Contig 011398:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013J04Sequence182000596 (10)765011398 (4)ref|XP_009792971.1|5e-80PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris]
JMSF019O14Sequence439000596 (10)ref|XP_009629822.1|1e-29PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana tomentosiformis]608011398 (4)ref|XP_009792971.1|3e-48PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris]
JMSF027E20Sequence541000596 (10)ref|XP_009629822.1|7e-45PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana tomentosiformis]694011398 (4)ref|XP_009792971.1|6e-64PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris]
JMSF042D07Sequence784000596 (10)ref|XP_009629822.1|3e-118PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana tomentosiformis]624011398 (4)ref|XP_009792971.1|2e-52PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF013J04+                                                   TTATTGCAATCATCGCTTC
                      ____________________________________________________________
consensus                                                      TTATTGCAATCATCGCTTC
 
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rJMSF013J04+          AGCGTCAACGAACTAATTGAACATGGGGCGCAANCAATAATAGTTCCAGGAAACTTTCCA
                      ____________________________________________________________
consensus             AGCGTCAACGAACTAATTGAACATGGGGCGCAANCAATAATAGTTCCAGGAAACTTTCCA
 
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rJMSF013J04+          ATTGGATGTTCGGCATCTTATCTGACGCACTTCATGACTGCTAATACAAGTGAATATGAT
rJMSF027E20+                                TGACGCACTTCATGACTGCTAATACAAGTGAATATGAT
                      ____________________________________________________________
consensus             ATTGGATGTTCGGCATCTTATCTGACGCACTTCATGACTGCTAATACAAGTGAATATGAT
 
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rJMSF013J04+          CCCAAAACTGGTTGTCTTAACTGGTTGAACGATTTCTCTGAATACCACAACAGATTACTT
rJMSF027E20+          CCCAAAACTGGTTGTCTTAACTGGTTGAACGATTTCTCTGAATACCACAACAGATTACTT
rJMSF019O14+                                                         CAACAGATTACTT
rJMSF042D07+                                              TCTGAATACCACAACAGATTACTT
                      ____________________________________________________________
consensus             CCCAAAACTGGTTGTCTTAACTGGTTGAACGATTTCTCTGAATACCACAACAGATTACTT
 
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rJMSF013J04+          CAAAACGAACTGGACCGCCTTAGAGAACAGTATCCAGACACGACAATTATTTATGCAGAC
rJMSF027E20+          CAAAACGAACTGGACCGCCTTAGAGAACAGTATCCAGACACGACAATTATTTATGCAGAC
rJMSF019O14+          CAAAACGAACTGGACCGCCTTAGAGAACAGTATCCAGACACGNCAATTATTTATGCAGAC
rJMSF042D07+          CAAAACGAACTGGACCGCCTTAGAGAACAGTATCCAGACACGACAATTATTTATGCAGAC
                      ____________________________________________________________
consensus             CAAAACGAACTGGACCGCCTTAGAGAACAGTATCCAGACACGACAATTATTTATGCAGAC
 
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rJMSF013J04+          TACTATAACGCTGCAATGCGACTATATAACTCTCCAAGCAAATATGGATTTAAAAATACA
rJMSF027E20+          TACTATAACGCTGCAATGCGACTATATAACTCTCCAAGCAAATATGGATTTAAAAATACA
rJMSF019O14+          TACTATAACGCTGCAATGCGACTATATAACTCTCCNAGCAAATATGGATTTAAAAATACN
rJMSF042D07+          TACTATAACGCTGCAATGCGACTATATAACTCTCCAAGCAAATATGGATTTAAAAATACA
                      ____________________________________________________________
consensus             TACTATAACGCTGCAATGCGACTATATAACTCTCCAAGCAAATATGGATTTAAAAATACA
 
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rJMSF013J04+          GTGGTAGCGTGTTGTGGGGGTGGGGGCCCATACAATTACGACGGACTTGTAGATTGTGGG
rJMSF027E20+          GTGGTAGCGTGTTGTGGGGGTGGGGGCCCATACAATTACGACGGACTTGTAGATTGTGGG
rJMSF019O14+          GTGGTAGCGTGTTGTGGGGGTGGGGGCCCATACAATTACGACGGACTTGTAGATTGTGGG
rJMSF042D07+          GTGGTAGCGTGTTGTGGGGGTGGGGGCCCATACAATTACGACGGACTTGTAGATTGTGGG
                      ____________________________________________________________
consensus             GTGGTAGCGTGTTGTGGGGGTGGGGGCCCATACAATTACGACGGACTTGTAGATTGTGGG
 
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rJMSF013J04+          TCCGCATCATCAACGGTTTGCGATAACCCCTCATCGTATATTAGCTGGGATGGATCGCAC
rJMSF027E20+          TCCGCATCATCAACGGTTTGCGATAACCCCTCATCGTATATTAGCTGGGATGGATCGCAC
rJMSF019O14+          TCCGCATCATCAACGGTTTGCGATAACCCCTCATCGTATATTAGCTGGGATGGATCGCNC
rJMSF042D07+          TCCGCATCATCAACGGTTTGCGATAACCCCTCATCGTATATTAGCTGGGATGGATCGCAC
                      ____________________________________________________________
consensus             TCCGCATCATCAACGGTTTGCGATAACCCCTCATCGTATATTAGCTGGGATGGATCGCAC
 
