Contig 011386:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039H22Sequence664011386 (2)ref|XP_006347332.1|6e-102PREDICTED: ADP-ribosylation factor-like [Solanum tuberosum] ref|XP_010322497.1| 877011386 (2)ref|XP_006347564.1|2e-134PREDICTED: ADP-ribosylation factor-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF039H22- TAGTTTCAGACAGAGAGGAGAG
                      ____________________________________________________________
consensus TAGTTTCAGACAGAGAGGAGAG
 
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JMSF039H22- AGAAACTTGGAATCAACGCTACCCTCTCTTCAGCACCGGCGTTCTCCGTCGGAGAATTTT
                      ____________________________________________________________
consensus AGAAACTTGGAATCAACGCTACCCTCTCTTCAGCACCGGCGTTCTCCGTCGGAGAATTTT
 
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JMSF039H22- CAACTCGATCGTCGACTTCTTGTTCTGGATCACTCACTCTTGCAGTAGCGGAGCTTGTCT
                      ____________________________________________________________
consensus CAACTCGATCGTCGACTTCTTGTTCTGGATCACTCACTCTTGCAGTAGCGGAGCTTGTCT
 
. : . : . : . : . : . :
JMSF039H22- CTCCGATCGCTGATTGCTTTTTCCTCTCCAATTCCATCTGATTCGCGAGGGCGTTAGAGA
                      ____________________________________________________________
consensus CTCCGATCGCTGATTGCTTTTTCCTCTCCAATTCCATCTGATTCGCGAGGGCGTTAGAGA
 
. : . : . : . : . : . :
JMSF039H22- ATAGAGAAGAACAGATGGGACAAACTTTCCGCAAGCTCTTTGATACCTTCTTCGGCAACA
rJMSF039H22+ TTCCGCAAGCTCTTTGATACCTTCTTCGGCAACA
                      ____________________________________________________________
consensus ATAGAGAAGAACAGATGGGACAAACTTTCCGCAAGCTCTTTGATACCTTCTTCGGCAACA
 
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JMSF039H22- GCGAGATGAGGGTTGTGATGCTTGGGCTTGATGCAGCTGGCAAAACAACCATACTGTATA
rJMSF039H22+ GCGAGATGAGGGTTGTGATGCTTGGGCTTGATGCAGCTGGCAAAACAACCATACTGTATA
                      ____________________________________________________________
consensus GCGAGATGAGGGTTGTGATGCTTGGGCTTGATGCAGCTGGCAAAACAACCATACTGTATA
 
. : . : . : . : . : . :
JMSF039H22- AACTGCACATAGGAGAAGTTCTATCAACAGTTCCTACCATTGGTTTCAATGTGGAAAAGG
rJMSF039H22+ AACTGCACATAGGAGAAGTTCTATCAACAGTTCCTACCATTGGTTTCAATGTGGAAAAGG
                      ____________________________________________________________
consensus AACTGCACATAGGAGAAGTTCTATCAACAGTTCCTACCATTGGTTTCAATGTGGAAAAGG
 
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JMSF039H22- TGCAGTATAAGAATGTGATGTTCACTGTCTGGGATGTTGGTGGACAGGAGAAATTAAGGC
rJMSF039H22+ TGCAGTATAAGAATGTGATGTTCACTGTCTGGGATGTTGGTGGACAGGAGAAATTAAGGC
                      ____________________________________________________________
consensus TGCAGTATAAGAATGTGATGTTCACTGTCTGGGATGTTGGTGGACAGGAGAAATTAAGGC
 
. : . : . : . : . : . :
JMSF039H22- CACTCTGGAGGCATTACTTCAACAACACAGATGGACTGATATATGTTGTTGATTCTTTGG
rJMSF039H22+ CACTCTGGAGGCATTACTTCAACAACACAGATGGACTGATATATGTTGTTGATTCTTTGG
                      ____________________________________________________________
consensus CACTCTGGAGGCATTACTTCAACAACACAGATGGACTGATATATGTTGTTGATTCTTTGG
 
. : . : . : . : . : . :
JMSF039H22- ACCGAGAGAGAATTGGAAAGGCCAAACAAGAGTTTCAGGCCATCATCAGAGATCCTTTTA
rJMSF039H22+ ACCGAGAGAGAATTGGAAAGGCCAAACAAGAGTTTCAGGCCATCATCAGAGATCCTTTTA
                      ____________________________________________________________
consensus ACCGAGAGAGAATTGGAAAGGCCAAACAAGAGTTTCAGGCCATCATCAGAGATCCTTTTA
 
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JMSF039H22- TGCTTAATGCAGTCATCTTGGTTTTTGCTAACAAACAGGACATGAAAGGGGCAATGACTC
rJMSF039H22+ TGCTTAATGCAGTCATCTTGGTTTTTGCTAACAAACAGGACATGAAAGGGGCAATGACTC
                      ____________________________________________________________
consensus TGCTTAATGCAGTCATCTTGGTTTTTGCTAACAAACAGGACATGAAAGGGGCAATGACTC
 
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JMSF039H22- CNATGGAAGTTTGTGAAGGCCTTGG
rJMSF039H22+ CAATGGAAGTTTGTGAAGGCCTTGGTCTCTATGACCTTAGGAACAGAAAATGGCATATAC
                      ____________________________________________________________
consensus CAATGGAAGTTTGTGAAGGCCTTGGTCTCTATGACCTTAGGAACAGAAAATGGCATATAC
 
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rJMSF039H22+ AAGGGACATGTGCCGTCAGAGGGGATGGACTTTATGAGGGACTGGACTGGTTGGCAAGTA
                      ____________________________________________________________
consensus AAGGGACATGTGCCGTCAGAGGGGATGGACTTTATGAGGGACTGGACTGGTTGGCAAGTA
 
. : . : . : . : . : . :
rJMSF039H22+ CACTGAAGGAGCACAAGGCTGCTGGGTTCTCCTCAGTAGGCCCTTCAACATTTTGATTCG
                      ____________________________________________________________
consensus CACTGAAGGAGCACAAGGCTGCTGGGTTCTCCTCAGTAGGCCCTTCAACATTTTGATTCG
 
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rJMSF039H22+ TCAGGTTTATTCAAGTTCCGGGTGACAAAAGCTGAGAACCACTGCAGTCTAAAAAAGTTT
                      ____________________________________________________________
consensus TCAGGTTTATTCAAGTTCCGGGTGACAAAAGCTGAGAACCACTGCAGTCTAAAAAAGTTT
 
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rJMSF039H22+ TCCCTTATTTTACAATCTAATTTTGAATACTTGCTCCTAACATTCTTATTATGAATGTTT
                      ____________________________________________________________
consensus TCCCTTATTTTACAATCTAATTTTGAATACTTGCTCCTAACATTCTTATTATGAATGTTT
 
. : . : . : . : . : . :
rJMSF039H22+ TGACTGTGTTGTGTATATTGGAAGATGGACCTTTTGATTGGTATCTGTTGGTTAGGGGAT
                      ____________________________________________________________
consensus TGACTGTGTTGTGTATATTGGAAGATGGACCTTTTGATTGGTATCTGTTGGTTAGGGGAT