Contig 011408:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007G12Sequence764011408 (5)gb|ACU17345.1|5e-36unknown [Glycine max]
JMSF001A06Sequence281000669 (7)ref|XP_009804525.1|3e-32PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform 744011408 (5)gb|ACU17345.1|7e-31unknown [Glycine max]
JMSF013G14Sequence537000669 (7)ref|XP_009804525.1|1e-51PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform 738011408 (5)gb|ACU17345.1|2e-27unknown [Glycine max]
JMSF026N12Sequence684000669 (7)ref|XP_009804525.1|4e-91PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform 759011408 (5)gb|ACU17345.1|4e-29unknown [Glycine max]
JMSF043O02Sequence747000669 (7)ref|XP_009804525.1|2e-112PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform 801011408 (5)ref|XP_010243441.1|3e-42PREDICTED: serine/threonine-protein phosphatase PP2A-4 catalytic subunit-like [

Alignment

This contig is upended


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rJMSF043O02+                                                TGAAGCTTGTTGCTAGAGCACA
                      ____________________________________________________________
consensus                                                   TGAAGCTTGTTGCTAGAGCACA
 
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rJMSF001A06+                                      GCTCATGACCAAAAGGTTGGTACCATATTCAG
rJMSF026N12+                                                        GTTACCATATTCAG
rJMFF007G12+                                   TGGGCTCATGACCAAAAGGTTGTTACCATATTCAG
rJMSF013G14+                                                    GGTTGTTACCATATTCAG
rJMSF043O02+          CCAGCTGGTTATGGAGGGATTCAATNGGGCTCATGACCAAAAGGTTGTTACCATATTCAG
                      ____________________________________________________________
consensus             CCAGCTGGTTATGGAGGGATTCAATTGGGCTCATGACCAAAAGGTTGTTACCATATTCAG
 
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rJMSF001A06+          TGCTCCTAATTATTGTTATCGATGTGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
rJMSF026N12+          TGCTCCTAATTATTGTTATCGATGTGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
rJMFF007G12+          TGCTCCTAATTATTGTTATCGATGTGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
rJMSF013G14+          TGCTCCTAATTATTGTTATCGATGNGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
rJMSF043O02+          TGCTCCTAATTATTGTTATCGATGTGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
                      ____________________________________________________________
consensus             TGCTCCTAATTATTGTTATCGATGTGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
 
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rJMSF001A06+          CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
rJMSF026N12+          CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
rJMFF007G12+          CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
rJMSF013G14+          CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
rJMSF043O02+          CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
                      ____________________________________________________________
consensus             CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
 
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rJMSF001A06+          CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
rJMSF026N12+          CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
rJMFF007G12+          CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
rJMSF013G14+          CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
rJMSF043O02+          CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
                      ____________________________________________________________
consensus             CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
 
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rJMSF001A06+          AGAAGCTCACACCATAGCTGCTTAGCCTGGTGGCTTCTTAGTAATTGACACTTGCAGTTC
rJMSF026N12+          AGAAGCTCACACCATAGCTGCTTAGCCTGGTGGCTTCTTAGTAATTGACACTTGCAGTTC
rJMFF007G12+          AGAAGCTCACACCATAGCTGCTTAGCCTGGTGGCTTCTTAGTAATTGACACTTGCAGTTC
rJMSF013G14+          AGAAGCTCACNCCATAGCTGCTTAGCCTGGTGGCTTNTTAGTAATTGACACNCGCAGTTC
rJMSF043O02+          AGAAGCTCACACCATAGCTGCTTAGCCTGGTGGCTTCTTAGTAATTGACACTTGCAGTTC
                      ____________________________________________________________
consensus             AGAAGCTCACACCATAGCTGCTTAGCCTGGTGGCTTCTTAGTAATTGACACTTGCAGTTC
 
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rJMSF001A06+          TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGACTTCTCTGAGTTG
rJMSF026N12+          TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGACTTCTCTGAGTTG
rJMFF007G12+          TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGACTTCTCTGAGTTG
rJMSF013G14+          TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGANTTCTNTGAGTTG
rJMSF043O02+          TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGACTTCTCTGAGTTG
                      ____________________________________________________________
consensus             TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGACTTCTCTGAGTTG
 
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rJMSF001A06+          CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTTGATTAGGGTTCCTGCG
rJMSF026N12+          CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTTGATTAGGGTTCCTGCG
rJMFF007G12+          CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTTGATTAGGGTTCCTGCG
rJMSF013G14+          CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTNGANTAGGGTTCCTGCG
rJMSF043O02+          CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTTGATTAGGGTTCCTGCG
                      ____________________________________________________________
consensus             CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTTGATTAGGGTTCCTGCG
 