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rJMSF013J04+          CTGACCGAAGCCGCTTATAAATGGATAGCTGATGGGCTTCTAAAGGGCCCATATACTACT
rJMSF027E20+          CTGACCGAAGCCGCTTATAAATGGATAGCTGATGGGCTTCTAAAGGGCCCATATACTACT
rJMSF019O14+          CTGACCGAAGCCGCTTATAAATGGATAGCTGATGGGCTTCTAAAGGGCCCATATACTACT
rJMSF042D07+          CTGACCGAAGCCGCTTATAAATGGATAGCTGATGGGCTTCTAAAGGGCCCATATACTACT
                      ____________________________________________________________
consensus             CTGACCGAAGCCGCTTATAAATGGATAGCTGATGGGCTTCTAAAGGGCCCATATACTACT
 
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rJMSF013J04+          CCACAAATCAATGGCGAATGCATTTTCAGGAGCCCAAAAACCAAACTTTCGGACTCTTAG
rJMSF027E20+          CCNCAAATCAATGGCGAATGCATTTTCAGGAGCCCAAAAACCAAAC-TTCGGACTNTTAG
rJMSF019O14+          CCNCAAATCAATGGCGAATGCATTTTCAGGAGCCCAAAAACCAAACTTTCGGACTNTTAG
rJMSF042D07+          CCACAAATCAATGGCGAATGCATTTTCAGGAGCCCAAAAACCAAACTTTCGGACTCTTAG
                      ____________________________________________________________
consensus             CCACAAATCAATGGCGAATGCATTTTCAGGAGCCCAAAAACCAAACTTTCGGACTCTTAG
 
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rJMSF013J04+          CTTCGGCCCAATATCTGCAGGGTTTGAGGCTGTGAGCAGCCC-TTTTGTAATTATTGGGC
rJMSF027E20+          CTTCGGCCCAATATNTGCAGGGTTTGAGGCTGTGAGCAGCCCNTTTTGTAATTATTGGGC
rJMSF019O14+          CTTCGGCCCAATATNTGCAGGGTTTGAGGCTGTGAGCAGCCCNTTTTGTAATTATTGGGC
rJMSF042D07+          CTTCGGCCCAATATCTGCAGGGTTTGAGGCTGTGAGCAGCCCATTTTGTAATTATTGGGC
                      ____________________________________________________________
consensus             CTTCGGCCCAATATCTGCAGGGTTTGAGGCTGTGAGCAGCCCATTTTGTAATTATTGGGC
 
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rJMSF013J04+          TTTAAATTGTTTGGCCCATATGCAACCAAGTTTGGTAGGCAATGTGTCAGTAAAACTGTA
rJMSF027E20+          TTTAAATTGTTTGGCCCATATGCAACCAAGTTTGGTAGGCAATGTGTCNGTAAAACTGTA
rJMSF019O14+          TTTAAATTGTTTGGCCCATATGCAACCAAGTTTGGTAGGCAATGTGTCNGTAAAACTGTA
rJMSF042D07+          TTTAAATTGTTTGGCCCATATGCAACCAAGTTTGGTAGGCAATGTGTCAGTAAAACTGTA
                      ____________________________________________________________
consensus             TTTAAATTGTTTGGCCCATATGCAACCAAGTTTGGTAGGCAATGTGTCAGTAAAACTGTA
 
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rJMSF013J04+          AAAATTTATTGTATCTCTATCATGTATGATATTGGTGCATGGATTTAGAAAATTTGGAAA
rJMSF027E20+          AAAATTTATTGTATCTCTATCATGTATGATATTGGTGCATGGATTTAGAAAATTTGGAAA
rJMSF019O14+          AAAATTTATTGTATCTCTATCATGTATGATATTGGTGCNTGGATTTAGAAAATTTGGAAA
rJMSF042D07+          AAAATTTATTGTATCTCTATCATGTATGATATTGGTGCATGGATTTAGAAAATTTGGAAA
                      ____________________________________________________________
consensus             AAAATTTATTGTATCTCTATCATGTATGATATTGGTGCATGGATTTAGAAAATTTGGAAA
 
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rJMSF013J04+          TCTCTGATCTATAGATTTTAGAGAT                                   
rJMSF027E20+          TCTCTGATCTATAGATTTTAGAGATTACAAATATTATTGTAANCATGTAAAAT       
rJMSF019O14+          TCTCTGATCNATAGATTTTAGAGATTACAAATATTATTGTAANCATGTAAAAT       
rJMSF042D07+          TCTCTGATCTATAGATTTTAGAGATTACAAATATTATTGTAANCATGTAAAATACCATGT
                      ____________________________________________________________
consensus             TCTCTGATCTATAGATTTTAGAGATTACAAATATTATTGTAANCATGTAAAATACCATGT