Contig 011424:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004J05Sequence553011424 (4)ref|XP_011088723.1|2e-98PREDICTED: calcium-dependent protein kinase 5 isoform X2 [Sesamum indicum]258017983
JMSF001J17Sequence366004929 (3)emb|CDP14487.1|8e-10unnamed protein product [Coffea canephora]760011424 (4)gb|ADM88045.1|7e-93CDPK11 [Nicotiana tabacum]
JMSF003I10Sequence418004929 (3)emb|CDP14487.1|2e-09unnamed protein product [Coffea canephora]749011424 (4)ref|XP_010911424.1|1e-80PREDICTED: calcium-dependent protein kinase 4 [Elaeis guineensis]
JMSF048F19Sequence644004929 (3)ref|XP_010645740.1|5e-40PREDICTED: calcium-dependent protein kinase 26 isoform X1 [Vitis vinifera]774011424 (4)gb|ADM88045.1|4e-78CDPK11 [Nicotiana tabacum]

Alignment

This contig is upended


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JMFF004J05-                       AGATGTTTAAGGCCATGGATACTGATAATAGTGGTGCAATTACATTTG
rJMSF001J17+                                  CCATGGATACTGATAATAGTGGTGCAATTACATTTG
                      ____________________________________________________________
consensus                         AGATGTTTAAGGCCATGGATACTGATAATAGTGGTGCAATTACATTTG
 
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JMFF004J05-           ATGAACTCAAAGCTGGTTTAAGAAAATATGGGTCTACTTTAAAGGATACAGAAATACGAG
rJMSF001J17+          ATGAGCTCAAAGCTGGTTTAAGAAAATATGGATCTACTTTAAAGGATACAGAGATACGAG
rJMSF003I10+                                AAAATATGGATCTACTTTAAAGGATACAGAGATACGAG
rJMSF048F19+                                AAAATATGGATCTACTTTAAAGGATACAGAGATACGAG
                      ____________________________________________________________
consensus             ATGAGCTCAAAGCTGGTTTAAGAAAATATGGATCTACTTTAAAGGATACAGAGATACGAG
 
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JMFF004J05-           AACTAATGGATGCGGCTGATGTGGATAACAGTGGAACCATAGATTATGGAGAATTCGTAG
rJMSF001J17+          AACTAATGGATGCAGCCGATGTAGATAACAGTGGGACCATTGATTATGGAGAATTCATAG
rJMSF003I10+          AACTAATGGATGCAGCCGATGTAGATAACAGTGGGACCATTGATTATGGAGAATTCATAG
rJMSF048F19+          AACTAATGGATGCAGCCGATGTAGATAACAGTGGGACCATTGATTATGGAGAATTCATAG
                      ____________________________________________________________
consensus             AACTAATGGATGCAGCCGATGTAGATAACAGTGGGACCATTGATTATGGAGAATTCATAG
 
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JMFF004J05-           CAGCGACAATTCACCTTAACAAATTAGAACGTGAAGAACATCTTGTTGCAGCATTTCAAT
rJMSF001J17+          CAGCTACTATTCACCTTAACAAACTAGAACGTGAGGAACATCTTATGGCTGCGTTTCAAT
rJMSF003I10+          CAGCTACTATTCACCTTAACAAACTAGAACGTGAGGAACATCTTATGGCTGCGTTTCAAT
rJMSF048F19+          CAGCTACTATTCACCTTAACAAACTAGAACGTGAGGAACATCTTATGGCTGCGTTTCAAT
                      ____________________________________________________________
consensus             CAGCTACTATTCACCTTAACAAACTAGAACGTGAGGAACATCTTATGGCTGCGTTTCAAT
 
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JMFF004J05-           ACTTTGACAAGGATGGAAGTGGTTATATTACAGTTGATGAGCTCCAGCAAGCTTGTGTAG
rJMSF001J17+          ATTTTGACAAGGATGGAAGTGGATATATTACAGTTGATGAGCTCCAGCAAGCTTGTATAG
rJMSF003I10+          ATTTTGACAAGGATGGAAGTGGATATATTACAGTTGATGAGCTCCAGCAAGCTTGTATAG
rJMSF048F19+          ATTTTGACAAGGATGGAAGTGGATATATTACAGTTGATGAGCTCCAGCAAGCTTGTATAG
                      ____________________________________________________________
consensus             ATTTTGACAAGGATGGAAGTGGATATATTACAGTTGATGAGCTCCAGCAAGCTTGTATAG
 
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JMFF004J05-           AACATAACATGACAGATGTTTTTTTTGAAGATATAATCAGAGAAGTGGATCAAGATAATG
rJMSF001J17+          AACATAATATCACAGATGTTCTCTATGAAGATATTATCCGAGAAGTTGATCAGGATAATG
rJMSF003I10+          AACATAATATCACAGATGTTCTCTATGAAGATATTATCCGAGAAGTTGATCAGGATAATG
rJMSF048F19+          AACATAATATCACAGATGTTCTCTATGAAGATATTATCCGAGAAGTTGATCAGGATAATG
                      ____________________________________________________________
consensus             AACATAATATCACAGATGTTCTCTATGAAGATATTATCCGAGAAGTTGATCAGGATAATG
 
