Contig 011421:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP001H12Sequence407011421 (3)
JMSF008P04Sequence340006407 (3)ref|XP_009794471.1|2e-07PREDICTED: plastidial pyruvate kinase 2 [Nicotiana sylvestris]750011421 (3)ref|XP_009627814.1|1e-85PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis]
JMSF047D04Sequence653006407 (3)ref|XP_009627814.1|7e-95PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis]741011421 (3)ref|XP_009794471.1|2e-70PREDICTED: plastidial pyruvate kinase 2 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF008P04+ CTGAAGCAACAATTGTNGGCGG
                      ____________________________________________________________
consensus CTGAAGCAACAATTGTNGGCGG
 
. : . : . : . : . : . :
rJMSF008P04+ TGAAACACCACAGAATCTAGGCCAAGCTTTCAAGAACCATATGAGTGAAATGTTTGCTTT
rJMSF047D04+ TATGAGTGAAATGTTTGCTTT
                      ____________________________________________________________
consensus TGAAACACCACAGAATCTAGGCCAAGCTTTCAAGAACCATATGAGTGAAATGTTTGCTTT
 
. : . : . : . : . : . :
rJMSF008P04+ CCACGCAACCATGATGTCTAACACTCTTGGAACTTCAATAGTTGTTTTCACAAGAACTGG
rJMSF047D04+ CCACGCAACCATGATGTCTAACACTCTTGGAACTTCAATAGTTGTTTTCACAAGAACTGG
                      ____________________________________________________________
consensus CCACGCAACCATGATGTCTAACACTCTTGGAACTTCAATAGTTGTTTTCACAAGAACTGG
 
. : . : . : . : . : . :
rJMSF008P04+ TTTCATGGGCATACTACTGAGCCATTACCGACCTTCTGGCACTATTTTTGCCTTCACAAA
rJMSF047D04+ TTTCATGGGCATACTACTGAGCCATTACCGACCTTCTGGCACTATTTTTGCCTTCACAAA
                      ____________________________________________________________
consensus TTTCATGGGCATACTACTGAGCCATTACCGACCTTCTGGCACTATTTTTGCCTTCACAAA
 
. : . : . : . : . : . :
rJMSF008P04+ TGAGAAGAAGATACAACAGAGATTAGCTTTGTACCAAGGCATATGCCCCATATACATGGA
rJMSF047D04+ TGAGAAGAAGATACAACAGAGATTAGCTTTGTACCAAGGCATATGCCCCATATACATGGA
                      ____________________________________________________________
consensus TGAGAAGAAGATACAACAGAGATTAGCTTTGTACCAAGGCATATGCCCCATATACATGGA
 
. : . : . : . : . : . :
rJMSF008P04+ GTTCTCTAGTGATGCTGAGGAGACATTTACAAATGCATTGTCGGTGCTGCAGAAGCAAGG
rJMSF047D04+ GTTCTCTAGTGATGCTGAGGAGACATTTACAAATGCATTGTCGGTGCTGCAGAAGCAAGG
                      ____________________________________________________________
consensus GTTCTCTAGTGATGCTGAGGAGACATTTACAAATGCATTGTCGGTGCTGCAGAAGCAAGG
 
. : . : . : . : . : . :
rJMSF008P04+ AATGGTGAAGGAAGGAGAACAGGTAGCACTTGTTCAGAGTGGCCAACAACCTATCTGGCG
rJMCP001H12- ACAACCTATCTGGCG
rJMSF047D04+ AATGGTGAAGGAAGGAGAACAGGTAGCACTTGTTCAGAGTGGCCAACAACCTATCTGGCG
                      ____________________________________________________________
consensus AATGGTGAAGGAAGGAGAACAGGTAGCACTTGTTCAGAGTGGCCAACAACCTATCTGGCG
 
. : . : . : . : . : . :
rJMSF008P04+ GCTTCAATCCACTCACAACATTCAGGTTAGGAAGGTTTAGACAGAGACCATGAAAGATCC
rJMCP001H12- GCTTCAATCCACTCACAACATTCAGGTTAGGAAGGTTTAGACAGAGACCATGAAAGATCC
rJMSF047D04+ GCTTCAATCCACTCACAACATTCAGGTTAGGAAGGTTTAGACAGAGACCATGAAAGATCC
                      ____________________________________________________________
consensus GCTTCAATCCACTCACAACATTCAGGTTAGGAAGGTTTAGACAGAGACCATGAAAGATCC
 
