Contig 011384:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF038N23+                                                            TACAGAGATT
                      ____________________________________________________________
consensus                                                               TACAGAGATT
 
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rJMSF038N23+          GGTATTGGTGAAGACATGTACAACCCCTGTATCTGGCAATTTTTTTGCTCCTTTTCCTTG
                      ____________________________________________________________
consensus             GGTATTGGTGAAGACATGTACAACCCCTGTATCTGGCAATTTTTTTGCTCCTTTTCCTTG
 
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rJMSF039N23+                                                      GTACTCACAGATGATG
rJMSF038N23+          TAATTGTTGGAGCTTGGTTGGGGTTTTGGGTGGTTCGCAAAGTTGTACTCACAGATGATG
                      ____________________________________________________________
consensus             TAATTGTTGGAGCTTGGTTGGGGTTTTGGGTGGTTCGCAAAGTTGTACTCACAGATGATG
 
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rJMSF039N23+          GATCAATTGATATGGGCGTATCTCATTTTATTGCTTGGGCGATACGAATTGTTGCCTCAG
rJMSF038N23+          GATCAATTGATATGGGCGTATCTCATTTTATTGCTTGGGCGATACGAATTGTTGCCTCAG
                      ____________________________________________________________
consensus             GATCAATTGATATGGGCGTATCTCATTTTATTGCTTGGGCGATACGAATTGTTGCCTCAG
 
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rJMSF039N23+          CTATGATTCTTCAGAGTACCGTAGACATTTTATTGTCTGCAGAGGCATTGGTATGTGGAA
rJMSF038N23+          CTATGATTCTTCAGAGTACCGTAGACATTTTATTGTCTGCAGAGGCATTGGTATGTGGAA
                      ____________________________________________________________
consensus             CTATGATTCTTCAGAGTACCGTAGACATTTTATTGTCTGCAGAGGCATTGGTATGTGGAA
 
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rJMSF039N23+          TTTTGGTCTCATCAATATTGAGAAGAATATGTCATCTCAAATTTATACGCTTGATATACA
rJMSF038N23+          TTTTGGTCTCATCAATATTGAGAAGAATATGTCATCTCAAATTTATACGCTTGATATACA
                      ____________________________________________________________
consensus             TTTTGGTCTCATCAATATTGAGAAGAATATGTCATCTCAAATTTATACGCTTGATATACA
 
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rJMSF039N23+          AGAAATCATCAAGAATGATTGGGAACATCTGTGAAATATTATTGGATCTGTTTACACCAG
rJMSF038N23+          AGAAATCATCAAGAATGATTGGGAACATCTGTGAAATATTATTGGATCTGTTTACACCAG
                      ____________________________________________________________
consensus             AGAAATCATCAAGAATGATTGGGAACATCTGTGAAATATTATTGGATCTGTTTACACCAG
 
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rJMSF039N23+          AATACAAGGAGTCATATCCTAGACCTCCAAGCAATGGTACTTACCAAGGTTCAACCAGCA
rJMSF038N23+          AATACAAGGAGTCATATCCTAGACCTCCAAGCAATGGTACTTACCAAGGTTCAACCAGCA
                      ____________________________________________________________
consensus             AATACAAGGAGTCATATCCTAGACCTCCAAGCAATGGTACTTACCAAGGTTCAACCAGCA
 
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rJMSF039N23+          AGTCACCAAAACCTTTGTCAGATTCAGATACATTCTACTCTTCATACCACAAAACTCCAG
rJMSF038N23+          AGTCACCAAAACCTTTGTCAGATTCAGATACATTCTACTCTTCATACCACAAAACTCCAG
                      ____________________________________________________________
consensus             AGTCACCAAAACCTTTGTCAGATTCAGATACATTCTACTCTTCATACCACAAAACTCCAG
 
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rJMSF039N23+          AACGAAGAAAAATCTCAAAGGAGGATTTGGAAAAACTCACACAACAGACCACAAAGAAGG
rJMSF038N23+          AACGAAGAAAAATCTCAAAGGAGGATTTGGAAAAACTCACACAACAGACCACAAAGAAGG
                      ____________________________________________________________
consensus             AACGAAGAAAAATCTCAAAGGAGGATTTGGAAAAACTCACACAACAGACCACAAAGAAGG
 
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rJMSF039N23+          CCATGGAAGAGCTGGTTGCTTCCCCAGATTTCAGTAAATGGGCTGTTGCTCATGCAGACA
rJMSF038N23+          CCATGGAAGAGCTGGTTGCTTCCCCAGATTTCAGTAAATGGGCTGTTGCTCATGCAGACA
                      ____________________________________________________________
consensus             CCATGGAAGAGCTGGTTGCTTCCCCAGATTTCAGTAAATGGGCTGTTGCTCATGCAGACA
 
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rJMSF039N23+          GGATTACTTTGGCACCCAAAAAAGCTACACCTGATAGGCAGCGAAGGTGGTACAATTGGT
rJMSF038N23+          GGATTACTTTGGCACCCAAAAAAGCTACACCTGATAGGCAGCGAAGGTGGTACAATTGGT
                      ____________________________________________________________
consensus             GGATTACTTTGGCACCCAAAAAAGCTACACCTGATAGGCAGCGAAGGTGGTACAATTGGT
 
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rJMSF039N23+          CTTAAAGCAATTAATGTCGAATTCATATTTCCATCAGATTTGTTGTAA-NCAATGTTGGG
rJMSF038N23+          CTTAAAGCAATTAATGTCGAATTCATATTTCCATCAGATTTGTTGTAANNCAATGTTGGG
                      ____________________________________________________________
consensus             CTTAAAGCAATTAATGTCGAATTCATATTTCCATCAGATTTGTTGTAANNCAATGTTGGG
 
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rJMSF039N23+          GCCTTGTGCATTTCT                                             
rJMSF038N23+          GCCTTGTGCATTTCTATGTCAACAATGTTGTATAATATACAAATATACAACTGTCTTTGA
                      ____________________________________________________________
consensus             GCCTTGTGCATTTCTATGTCAACAATGTTGTATAATATACAAATATACAACTGTCTTTGA
 
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rJMSF038N23+          CTGAAATCTAACTAGGATAGTATCATCAACGTAGTAGATTGTAACTGTGGCGACGATGAT
                      ____________________________________________________________
consensus             CTGAAATCTAACTAGGATAGTATCATCAACGTAGTAGATTGTAACTGTGGCGACGATGAT