Contig 011395:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN031G24Sequence614011395 (2)ref|XP_009605059.1|2e-104PREDICTED: 3-ketoacyl-CoA synthase 6-like [Nicotiana tomentosiformis]
JMSF041M07Sequence740024256ref|XP_008339680.1|5e-80PREDICTED: 3-ketoacyl-CoA synthase 6 [Malus domestica]718011395 (2)ref|XP_009605059.1|8e-99PREDICTED: 3-ketoacyl-CoA synthase 6-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFN031G24-                                                     GAGGATGAAGAAGGGTTC
                      ____________________________________________________________
consensus                                                       GAGGATGAAGAAGGGTTC
 
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JMFN031G24-           GTGGGAATAAATTTGTGCATAAACCTTATGCAAGTGGCGGGTGATGCATTGAAGTCAAAC
rJMSF041M07+            GGGAATAAANTTGTGCATAAACCTTATTCAAGTGGCGGGTGATGCATTGAAGTCAAAC
                      ____________________________________________________________
consensus             GTGGGAATAAATTTGTGCATAAACCTTATTCAAGTGGCGGGTGATGCATTGAAGTCAAAC
 
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JMFN031G24-           ATAACAACCATAGGTCCTCTTGTTCTACCAGTATCCGAGCAAATCAAGTTTGTTCTAGCA
rJMSF041M07+          ATAACAACCATAGGTCCTCTTGTTCTACCAGTATCCGAGCAAATCAAGTTTGTTCTAGCA
                      ____________________________________________________________
consensus             ATAACAACCATAGGTCCTCTTGTTCTACCAGTATCCGAGCAAATCAAGTTTGTTCTAGCA
 
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JMFN031G24-           CTCATTGCTCGCAAGATCTCCAAATCAAAATCTGGATTCATCAAACCCTACGTCCCCAAC
rJMSF041M07+          CTCATTGCTCGCAAGATCTCCAAATCAAAATCTGGATTCATCAAACCCTACGTCCCCAAC
                      ____________________________________________________________
consensus             CTCATTGCTCGCAAGATCTCCAAATCAAAATCTGGATTCATCAAACCCTACGTCCCCAAC
 
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JMFN031G24-           TTCAAACGAGCGTTCGATCACTTCTGCATCCACGCTGGTGGGCGGGCTGTGATAGACGAA
rJMSF041M07+          TTCAAACGAGCGTTCGATCACTTCTGCATCCACGCTGGTGGGCGGGCTGTGATAGACGAA
                      ____________________________________________________________
consensus             TTCAAACGAGCGTTCGATCACTTCTGCATCCACGCTGGTGGGCGGGCTGTGATAGACGAA
 
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JMFN031G24-           CTGCAGAAAAGTCTAGACCTCTCGGCTGAGCACGTAGAGGCGTCTCGAATGACGTTACAC
rJMSF041M07+          CTGCAGAAAAGTCTAGACCTCTCGGCTGAGCACGTAGAGGCGTCTCGAATGACGTTACAC
                      ____________________________________________________________
consensus             CTGCAGAAAAGTCTAGACCTCTCGGCTGAGCACGTAGAGGCGTCTCGAATGACGTTACAC
 
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JMFN031G24-           CGGTTTGGGAACACGTCGTCGTCGTCTTTATGGTACGAGATGAGTTACATTGAGGCTAAG
rJMSF041M07+          CGGTTTGGGAACACGTCGTCGTCGTCTTTATGGTACGAGATGAGTTACATTGAGGCTAAG
                      ____________________________________________________________
consensus             CGGTTTGGGAACACGTCGTCGTCGTCTTTATGGTACGAGATGAGTTACATTGAGGCTAAG
 
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JMFN031G24-           GGGAGAATGAAGAAAGGGGATAGGGTGTGGCAAATTGCGTTCGGGAGTGGATTCAAATGT
rJMSF041M07+          GGGAGAATGAAGAAAGGGGATAGGGTGTGGCAAATTGCGTTCGGGAGTGGATTCAAATGT
                      ____________________________________________________________
consensus             GGGAGAATGAAGAAAGGGGATAGGGTGTGGCAAATTGCGTTCGGGAGTGGATTCAAATGT
 
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JMFN031G24-           AACAGTGCAGTTTGGAAGTGTAACAGGAGCATTAAGGCACCAGTAGCGGATAGTCCATGG
rJMSF041M07+          AACAGTGCAGTTTGGAAGTGTAACAGGAGCATTAAGGCACCAGTAGCGGATAGTCCATGG
                      ____________________________________________________________
consensus             AACAGTGCAGTTTGGAAGTGTAACAGGAGCATTAAGGCACCAGTAGCGGATAGTCCATGG
 
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JMFN031G24-           GCTGATTGTATTCATCAATATCCAGTTCATATTCCTGAAGTCCTCAAGCTATAATTTACT
rJMSF041M07+          GCTGATTGTATTCATCAATATCCAGTTCATATTCCTGAAGTCCTCAAGCTATAATTTACT
                      ____________________________________________________________
consensus             GCTGATTGTATTCATCAATATCCAGTTCATATTCCTGAAGTCCTCAAGCTATAATTTACT
 
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JMFN031G24-           CCCCTGCTCCGATCCCTATCCTAGCTTGCGCGTGGCTCTACCTTATTTAATTACCT    
rJMSF041M07+          CCCCTGCTCCGATCCCTATCCTAGCTTGCGCGTGGCTCTACCTTATTTAATTACCTAAAA
                      ____________________________________________________________
consensus             CCCCTGCTCCGATCCCTATCCTAGCTTGCGCGTGGCTCTACCTTATTTAATTACCTAAAA
 
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rJMSF041M07+          AACCCGCCGTCTTCGATCATCTATCTCATCTCATCTTCTGTTCCGTTCTTCTATTCCTAT
                      ____________________________________________________________
consensus             AACCCGCCGTCTTCGATCATCTATCTCATCTCATCTTCTGTTCCGTTCTTCTATTCCTAT
 
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rJMSF041M07+          TCCTATTCCTGTTCTTAATTATTTTGCACGCTTGCTTTGATATGATATGATTGATGTCGT
                      ____________________________________________________________
consensus             TCCTATTCCTGTTCTTAATTATTTTGCACGCTTGCTTTGATATGATATGATTGATGTCGT