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rJMSF001A06+          TATGTATCATTTCATGCGTTAGTTTTGTTACTCGTTCTATTAATTTCCTTCCATTTTTCC
rJMSF026N12+          TATGTATCATTTCATGCGTTAGTTTTGTTACTCGTTCTATTAATTTCCTTCCATTTTTCC
rJMFF007G12+          TATGTATCATTTCATGCGTTAGTTTTGTTACTCGTTCTATTAATTTCCTTCCATTTTTCC
rJMSF013G14+          TATGTATCATTTCATGCGTTAGTTTTGTTACTCGNTCTATTAATTTCCTTCCATTNTTCC
rJMSF043O02+          TATGTATCATTTCATGCGTTAGTTTTGTTACTCGTTCTATTAATTTCCTTCCATTTTTCC
                      ____________________________________________________________
consensus             TATGTATCATTTCATGCGTTAGTTTTGTTACTCGTTCTATTAATTTCCTTCCATTTTTCC
 
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rJMSF001A06+          GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACTTGTGTTC
rJMSF026N12+          GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACTTGTGTTC
rJMFF007G12+          GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACTTGTGTTC
rJMSF013G14+          GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACNTGTGTTC
rJMSF043O02+          GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACTTGTGTTC
                      ____________________________________________________________
consensus             GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACTTGTGTTC
 
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rJMSF001A06+          CTTATATAGCATTAACGTCAGGTGCATTCTGTCTTTAGATGAAAGACCAGTCATAAAATT
rJMSF026N12+          CTTATATAGCATTAACGTCAGGTGCATTCTGTCTTTAGATGAAAGACCAGTCATAAAATT
rJMFF007G12+          CTTATATAGCATTAACGTCAGGTGCATTCTGTCTTTAGATGAAAGACCAGTCATAAAATT
rJMSF013G14+          CTTATATAGCATTAACGTCAGGNGCATTCTGTCNTTAGATGAAAGACCAGTCATAAAATT
rJMSF043O02+          CTTATATAGCATTAACGTCAGGTGCATTCTGTCTTTAGATGAAAGACCAGTCATAAAATT
                      ____________________________________________________________
consensus             CTTATATAGCATTAACGTCAGGTGCATTCTGTCTTTAGATGAAAGACCAGTCATAAAATT
 
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rJMSF001A06+          TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCATGGCGG
rJMSF026N12+          TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCATGGCGG
rJMFF007G12+          TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCATGGCGG
rJMSF013G14+          TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCANGGCGG
rJMSF043O02+          TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCATGGCGG
                      ____________________________________________________________
consensus             TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCATGGCGG
 
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rJMSF001A06+          CTGACCGGAAGCAATCTCTTCTAGGTTTAGCCACCCAAAAAAACAGAATTGCCAGGTCT-
rJMSF026N12+          CTGACCGGAAGCAATCTCTTCTAGGTTTAGCCACCC-AAAAAACAGAATTGCCAGGTCT-
rJMFF007G12+          CTGNCCGGAAGCAATCTCTTNTAGGTTTAGCCACCC-AAAAAACAGAATTGCCAGGTCTC
rJMSF013G14+          CTGACCGGAAGCAATCTCTTCTAGGTTTAGCCACCCAAAAAAACAGAATTGCCAGGTCT-
rJMSF043O02+          CTGACCGGAAGCAATCTCTTCTAGGTTTAGCCACCCAAAAAAACAGAATTGCCAGGTCT-
                      ____________________________________________________________
consensus             CTGACCGGAAGCAATCTCTTCTAGGTTTAGCCACCCAAAAAAACAGAATTGCCAGGTCT-
 
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rJMSF001A06+          TTCTGCTTTGTAGTATTGTTTTTTGTCTTTGCTGTTTGAGTATGTAAGGCTAC       
rJMSF026N12+          TTCTGCTTTGTAGTATTGTTTTTTGTCTTTGCTGTTTGAGTATGTAAGGCTAC       
rJMFF007G12+          TTCTGCTTTGTAGTATNGTTTTTTGTCTTTGCNGTTTGAGTATGTAAGGCTAC       
rJMSF013G14+          TTCTGCTTTGTAGTATTG                                          
rJMSF043O02+          TTCTGCTTTGTAGTATTGTTTTTTGTCTTTGCTGTTTGAGTATGTAAGGCTACCAACTTG
                      ____________________________________________________________
consensus             TTCTGCTTTGTAGTATTGTTTTTTGTCTTTGCTGTTTGAGTATGTAAGGCTACCAACTTG