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JMFF004J05-           ATGGGCGGATTGATTATGGAGAGTTTGTTGCTATGATGACAAAAGGAAATGCGGGCATTG
rJMSF001J17+          ATGGAAGGATAGATTATGGGGAATTTGTTGCCATGATGACAAAAGGAAATGTAGGTATTG
rJMSF003I10+          ATGGAAGGATAGATTATGGGGAATTTGTTGCCATGATGACAAAAGGAAATGTAGGTATTG
rJMSF048F19+          ATGGAAGGATAGATTATGGGGAATTTGTTGCCATGATGACAAAAGGAAATGTAGGTATTG
                      ____________________________________________________________
consensus             ATGGAAGGATAGATTATGGGGAATTTGTTGCCATGATGACAAAAGGAAATGTAGGTATTG
 
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JMFF004J05-           GAAGACGAACTATGCGAAACAGTTTGAATATCAGTATGAGAGATG               
rJMSF001J17+          GAAGACGAACTATGAGAAACAGTCTGAATATCAGCATGAGAGATGTACCTGGAGCTCACT
rJMSF003I10+          GAAGACGAACTATGAGAAACAGTCTGAATATCAGCATGAGAGATGTACCTGGAGCTCACT
rJMSF048F19+          GAAGACGAACTATGAGAAACAGTCTGAATATCAGCATGAGAGATGTACCTGGAGCTCACT
                      ____________________________________________________________
consensus             GAAGACGAACTATGAGAAACAGTCTGAATATCAGCATGAGAGATGTACCTGGAGCTCACT
 
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rJMSF001J17+          AGCTTTTTGTGAGATGCATCATCTGGAGGTTGTAGAGAAATGACAGCAGATGATGATGAG
rJMSF003I10+          AGCTTTTTGTGAGATGCATCATCTAGAGGTTGTAGAGAAATGACAGCAGATGATGATGAG
rJMSF048F19+          AGCTTTTTGTGAGATGCATCATCTAGAGGTTGTAGAGAAATGACAGCAGATGATGATGAG
                      ____________________________________________________________
consensus             AGCTTTTTGTGAGATGCATCATCTAGAGGTTGTAGAGAAATGACAGCAGATGATGATGAG
 
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rJMSF001J17+          TGATTGATTGATTAGATGAGAAGAAACGTGTCCTTCCTTCCTTCCTTCCTTCCCAAGTAC
rJMSF003I10+          TGATTGATTGATTAGATGAGAAGAAACGTGTCCTTCCTTCCTTCCTTCCTTCCCAAGTAC
rJMSF048F19+          TGATTGATTGATTAGATGAGAAGAAACGTGTCCTTCCTTCCTTCCTTCCTTCCCAAGTAC
                      ____________________________________________________________
consensus             TGATTGATTGATTAGATGAGAAGAAACGTGTCCTTCCTTCCTTCCTTCCTTCCCAAGTAC
 
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rJMSF001J17+          TGTGAAGGCAGCAGCAAAATCAGAGTTGTGAGGGTGAAGCATGCATATGCAGTAAATCTC
rJMSF003I10+          TGTGAAGGCAGCAGCAAAATCAGAGTTGTGAGGGTGAAGCATGCATATGCAGTAAATCTC
rJMSF048F19+          TGTGAAGGCAGCAGCAAAATCAGAGTTGTGAGGGTGAAGCATGCATATGCAGTAAATCTC
                      ____________________________________________________________
consensus             TGTGAAGGCAGCAGCAAAATCAGAGTTGTGAGGGTGAAGCATGCATATGCAGTAAATCTC
 
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rJMSF001J17+          TTGCTTAGTGTCATTGGGTGCTCACAGATAGTGTTGTAAGCTTTGTAGACTCAAGTGTGC
rJMSF003I10+          TTGCTTAGTGTCATTGGGTGCTCACAGATAGTGTTGTAAGCTTTGTAGACTCAAGTGTGC
rJMSF048F19+          TTGCTTAGTGTCATTGGGTGCTCACAGATAGTGTTGTAAGCTTTGTAGACTCAAGTGTGC
                      ____________________________________________________________
consensus             TTGCTTAGTGTCATTGGGTGCTCACAGATAGTGTTGTAAGCTTTGTAGACTCAAGTGTGC
 
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rJMSF001J17+          AAAATTATTTTAGTTACTGGCTATGGCTATATTTGTTTTGCAGTATTCTTGGGGTTGTGG
rJMSF003I10+          AAAATTATTTTAGTTACTGGCTATGGCTATATTTGTTTTGCAGTATTCTTGGGGTTGTGG
rJMSF048F19+          AAAATTATTTTAGTTACTGGCTATGGCTATATTTGTTTTGCAGTATTCTTGGGGTTGTGG
                      ____________________________________________________________
consensus             AAAATTATTTTAGTTACTGGCTATGGCTATATTTGTTTTGCAGTATTCTTGGGGTTGTGG
 
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rJMSF001J17+          TTAC                                                        
rJMSF003I10+          TTACTACTTACTAGGAGGGAAATGGTTGGTGTTAATGATGTAG                 
rJMSF048F19+          TTACTACTTACTAGGAGGGAAATGGTTGGTGTTAATGATGTAGCCTTGTGGAATCAATTT
                      ____________________________________________________________
consensus             TTACTACTTACTAGGAGGGAAATGGTTGGTGTTAATGATGTAGCCTTGTGGAATCAATTT