Contig 011414:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005C11Sequence335012041 (4)gb|AFZ41795.1|3e-47putative progesterone 5-beta-reductase [Duboisia hopwoodii]115011414 (4)
JMSF024K03Sequence691010569 (5)ref|XP_009616762.1|198PREDICTED: uncharacterized protein LOC104109239 [Nicotiana tomentosiformis]789011414 (4)ref|XP_010096275.1|3e-78hypothetical protein L484_027013 [Morus notabilis] gb|EXB63670.1| hypothetical p
JMSF031C02Sequence599010569 (5)ref|XP_009800283.1|130PREDICTED: uncharacterized protein LOC104246216 [Nicotiana sylvestris]702011414 (4)ref|XP_010096275.1|2e-61hypothetical protein L484_027013 [Morus notabilis] gb|EXB63670.1| hypothetical p
JMSF045B16Sequence755010569 (5)ref|XP_009616762.1|222PREDICTED: uncharacterized protein LOC104109239 [Nicotiana tomentosiformis]715011414 (4)ref|XP_010096275.1|8e-50hypothetical protein L484_027013 [Morus notabilis] gb|EXB63670.1| hypothetical p

Alignment

This contig is upended


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rJMSF024K03+                                                 TGGCTGCTGGTTTTACAAATG
                      ____________________________________________________________
consensus                                                    TGGCTGCTGGTTTTACAAATG
 
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rJMSF024K03+          CTTNGGCTGGACTAGCTCCAAATGATATGATACAACGGACTGTGGGGAGACTGGAATCTC
                      ____________________________________________________________
consensus             CTTNGGCTGGACTAGCTCCAAATGATATGATACAACGGACTGTGGGGAGACTGGAATCTC
 
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rJMSF024K03+          TCCACTCTGAGGGTGTTCATAGGCTTTCAGAA-GTGTGTTGCTCTGCTGTTA-CCCAAAT
rJMSF031C02+                    GGGTGTTCATAGGCTTTCAGAA-GTGTGTTGCTCTGCTGTTA-CCCAAAT
rJMSF045B16+                    GGGTGTTCATAGGCTTTCAGAANGTGTGTTGCTCTGCTGTTACCCCAAAT
                      ____________________________________________________________
consensus             TCCACTCTGAGGGTGTTCATAGGCTTTCAGAA-GTGTGTTGCTCTGCTGTTA-CCCAAAT
 
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rJMSF024K03+          TCTCTTGCTTGGGAAATCTATCACATCTGATGCAAACAAGACTCAGAGTCCGGATGAGGA
rJMSF031C02+          TCTCTTGCTTGGGAAATCTATCACATCTGATGCAAACAAGACTCAGAGTCCGGATGAGGA
rJMSF045B16+          TCTCTTGCTTGGGAAATCTATCACATCTGATGCAAACAAGACTCAGAGTCCGGATGAGGA
                      ____________________________________________________________
consensus             TCTCTTGCTTGGGAAATCTATCACATCTGATGCAAACAAGACTCAGAGTCCGGATGAGGA
 
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rJMSF024K03+          TGTTAATGAAGTGGATATGGTGAAAATTAATTGGCCTGAGGATTCTATTGAAAAAGCTAA
rJMSF031C02+          TGTTAATGAAGTGGATATGGTGAAAATTAATTGGCCTGAGGATTCTATTGAAAAAGCTAA
rJMSF045B16+          TGTTAATGAAGTGGATATGGTGAAAATTAATTGGCCTGAGGATTCTATTGAAAAAGCTAA
                      ____________________________________________________________
consensus             TGTTAATGAAGTGGATATGGTGAAAATTAATTGGCCTGAGGATTCTATTGAAAAAGCTAA
 
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rJMSF024K03+          GATTATCCGAGCGAGGGCAGAATTGATGACTGCAAGTGTTGAGGCAGTCTGTTCCAGTTT
rJMSF031C02+          GATTATCCGAGCGAGGGCAGAATTGATGACTGCAAGTGTTGAGGCAGTCTGTTCCAGTTT
rJMSF045B16+          GATTATCCGAGCGAGGGCAGAATTGATGACTGCAAGTGTTGAGGCAGTCTGTTCCAGTTT
                      ____________________________________________________________
consensus             GATTATCCGAGCGAGGGCAGAATTGATGACTGCAAGTGTTGAGGCAGTCTGTTCCAGTTT
 
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rJMSF024K03+          TATTACAGGTATATCTGATGTGACAGAGGCATATTTAGATGCAATCAAAGCTGCTTCTGC
rJMSF031C02+          TATTACAGGTATATCTGATGTGACAGAGGCATATTTAGATGCAATCAAAGCTGCTTCTGC
rJMSF045B16+          TATTACAGGTATATCTGATGTGACAGAGGCATATTTAGATGCAATCAAAGCTGCTTCTGC
                      ____________________________________________________________
consensus             TATTACAGGTATATCTGATGTGACAGAGGCATATTTAGATGCAATCAAAGCTGCTTCTGC
 
