Contig 011386:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039H22Sequence664011386 (2)ref|XP_006347332.1|6e-102PREDICTED: ADP-ribosylation factor-like [Solanum tuberosum] ref|XP_010322497.1| 877011386 (2)ref|XP_006347564.1|2e-134PREDICTED: ADP-ribosylation factor-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF039H22-                                                 TAGTTTCAGACAGAGAGGAGAG
                      ____________________________________________________________
consensus                                                   TAGTTTCAGACAGAGAGGAGAG
 
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JMSF039H22-           AGAAACTTGGAATCAACGCTACCCTCTCTTCAGCACCGGCGTTCTCCGTCGGAGAATTTT
                      ____________________________________________________________
consensus             AGAAACTTGGAATCAACGCTACCCTCTCTTCAGCACCGGCGTTCTCCGTCGGAGAATTTT
 
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JMSF039H22-           CAACTCGATCGTCGACTTCTTGTTCTGGATCACTCACTCTTGCAGTAGCGGAGCTTGTCT
                      ____________________________________________________________
consensus             CAACTCGATCGTCGACTTCTTGTTCTGGATCACTCACTCTTGCAGTAGCGGAGCTTGTCT
 
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JMSF039H22-           CTCCGATCGCTGATTGCTTTTTCCTCTCCAATTCCATCTGATTCGCGAGGGCGTTAGAGA
                      ____________________________________________________________
consensus             CTCCGATCGCTGATTGCTTTTTCCTCTCCAATTCCATCTGATTCGCGAGGGCGTTAGAGA
 
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JMSF039H22-           ATAGAGAAGAACAGATGGGACAAACTTTCCGCAAGCTCTTTGATACCTTCTTCGGCAACA
rJMSF039H22+                                    TTCCGCAAGCTCTTTGATACCTTCTTCGGCAACA
                      ____________________________________________________________
consensus             ATAGAGAAGAACAGATGGGACAAACTTTCCGCAAGCTCTTTGATACCTTCTTCGGCAACA
 
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JMSF039H22-           GCGAGATGAGGGTTGTGATGCTTGGGCTTGATGCAGCTGGCAAAACAACCATACTGTATA
rJMSF039H22+          GCGAGATGAGGGTTGTGATGCTTGGGCTTGATGCAGCTGGCAAAACAACCATACTGTATA
                      ____________________________________________________________
consensus             GCGAGATGAGGGTTGTGATGCTTGGGCTTGATGCAGCTGGCAAAACAACCATACTGTATA
 
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JMSF039H22-           AACTGCACATAGGAGAAGTTCTATCAACAGTTCCTACCATTGGTTTCAATGTGGAAAAGG
rJMSF039H22+          AACTGCACATAGGAGAAGTTCTATCAACAGTTCCTACCATTGGTTTCAATGTGGAAAAGG
                      ____________________________________________________________
consensus             AACTGCACATAGGAGAAGTTCTATCAACAGTTCCTACCATTGGTTTCAATGTGGAAAAGG
 
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JMSF039H22-           TGCAGTATAAGAATGTGATGTTCACTGTCTGGGATGTTGGTGGACAGGAGAAATTAAGGC
rJMSF039H22+          TGCAGTATAAGAATGTGATGTTCACTGTCTGGGATGTTGGTGGACAGGAGAAATTAAGGC
                      ____________________________________________________________
consensus             TGCAGTATAAGAATGTGATGTTCACTGTCTGGGATGTTGGTGGACAGGAGAAATTAAGGC
 
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JMSF039H22-           CACTCTGGAGGCATTACTTCAACAACACAGATGGACTGATATATGTTGTTGATTCTTTGG
rJMSF039H22+          CACTCTGGAGGCATTACTTCAACAACACAGATGGACTGATATATGTTGTTGATTCTTTGG
                      ____________________________________________________________
consensus             CACTCTGGAGGCATTACTTCAACAACACAGATGGACTGATATATGTTGTTGATTCTTTGG
 
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JMSF039H22-           ACCGAGAGAGAATTGGAAAGGCCAAACAAGAGTTTCAGGCCATCATCAGAGATCCTTTTA
rJMSF039H22+          ACCGAGAGAGAATTGGAAAGGCCAAACAAGAGTTTCAGGCCATCATCAGAGATCCTTTTA
                      ____________________________________________________________
consensus             ACCGAGAGAGAATTGGAAAGGCCAAACAAGAGTTTCAGGCCATCATCAGAGATCCTTTTA
 
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JMSF039H22-           TGCTTAATGCAGTCATCTTGGTTTTTGCTAACAAACAGGACATGAAAGGGGCAATGACTC
rJMSF039H22+          TGCTTAATGCAGTCATCTTGGTTTTTGCTAACAAACAGGACATGAAAGGGGCAATGACTC
                      ____________________________________________________________
consensus             TGCTTAATGCAGTCATCTTGGTTTTTGCTAACAAACAGGACATGAAAGGGGCAATGACTC
 
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JMSF039H22-           CNATGGAAGTTTGTGAAGGCCTTGG                                   
rJMSF039H22+          CAATGGAAGTTTGTGAAGGCCTTGGTCTCTATGACCTTAGGAACAGAAAATGGCATATAC
                      ____________________________________________________________
consensus             CAATGGAAGTTTGTGAAGGCCTTGGTCTCTATGACCTTAGGAACAGAAAATGGCATATAC
 
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rJMSF039H22+          AAGGGACATGTGCCGTCAGAGGGGATGGACTTTATGAGGGACTGGACTGGTTGGCAAGTA
                      ____________________________________________________________
consensus             AAGGGACATGTGCCGTCAGAGGGGATGGACTTTATGAGGGACTGGACTGGTTGGCAAGTA
 
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rJMSF039H22+          CACTGAAGGAGCACAAGGCTGCTGGGTTCTCCTCAGTAGGCCCTTCAACATTTTGATTCG
                      ____________________________________________________________
consensus             CACTGAAGGAGCACAAGGCTGCTGGGTTCTCCTCAGTAGGCCCTTCAACATTTTGATTCG
 
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rJMSF039H22+          TCAGGTTTATTCAAGTTCCGGGTGACAAAAGCTGAGAACCACTGCAGTCTAAAAAAGTTT
                      ____________________________________________________________
consensus             TCAGGTTTATTCAAGTTCCGGGTGACAAAAGCTGAGAACCACTGCAGTCTAAAAAAGTTT
 
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rJMSF039H22+          TCCCTTATTTTACAATCTAATTTTGAATACTTGCTCCTAACATTCTTATTATGAATGTTT
                      ____________________________________________________________
consensus             TCCCTTATTTTACAATCTAATTTTGAATACTTGCTCCTAACATTCTTATTATGAATGTTT
 
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rJMSF039H22+          TGACTGTGTTGTGTATATTGGAAGATGGACCTTTTGATTGGTATCTGTTGGTTAGGGGAT
                      ____________________________________________________________
consensus             TGACTGTGTTGTGTATATTGGAAGATGGACCTTTTGATTGGTATCTGTTGGTTAGGGGAT