. : . : . : . : . : . :
rJMSF008P04+ ACCATCCATGTATGCTTCCCTGCTTGGTAGAATTTTCCTTCAATTATCAGATAAATTCCT
rJMCP001H12- ACCATCCATATATGCTTCCCTGCTTGGTAGAATTTTCCTTCAATTATCAGATAAATTCCT
rJMSF047D04+ ACCATCCATGTATGCTTCCCTGCTTGGTAGAATTTTCCTTCAATTATCAGATAAATTCCT
                      ____________________________________________________________
consensus ACCATCCATGTATGCTTCCCTGCTTGGTAGAATTTTCCTTCAATTATCAGATAAATTCCT
 
. : . : . : . : . : . :
rJMSF008P04+ TACTAATTACGAGGCAGCTTGGTTTTAGTTTGTTGTATTTTTTTTCCTACCCCCATTTCT
rJMCP001H12- TACTAATTACGAGGCAGCTTGGTTTTAGTTCGTTGTATTTTTTTTCCTACCCCCATTTCT
rJMSF047D04+ TACTAATTACGAGGCAGCTTGGTTTTAGTTTGTTGTATTTTTTTTCCTACCCCCATTTCT
                      ____________________________________________________________
consensus TACTAATTACGAGGCAGCTTGGTTTTAGTTTGTTGTATTTTTTTTCCTACCCCCATTTCT
 
. : . : . : . : . : . :
rJMSF008P04+ GGTGAACACAGCGTGAAAGAGTGTTGTAGTGAGTTTATGGTTAGCATATCCTTTACACTT
rJMCP001H12- GGTGAACACAGCGTGAAAGAGTGTTGTAGTGAGTTTATGGTTAGCATATCCTTTACACTT
rJMSF047D04+ GGTGAACACAGCGTGAAAGAGTGTTGTAGTGAGTTTATGGTTAGCATATCCTTTACACTT
                      ____________________________________________________________
consensus GGTGAACACAGCGTGAAAGAGTGTTGTAGTGAGTTTATGGTTAGCATATCCTTTACACTT
 
. : . : . : . : . : . :
rJMSF008P04+ TTACAGTTTGGTAAAGAAGTTGAATACTGTTAATGTTGATGCGGCATACTTACTCGTGAT
rJMCP001H12- TTACAGTTTGGTAAAGAAGTTGAATACTGTTAATGTTGATGCGGCATACTTACTCGTGAT
rJMSF047D04+ TTACAGTTTGGTAAAGAAGTTGAATACTGTTAATGTTGATGCGGCATACTTACTCGTGAT
                      ____________________________________________________________
consensus TTACAGTTTGGTAAAGAAGTTGAATACTGTTAATGTTGATGCGGCATACTTACTCGTGAT
 
. : . : . : . : . : . :
rJMSF008P04+ GTTGCCCATGTTTAAAATGTATGATTGTAGTGAATTCTCATGAATCATTATGTACTGCTA
rJMCP001H12- GTTGCCCATGTTTAAAATGTATGATTGTAGTGAATTCTCATGAATCATTATGTACTGCTA
rJMSF047D04+ GTTGCCCATGTTTAAAATGTATGATTGTAGTGAATTCTCATGAATCATTATGTACTGCTA
                      ____________________________________________________________
consensus GTTGCCCATGTTTAAAATGTATGATTGTAGTGAATTCTCATGAATCATTATGTACTGCTA
 
. : . : . : . : . : . :
rJMSF008P04+ TAATGTAG
rJMCP001H12- TAATGTAGCTAAGTAGCTTAATTGTATTATC
rJMSF047D04+ TAATGTAGCTAAGTAGCTTAATTGTATTATCATATCATGAACAAACTTGTATACAAATAA
                      ____________________________________________________________
consensus TAATGTAGCTAAGTAGCTTAATTGTATTATCATATCATGAACAAACTTGTATACAAATAA