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rJMSF024K03+          TGATTCGCATGAAACTCCCCAGAAAACAATTCAGGACAAAGTTAATGCTTTTTCAAAGGA
rJMSF031C02+          TGATTCGCATGAAACTCCCCAGAAAACAATTCAGGACAAAGTTAATGCTTTTTCAAAGGA
rJMSF045B16+          TGATTCGCATGAAACTCCCCAGAAAACAATTCAGGACAAAGTTAATGCTTTTTCAAAGGA
                      ____________________________________________________________
consensus             TGATTCGCATGAAACTCCCCAGAAAACAATTCAGGACAAAGTTAATGCTTTTTCAAAGGA
 
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rJMSF024K03+          TCTCAGTGCAGATCAGAGCACAGCTATTGGAAAAATTCAGGATGGGCTTCAATACTTGTC
rJMSF031C02+          TCTCAGTGCAGATCAGAGCACAGCTATTGGAAAAATTCAGGATGGGCTTCAATACTTGTC
rJMSF045B16+          TCTCAGTGCAGATCAGAGCACAGCTATTGGAAAAATTCAGGATGGGCTTCAATACTTGTC
                      ____________________________________________________________
consensus             TCTCAGTGCAGATCAGAGCACAGCTATTGGAAAAATTCAGGATGGGCTTCAATACTTGTC
 
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rJMSF024K03+          TTATTTGGTCATCTCTACTTCGATGCCTGCTGCCTGAGAATTAGTAGATTCACACGCTGG
rJMSF031C02+          TTATTTGGTCATCTCTACTTCGATGCCTGCTGCCTGAGAATTAGTAGATTCACACGCTGG
rJMSF045B16+          TTATTTGGTCATCTCTACTTCGATGCCTGCTGCCTGAGAATTAGTAGATTCACACGCTGG
                      ____________________________________________________________
consensus             TTATTTGGTCATCTCTACTTCGATGCCTGCTGCCTGAGAATTAGTAGATTCACACGCTGG
 
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rJMSF024K03+          TATGGGATTCTATTTTTAGTTTCTCGGTGTAAATAGTTATGCTTAGAAGTTGATTCGCTT
rJMSF031C02+          TATGGGATTCTATTTTTAGTTTCTCGGTGTAAATAGTTATGCTTAGAAGTTGATTCGCTT
rJMSF005C11+                       TTTTAGTTTCTCGGNGTAAATAGTTATGCTTAGAAGTTGATTCGCTT
rJMSF045B16+          TATGGGATTCTATTTTTAGTTTCTCGGTGTAAATAGTTATGCTTAGAAGTTGATTCGCTT
                      ____________________________________________________________
consensus             TATGGGATTCTATTTTTAGTTTCTCGGTGTAAATAGTTATGCTTAGAAGTTGATTCGCTT
 
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rJMSF024K03+          GTTCTTTATACTGGCGCCCTTTAAGTTTG-CTGTTCCGATAAATCGAAGAATTATACCCT
rJMSF031C02+          GTTCTTTATACTGGCGCCCTTTAAGTTTG-CTGTTCCGATAAATCGAAGAATTATACCCT
rJMSF005C11+          GTTCTTTATACTGGCNCCCTTTAAGTTTGCCNGTTCCGCTAAATCGAAGAATTATACCCT
rJMSF045B16+          GTTCTTTATACTGGCGCCCTTTAAGTTTG-CTGTTCCGATAAATCGAAGAATTATACCCT
                      ____________________________________________________________
consensus             GTTCTTTATACTGGCGCCCTTTAAGTTTG-CTGTTCCGATAAATCGAAGAATTATACCCT
 
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rJMSF024K03+          CCTAAGTTCTAAATCATTGTTACTGGTGCCTGGTGGGCATGTATCTACTCTAAGTTACAG
rJMSF031C02+          CCTAAGTTCTAAATCATTGTTACTGGTGCCTGGTGGGCATGTATCTACTCTAAGTTACAG
rJMSF005C11+          C                                                           
rJMSF045B16+          CCTAAGTTCTAAATCATTGTTACTGGTGCCTGGTGGGCATGTATCTACTCTAAGTTACAG
                      ____________________________________________________________
consensus             CCTAAGTTCTAAATCATTGTTACTGGTGCCTGGTGGGCATGTATCTACTCTAAGTTACAG
 
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rJMSF024K03+          ACCCTCTCCATTTTCCCCCTGTTTTTTTT                               
rJMSF031C02+          ACCCTCTCCATTTTCCCCCTGTTTTTTTTCTGAAGGGAAGATAC                
rJMSF045B16+          ACCCTCTCCATTTTCCCCCTGTTTTTTTTCTGAAGGGAAGATACCAGATATTGTATGGAT
                      ____________________________________________________________
consensus             ACCCTCTCCATTTTCCCCCTGTTTTTTTTCTGAAGGGAAGATACCAGATATTGTATGGAT