Contig 011381:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF038C21-                                                                  GGTTC
rJMSF038C21+                                                                 GGTTC
                      ____________________________________________________________
consensus                                                                    GGTTC
 
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JMSF038C21-           AAGAAACCTACGCTAGTCTTGCAGCTGTACGAGGAAAAGCCGAAACCCTAGGGTTCTTCG
rJMSF038C21+          AAGAAACCTACGCTAGTCTTGCAGCTGTACGAGGAAAAGCCGAAACCCTAGGGTTCTTCG
                      ____________________________________________________________
consensus             AAGAAACCTACGCTAGTCTTGCAGCTGTACGAGGAAAAGCCGAAACCCTAGGGTTCTTCG
 
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JMSF038C21-           ATTTAGTCTACAAAATGGGGGATGGGTTGAAGAATTTCGACGTAGAGAAGCTCATGTTGT
rJMSF038C21+          ATTTAGTCTACAAAATGGGGGATGGGTTGAAGAATTTCGACGTAGAGAAGCTCATGTTGT
                      ____________________________________________________________
consensus             ATTTAGTCTACAAAATGGGGGATGGGTTGAAGAATTTCGACGTAGAGAAGCTCATGTTGT
 
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JMSF038C21-           GGAGCAACGACCTCGTTGAGGTCTTGAAGGATGGCGAAGATGTCAATTCTTTGAAGCAGC
rJMSF038C21+          GGAGCAACGACCTCGTTGAGGTCTTGAAGGATGGCGAAGATGTCAATTCTTTGAAGCAGC
                      ____________________________________________________________
consensus             GGAGCAACGACCTCGTTGAGGTCTTGAAGGATGGCGAAGATGTCAATTCTTTGAAGCAGC
 
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JMSF038C21-           TATTGGAGCAATCTAACTCCCTTCAATCTCAGTGCAATACTGATTTTAACAACACCCAGA
rJMSF038C21+          TATTGGAGCAATCTAACTCCCTTCAATCTCAGTGCAATACTGATTTTAACAACACCCAGA
                      ____________________________________________________________
consensus             TATTGGAGCAATCTAACTCCCTTCAATCTCAGTGCAATACTGATTTTAACAACACCCAGA
 
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JMSF038C21-           GGTCCATCGAAGATTATGAAAAGAAGGTAGATATGTGCAAACGTAAAACCCTGGAAGCAA
rJMSF038C21+          GGTCCATCGAAGATTATGAAAAGAAGGTAGATATGTGCAAACGTAAAACCCTGGAAGCAA
                      ____________________________________________________________
consensus             GGTCCATCGAAGATTATGAAAAGAAGGTAGATATGTGCAAACGTAAAACCCTGGAAGCAA
 
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JMSF038C21-           AATCTGAAGCTTCAACTGATGCTGAAATAGAATCACTACAGAAAGATCTTGAAGAGGAGC
rJMSF038C21+          AATCTGAAGCTTCAACTGATGCTGAAATAGAATCACTACAGAAAGATCTTGAAGAGGAGC
                      ____________________________________________________________
consensus             AATCTGAAGCTTCAACTGATGCTGAAATAGAATCACTACAGAAAGATCTTGAAGAGGAGC
 
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JMSF038C21-           TTCAAAGAGAGAGCCTGTTAAGAGAAGAGCTGAGGGTTATTGCAGAAGAAATGAATGATT
rJMSF038C21+          TTCAAAGAGAGAGCCTGTTAAGAGAAGAGCTGAGGGTTATTGCAGAAGAAATGAATGATT
                      ____________________________________________________________
consensus             TTCAAAGAGAGAGCCTGTTAAGAGAAGAGCTGAGGGTTATTGCAGAAGAAATGAATGATT
 
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JMSF038C21-           TAGAGCATCAAAGATTCTCCATTGAGGAACAAGGAAAATCCCTTAAGCAACTTGAGCGAG
rJMSF040O04+                 TCAAAGATTCTCCATTGGAGAACAAAGGAAATCCCTTAAGCAACTTGAGCGAG
rJMSF038C21+          TAGAGCATCAAAGATTCTCCATTGAGGAACAAGGAAAATCCCTTAAGCAACTTGAGCGAG
                      ____________________________________________________________
consensus             TAGAGCATCAAAGATTCTCCATTGAGGAACAAGGAAAATCCCTTAAGCAACTTGAGCGAG
 
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JMSF038C21-           ATGACTCAAGAGCAGAGATGAGGTTATCATTGTTTGCTTCAGTTACGAATATTATCCCAA
rJMSF040O04+          ATGACTCAAGAGCAGAGAGGATGTTATCATTGTTTGCTTCGGCTACAAATATTATACCAA
rJMSF038C21+          ATGACTCAAGAGCAGAGATGAGGTTATCATTGTTTGCTTCAGTTACGAATATTATCCCAA
                      ____________________________________________________________
consensus             ATGACTCAAGAGCAGAGATGAGGTTATCATTGTTTGCTTCAGTTACGAATATTATCCCAA
 
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JMSF038C21-           GCTTGGATGATCAATCAAAAATATCGGGCTATAAAGTTCAGAGAGATAAAAATGTGGTTG
rJMSF040O04+          GCTTGGATGATCAATCAAAGATATCTGGCTATATCGTTCAGAGAGATAAAAATGTGGTTG
rJMSF038C21+          GCTTGGATGATCAATCAAAAATATCGGGCTATAAAGTTCAGAGAGATAAAAATGTGGTTG
                      ____________________________________________________________
consensus             GCTTGGATGATCAATCAAAAATATCGGGCTATAAAGTTCAGAGAGATAAAAATGTGGTTG
 
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JMSF038C21-           AAGATTTTGACTTTGACCCAAAAGATATGTCCGAGTTT                      
rJMSF040O04+          AAGATTTTGACTTTGGTCCAAAAGATATGTCCGAGTTTGAAACGTGTAA           
rJMSF038C21+          AAGATTTTGACTTTGACCCAAAAGATATGTCCGAGTTTGAAACTTGTAACCGCATTTGGA
                      ____________________________________________________________
consensus             AAGATTTTGACTTTGACCCAAAAGATATGTCCGAGTTTGAAACTTGTAACCGCATTTGGA
 
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rJMSF038C21+          AGATGATTAACTTGGACACATTATAGTTTTGTGAGCACAATTCTGTCTAATGTTGTGTAC
                      ____________________________________________________________
consensus             AGATGATTAACTTGGACACATTATAGTTTTGTGAGCACAATTCTGTCTAATGTTGTGTAC