Contig 011409:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF044A05Sequence815011409 (2)ref|XP_010260020.1|1e-23PREDICTED: exocyst complex component EXO70B1-like [Nelumbo nucifera]743011409 (2)emb|CDP21592.1|4e-48unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF044A05-                                        GGGACGTAGTCTATGTTTGGTGACATCAAAT
                      ____________________________________________________________
consensus                                          GGGACGTAGTCTATGTTTGGTGACATCAAAT
 
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JMSF044A05-           GTCTATCTTCTGATGCAGAACCATTTCCACCGCAACTTCTCTTTCAGAATCAACAGAGCC
                      ____________________________________________________________
consensus             GTCTATCTTCTGATGCAGAACCATTTCCACCGCAACTTCTCTTTCAGAATCAACAGAGCC
 
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JMSF044A05-           TTGCTGTCTAGCTTGCAGTGGAGCACGAGAACGAGCCACGTGAACTTCGCGGAGACGGTT
                      ____________________________________________________________
consensus             TTGCTGTCTAGCTTGCAGTGGAGCACGAGAACGAGCCACGTGAACTTCGCGGAGACGGTT
 
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JMSF044A05-           GAACGCCGGAATCTTCGTTCATGGATGACGGACTCGAGAAGTACGACTCCGGTAAGGGAG
                      ____________________________________________________________
consensus             GAACGCCGGAATCTTCGTTCATGGATGACGGACTCGAGAAGTACGACTCCGGTAAGGGAG
 
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JMSF044A05-           ATTGGGACGACGACGGCTAGTCTGCTATGATTTCAGAAACGGTGCCGCTGTAATCGGCGA
                      ____________________________________________________________
consensus             ATTGGGACGACGACGGCTAGTCTGCTATGATTTCAGAAACGGTGCCGCTGTAATCGGCGA
 
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JMSF044A05-           GGAAAACGAGGAAGTTCATCACGTACCGAGTCAGTGGATGGATTGCGCCGCTGGAGGAGG
                      ____________________________________________________________
consensus             GGAAAACGAGGAAGTTCATCACGTACCGAGTCAGTGGATGGATTGCGCCGCTGGAGGAGG
 
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JMSF044A05-           TTTTGTGGAATCCTTCTGTATCGCCGCCCCAAACTCCAACAACATTGCTCTAATGGTGTC
                      ____________________________________________________________
consensus             TTTTGTGGAATCCTTCTGTATCGCCGCCCCAAACTCCAACAACATTGCTCTAATGGTGTC
 
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JMSF044A05-           GCCTAGCTTCGACACTGACGTTGCAGCTTGAAACTTCACGGCTGTAGTAGAATCGAAGCT
                      ____________________________________________________________
consensus             GCCTAGCTTCGACACTGACGTTGCAGCTTGAAACTTCACGGCTGTAGTAGAATCGAAGCT
 
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JMSF044A05-           GAAAGTCGATTCAATTTCCGACGAGAGGTCCGATTTAAAATGCTCCTTTGTTTGCCTCCC
                      ____________________________________________________________
consensus             GAAAGTCGATTCAATTTCCGACGAGAGGTCCGATTTAAAATGCTCCTTTGTTTGCCTCCC
 
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JMSF044A05-           CCTGCTTCTATTTCTCTTCAGTTAATTTTCTTTGCATACAAGTCTAACAATTCCTCCTTT
                      ____________________________________________________________
consensus             CCTGCTTCTATTTCTCTTCAGTTAATTTTCTTTGCATACAAGTCTAACAATTCCTCCTTT
 
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JMSF044A05-           CTCCTTTTGTTTGTCCCAACTATTTTATTCAACAGGAATGGGTTTTTCGTGACAGTAATG
                      ____________________________________________________________
consensus             CTCCTTTTGTTTGTCCCAACTATTTTATTCAACAGGAATGGGTTTTTCGTGACAGTAATG
 
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JMSF044A05-           ATTACAGCAATAGCTGGTTTCATTTTGTTTTCTCTTTTGATATGCTTAACATAGAAGTGT
                      ____________________________________________________________
consensus             ATTACAGCAATAGCTGGTTTCATTTTGTTTTCTCTTTTGATATGCTTAACATAGAAGTGT
 
