Contig 011393:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031E11Sequence661013179 (9)gb|EYU39437.1|2e-106hypothetical protein MIMGU_mgv1a0012202mg, partial [Erythranthe guttata] gb|EYU685011393 (2)ref|XP_009776492.1|2e-78PREDICTED: coatomer subunit beta-1-like [Nicotiana sylvestris]
JMSF041B02Sequence646013179 (9)gb|EYU39437.1|1e-102hypothetical protein MIMGU_mgv1a0012202mg, partial [Erythranthe guttata] gb|EYU188011393 (2)

Alignment

This contig is upended


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rJMSF031E11+                                                               TCATTTT
                      ____________________________________________________________
consensus                                                                  TCATTTT
 
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rJMSF031E11+          TGGCAACNTTGTATATGAGACTTCAAATGTGCTTGAGCGCNCTGTTGTTGTGCTAAACGA
                      ____________________________________________________________
consensus             TGGCAACNTTGTATATGAGACTTCAAATGTGCTTGAGCGCNCTGTTGTTGTGCTAAACGA
 
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rJMSF031E11+          CATTCATATTGACATCATGGATTATATCTCCCCTGCAGTGTGCAGTGATGCTGCTTTTAG
                      ____________________________________________________________
consensus             CATTCATATTGACATCATGGATTATATCTCCCCTGCAGTGTGCAGTGATGCTGCTTTTAG
 
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rJMSF031E11+          AACTATGTGGGCAGAATTTGAGTGGGAGAACAAGGTTGCTGTCAATACTGTCNTTCAAGA
                      ____________________________________________________________
consensus             AACTATGTGGGCAGAATTTGAGTGGGAGAACAAGGTTGCTGTCAATACTGTCNTTCAAGA
 
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rJMSF031E11+          CGAGAAAGAATTTNTGGNCCNTATTATCAAATCAACCNATATGAAGTGCTTGACGGCTCT
                      ____________________________________________________________
consensus             CGAGAAAGAATTTNTGGNCCNTATTATCAAATCAACCNATATGAAGTGCTTGACGGCTCT
 
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rJMSF031E11+          ATNTGCNCTGGAGGGNGAATGTGGATTCCTAGCTGCTAACTTGTATGCCNAGAGTGTGTT
                      ____________________________________________________________
consensus             ATNTGCNCTGGAGGGNGAATGTGGATTCCTAGCTGCTAACTTGTATGCCNAGAGTGTGTT
 
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rJMSF031E11+          TGGGGAGGATGCTTTGGTGAATGTGAGCNTTGAGAAACNAGCNGATGGTAAGCTGAGTGG
                      ____________________________________________________________
consensus             TGGGGAGGATGCTTTGGTGAATGTGAGCNTTGAGAAACNAGCNGATGGTAAGCTGAGTGG
 
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rJMSF031E11+          TTATATTAGGATAAGGAGCAAAACTCAAGGAATTGCTCTCAGCTTGGGGGACAAAATCNC
                      ____________________________________________________________
consensus             TTATATTAGGATAAGGAGCAAAACTCAAGGAATTGCTCTCAGCTTGGGGGACAAAATCNC
 
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rJMSF031E11+          TCTCAAGCNGAAAGGTGGCAGCTGATCCNGTAAACNCAATGTTAGAGTCNGTGAATTATT
                      ____________________________________________________________
consensus             TCTCAAGCNGAAAGGTGGCAGCTGATCCNGTAAACNCAATGTTAGAGTCNGTGAATTATT
 
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rJMSF031E11+          NTGATAGAAGAGGTGATTGTTGGTCTNTAAAATTAGCTCAGATATGATTTGCTGGGTTTT
                      ____________________________________________________________
consensus             NTGATAGAAGAGGTGATTGTTGGTCTNTAAAATTAGCTCAGATATGATTTGCTGGGTTTT
 
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rJMSF031E11+          AATTTGAGGCTTNTTCTGGTCTTCCGCTTGCAGCTCGGAAGGTGCTGGCAACTACTAAAA
                      ____________________________________________________________
consensus             AATTTGAGGCTTNTTCTGGTCTTCCGCTTGCAGCTCGGAAGGTGCTGGCAACTACTAAAA
 
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rJMSF031E11+          GAACCNGTAGAATTTTATTACNGCCNTTCTTCTTTTTTTTTTTCACATTTCAATTGGAGT
rJMSF041B02+                                          TTTTTTTTTTTCACATTTCAATTGGAGT
                      ____________________________________________________________
consensus             GAACCNGTAGAATTTTATTACNGCCNTTCTTCTTTTTTTTTTTCACATTTCAATTGGAGT
 
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rJMSF031E11+          CTTTTGCAGAAAATTTT                                           
rJMSF041B02+          CTTTTGCAGAAAATTTTTGTAGAGAAGACTNGAATATTTGATAGGAATACCTTTTCTTGC
                      ____________________________________________________________
consensus             CTTTTGCAGAAAATTTTTGTAGAGAAGACTNGAATATTTGATAGGAATACCTTTTCTTGC
 
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rJMSF041B02+          CTTTTGTTTGGTTTGACGTGTATAATCTTTATCCACTNAGAAGTACTGAGTTCTAATTGC
                      ____________________________________________________________
consensus             CTTTTGTTTGGTTTGACGTGTATAATCTTTATCCACTNAGAAGTACTGAGTTCTAATTGC