAGCGGGCTACAGCAGCCGCA
 
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rJMSF048L17+          CAAACAGGCCATGCCCCATATGGGTTCGGTCTGGCTTCCGAGTGTTCTATGGCTTCTTTT
rJMSF048J18+          CAAACAGGCCATGCCCCATATGGGTTCGGTCTGGCTTCCGAGTGTTCTATGGCTTCTTTT
                      ____________________________________________________________
consensus             CAAACAGGCCATGCCCCATATGGGTTCGGTCTGGCTTCCGAGTGTTCTATGGCTTCTTTT
 
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rJMSF048L17+          CATTCTTCATAGGCGTCGCTCTCCCTTTCCTGTCGAGCTTCGCGGGGCTGCTAGGAGGAC
rJMSF048J18+          CATTCTTCATAGGCGTCGCACTCCCTTTCCTGTCGAGCTTCGCGGGGCTGCTAGGAGGAC
                      ____________________________________________________________
consensus             CATTCTTCATAGGCGTCGCTCTCCCTTTCCTGTCGAGCTTCGCGGGGCTGCTAGGAGGAC
 
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rJMSF048L17+          TCACGCTCCCAGTAACCTTCGCTTACCCATGCTTCATGTGGGCGCTTATAAAGAAGCCAA
rJMSF048J18+          TCACGCTCCCAGTAACCTTCGCTTACCCATGCTTCATGTGGGCGCTTATAAAGAAGCCAA
                      ____________________________________________________________
consensus             TCACGCTCCCAGTAACCTTCGCTTACCCATGCTTCATGTGGGCGCTTATAAAGAAGCCAA
 
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rJMSF048L17+          CCAAGTACAGCTTTAGCTGGTACTTCCACTGGACCCTCGGTTGGCTGGGCATCGCCTTCA
rJMSF048J18+          CCAAGTACAGCTTTAGCTGGTACTTCCACTGGACCCTCGGTTGGCTGGGCATCGCCTTCA
                      ____________________________________________________________
consensus             CCAAGTACAGCTTTAGCTGGTACTTCCACTGGACCCTCGGTTGGCTGGGCATCGCCTTCA
 
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rJMSF048L17+          GCTTTGCCTTCACCATTGGAGGTATTTGGAGCATGGTGTATAATGGATTGAAGCTCAAGT
rJMSF048J18+          GCTTTGCCTTCACCATTGGAGGTATTTGGAGCATGGTGTATAATGGATTGAAGCTCAAGT
                      ____________________________________________________________
consensus             GCTTTGCCTTCACCATTGGAGGTATTTGGAGCATGGTGTATAATGGATTGAAGCTCAAGT
 
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rJMSF048L17+          TCTTTAAGCCTAGCTAGCTCAAATTAAACCTGGAAATGGGGTTTATTAGCAGTGTGAAAT
rJMSF048J18+          TCTTTAAGCCTAGCTAGCTCAAATTAAACCTGGAAATGGGGTTTATTAGCAGTGTGAAAT
                      ____________________________________________________________
consensus             TCTTTAAGCCTAGCTAGCTCAAATTAAACCTGGAAATGGGGTTTATTAGCAGTGTGAAAT
 
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rJMSF048L17+          TTTCAAGAATATGGCTTGTTAATCTATGGTTTTATTTTATAGCTATCTTGGTAGGTAAAA
rJMSF048J18+          TTTCAAGAATATGGCTTGTTAATCTATGGTTTTATTTTATAGCTATCTTGGTAGGTAAAA
                      ____________________________________________________________
consensus             TTTCAAGAATATGGCTTGTTAATCTATGGTTTTATTTTATAGCTATCTTGGTAGGTAAAA
 
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rJMSF048L17+          ATGTTGAGGGTAGTAGGAGTGTATGTGTGCATTTACTTGGATACTGCTTAAGTTCTT   
rJMSF048J18+          ATGTTGAGGGTAGTAGGAGTGTATGTGTGCATTTACTTGGATACTGCTTAAGTTCTTTGA
                      ____________________________________________________________
consensus             ATGTTGAGGGTAGTAGGAGTGTATGTGTGCATTTACTTGGATACTGCTTAAGTTCTTTGA