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JMSF044A05-           TTCGTATTGGCTACTTTCATTGTCTTCTAGGTGAATTTGCCATTTGTACTTTGATGTGTT
rJMSF044A05+                                               TGCCATTTGTACTTNGATGTGTT
                      ____________________________________________________________
consensus             TTCGTATTGGCTACTTTCATTGTCTTCTAGGTGAATTTGCCATTTGTACTTTGATGTGTT
 
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JMSF044A05-           GTTTCATTAAGCATTGGTGGGATTATTCTTTTTCACTTTTCCTTCAAGAACATGTACTAA
rJMSF044A05+          GTTTCATTAAGCATTGGTGGGATTATTCTTTTTCACTTTTCCTTCAAGAACATGTACTAA
                      ____________________________________________________________
consensus             GTTTCATTAAGCATTGGTGGGATTATTCTTTTTCACTTTTCCTTCAAGAACATGTACTAA
 
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JMSF044A05-           TGAG                                                        
rJMSF044A05+          TGAGTTTCTTCCATCTAATGGTGACTATAAGATGATGGAGTGTGCTGCATAGGAGCCTGA
                      ____________________________________________________________
consensus             TGAGTTTCTTCCATCTAATGGTGACTATAAGATGATGGAGTGTGCTGCATAGGAGCCTGA
 
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rJMSF044A05+          GGATTTTCAATTTATAAATATGTATGTATGCAACTTCAAATGATCGCTTGTGCCAAAATT
                      ____________________________________________________________
consensus             GGATTTTCAATTTATAAATATGTATGTATGCAACTTCAAATGATCGCTTGTGCCAAAATT
 
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rJMSF044A05+          GTAGTCCCTTTGTGGTACCAACATCAAGAAGTGCTCCATGCTCCTTATCATAGAAATTTA
                      ____________________________________________________________
consensus             GTAGTCCCTTTGTGGTACCAACATCAAGAAGTGCTCCATGCTCCTTATCATAGAAATTTA
 
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rJMSF044A05+          CAGTGCATATACTGAATGCAGCTTCATTGTCCTGAAGTTCAATTATACAAGTGGTCTGAG
                      ____________________________________________________________
consensus             CAGTGCATATACTGAATGCAGCTTCATTGTCCTGAAGTTCAATTATACAAGTGGTCTGAG
 
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rJMSF044A05+          TTATCCTTAAGTCAAGGATTCTGATGCAGGAGACCCATTTGTCCGACTCTGCCTTTGGAT
                      ____________________________________________________________
consensus             TTATCCTTAAGTCAAGGATTCTGATGCAGGAGACCCATTTGTCCGACTCTGCCTTTGGAT
 
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rJMSF044A05+          AACCATACTGCTCATCAGAGAGTGGATCCTCACTATCCTCTTCACCACCTCCGTTCTCCA
                      ____________________________________________________________
consensus             AACCATACTGCTCATCAGAGAGTGGATCCTCACTATCCTCTTCACCACCTCCGTTCTCCA
 
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rJMSF044A05+          TTTTCTCTGAATTGCCAGTGACCCCATTCCGACATCAGCAAAGCACTACTTTTTAGCATT
                      ____________________________________________________________
consensus             TTTTCTCTGAATTGCCAGTGACCCCATTCCGACATCAGCAAAGCACTACTTTTTAGCATT
 
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rJMSF044A05+          TTCCACGTTCATAAAATATAGAGAAGTAGATAACATAAAATGACGCAATTATCCCTCACT
                      ____________________________________________________________
consensus             TTCCACGTTCATAAAATATAGAGAAGTAGATAACATAAAATGACGCAATTATCCCTCACT
 
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rJMSF044A05+          TACACGGCCATTTAACATAATTACAGACAGAGGACCAAAAATGTCCTCGTCACAATAAGT
                      ____________________________________________________________
consensus             TACACGGCCATTTAACATAATTACAGACAGAGGACCAAAAATGTCCTCGTCACAATAAGT
 
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rJMSF044A05+          CTGTCCATAAAATGACAAATTTTTGTATGGAGGACCAAAATTGTCTATAAGTCTAGCACC
                      ____________________________________________________________
consensus             CTGTCCATAAAATGACAAATTTTTGTATGGAGGACCAAAATTGTCTATAAGTCTAGCACC
 
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rJMSF044A05+          AAAAATGTATTTTACTCCTTTAGTTTTATTTGACAATATTGTTCTGTTTTTCAGTTTCAT
                      ____________________________________________________________
consensus             AAAAATGTATTTTACTCCTTTAGTTTTATTTGACAATATTGTTCTGTTTTTCAGTTTCAT