Contig 011417:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022L20Sequence660000960 (2)ref|XP_009604417.1|1e-59PREDICTED: probable receptor protein kinase TMK1 [Nicotiana tomentosiformis]756011417 (2)ref|XP_009787090.1|5e-38PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Nicotiana sylvestr
JMSF046G12Sequence258000960 (2)ref|XP_009604417.1|2e-05PREDICTED: probable receptor protein kinase TMK1 [Nicotiana tomentosiformis]764011417 (2)ref|XP_009787090.1|6e-38PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Nicotiana sylvestr

Alignment

This contig is upended


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rJMSF022L20+                            AGACATCATATCGGCGACCCAATATGGAACATGNTATAAACG
rJMSF046G12+                          CAAGACATCATATCGGCGACCCAATATGGAACATGTTATAAACG
                      ____________________________________________________________
consensus                             CAAGACATCATATCGGCGACCCAATATGGAACATGTTATAAACG
 
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rJMSF022L20+          TCCTCAGTCCTCTTGTACAGAAGTGGAAGCCTTTGAAACTCGAAGAAATTGGGGATAGAA
rJMSF046G12+          TCCTCAGTCCTCTTGTACAGAAGTGGAAGCCTTTGAAACTCGAAGAAATTGGGGATAGAA
                      ____________________________________________________________
consensus             TCCTCAGTCCTCTTGTACAGAAGTGGAAGCCTTTGAAACTCGAAGAAATTGGGGATAGAA
 
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rJMSF022L20+          ATGGTGGCCTTAACCTTCACATCAGCCTCCCTCTCCAGTTTGATGACTTATCCACTCAAA
rJMSF046G12+          ATGGTGGCCTTAACCTTCACATCAGCCTCCCTCTCCAGTTTGANGACTTATCCACTCAAA
                      ____________________________________________________________
consensus             ATGGTGGCCTTAACCTTCACATCAGCCTCCCTCTCCAGTTTGATGACTTATCCACTCAAA
 
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rJMSF022L20+          ATCAAAATTTGTCCTCCACGGATGACCAATTTTGTGGATATCGTCTCAATCAGAGTGCAC
rJMSF046G12+          ATCAAAATTTGTCCTCCACGGATGACCAATTTTGTGGATATCGTCTCAATCAGAGTGCAC
                      ____________________________________________________________
consensus             ATCAAAATTTGTCCTCCACGGATGACCAATTTTGTGGATATCGTCTCAATCAGAGTGCAC
 
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rJMSF022L20+          GATTTTAATTTACACAAAATCTTAAGGCTTATGTGCATGAAGTGCTTCTTAATTGATTCC
rJMSF046G12+          GATTTTAATTTACACAAAATCTTAAGGCTTATGTGCATGAAGTGCTTCTTAATTGATTCC
                      ____________________________________________________________
consensus             GATTTTAATTTACACAAAATCTTAAGGCTTATGTGCATGAAGTGCTTCTTAATTGATTCC
 
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rJMSF022L20+          AGAAGGGAAGTTGAGGTGCAAGGAGGAAGATAGTGTGTTGGTGTACGCAAGTCGAGGTTC
rJMSF046G12+          AGAAGGGAAGTTGAGGTGCAAGGAGGAAGATAGTGTGTTGGTGTACGCAAGTCGAGGTTC
                      ____________________________________________________________
consensus             AGAAGGGAAGTTGAGGTGCAAGGAGGAAGATAGTGTGTTGGTGTACGCAAGTCGAGGTTC
 
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rJMSF022L20+          TGCAACACTCGTCTATTGGGTGTTTCTTAACTTAATGCGGATGAAACTTAACGATAGAAA
rJMSF046G12+          TGCAACACTCGTCTATTGGGTGTTTCTTAACTTAATGCGGATGAAACTTAACGATAGAAA
                      ____________________________________________________________
consensus             TGCAACACTCGTCTATTGGGTGTTTCTTAACTTAATGCGGATGAAACTTAACGATAGAAA
 
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rJMSF022L20+          GTTTGGTATTCGGGATGCTTGTTTTGGTATGCTCGTTGTGAAGTGACCAATGTTGCAACG
rJMSF046G12+          GTTTGGTATTCGGGATGCTTGTTTTGGTATGCTCGTTGTGAAGTGACCAATGTTGCAACG
                      ____________________________________________________________
consensus             GTTTGGTATTCGGGATGCTTGTTTTGGTATGCTCGTTGTGAAGTGACCAATGTTGCAACG
 
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rJMSF022L20+          CTAAGCTGGTTCAAGATGTTTGGAGAACAGGGGCGAGAGTGAAAGCCAATGAGGACGGCA
rJMSF046G12+          CTAAGCTGGTTCAAGATGTTTGGAGAACAGGGGCGAGAGTGAAAGCCAATGAGGACGGCA
                      ____________________________________________________________
consensus             CTAAGCTGGTTCAAGATGTTTGGAGAACAGGGGCGAGAGTGAAAGCCAATGAGGACGGCA
 
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rJMSF022L20+          TTGTTGAAGCTCGCGAGCTCAAGAGATGCATAGAATGTGTAATGGGAGAGGGAGGAGCTG
rJMSF046G12+          TTGTTGAAGCTCGCGAGCTCAAGAGATGCATAGAATGTGTAATGGGAGAGGGAGGAGCTG
                      ____________________________________________________________
consensus             TTGTTGAAGCTCGCGAGCTCAAGAGATGCATAGAATGTGTAATGGGAGAGGGAGGAGCTG
 
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rJMSF022L20+          AGTTGAGAAAGAATGCTAAAAAATGAAGAGATTTACCAAGAAGTAGCATGAAAGAATGTG
rJMSF046G12+          AGTTGAGAAAGAATGCTAAAAAATGAAGAGATTTACCAAGAAGTAGCATGAAAGAATGTG
                      ____________________________________________________________
consensus             AGTTGAGAAAGAATGCTAAAAAATGAAGAGATTTACCAAGAAGTAGCATGAAAGAATGTG
 
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rJMSF022L20+          GATAGGATCTTCCTATTTCAATCTCATGGCTTATGTGCATGGAGTGCTTCTTCCTATTAA
rJMSF046G12+          GATAGGATCTTCCTATTTCAATCTCATGGCTTATGTGCATGGAGTGCTTCTTCCTATTAA
                      ____________________________________________________________
consensus             GATAGGATCTTCCTATTTCAATCTCATGGCTTATGTGCATGGAGTGCTTCTTCCTATTAA
 
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rJMSF022L20+          TTTATTAATTAATCACTATTGTAGATTTTCTCTCAATTATTGTGCTTAATGCAT      
rJMSF046G12+          TTTATTAATTAATCACTATTGTAGATTTTCTCTCAATTATTGTGCTTAATGCATTATTAA
                      ____________________________________________________________
consensus             TTTATTAATTAATCACTATTGTAGATTTTCTCTCAATTATTGTGCTTAATGCATTATTAA