Contig 011378:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF037E03-                                                 ATACTCTGTTAGACTGAATTTT
JMSF020F06-                                              GGAATACTCTGTTAGACTGAATTTT
                      ____________________________________________________________
consensus                                                GGAATACTCTGTTAGACTGAATTTT
 
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JMSF037E03-           GTTAATCTCCACCGATAGCTATGGAAACAAAGAATGAGCTTCAAAATCCTCCTCAAATCA
JMSF020F06-           GTTAATCTCCACCGATAGCTATGGAAACAAAGAATGAGCTTCAAAATCCTCCTCAAATCA
                      ____________________________________________________________
consensus             GTTAATCTCCACCGATAGCTATGGAAACAAAGAATGAGCTTCAAAATCCTCCTCAAATCA
 
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JMSF037E03-           TGCATAAGCCCTCCATTCCATGGCGGACCCGCATATCCCTTTCCCTTGTCTCCGCCGTCA
JMSF020F06-           TGCATAAGCCCTCCATTCCATGGCGGACCCGCATATCCCTTTCCCTTGTCTCCGCCGTCA
                      ____________________________________________________________
consensus             TGCATAAGCCCTCCATTCCATGGCGGACCCGCATATCCCTTTCCCTTGTCTCCGCCGTCA
 
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JMSF037E03-           CCGACGCCTCTCGCCGCCAAAATGGCACCGTGAACCGCCGTCTCCTCAAGATATTCAGTA
JMSF020F06-           CCGACGCCTCTCGCCGCCAAAATGGCACCGTGAACCGCCGTCTCCTCAAGATATTCAGTA
                      ____________________________________________________________
consensus             CCGACGCCTCTCGCCGCCAAAATGGCACCGTGAACCGCCGTCTCCTCAAGATATTCAGTA
 
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JMSF037E03-           TCACTGTTCCCCCCAATAGCAACCCTGTCAACGGCGTCAAGTCCTCCGACGTCACCGTCG
JMSF020F06-           TCACTGTTCCCCCCAATAGCAACCCTGTCAACGGCGTCAAGTCCTCCGACGTCACCGTCG
                      ____________________________________________________________
consensus             TCACTGTTCCCCCCAATAGCAACCCTGTCAACGGCGTCAAGTCCTCCGACGTCACCGTCG
 
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JMSF037E03-           ACCCGGCCCGCAACCTCTGGTTCCGTGTCTTCATACCAACTGCCGACGAGGCGCGGAATT
JMSF020F06-           ACCCGGCCCGCAACCTCTGGTTCCGTGTCTTCATACCAACTGCCGACGAGGCGCGGAATT
                      ____________________________________________________________
consensus             ACCCGGCCCGCAACCTCTGGTTCCGTGTCTTCATACCAACTGCCGACGAGGCGCGGAATT
 
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JMSF037E03-           CCGCTTCCCTCCCCGTAATCGTCTTCTTCCACGGCGGCGGGTTCGTGTACCTCAGCGCCG
JMSF020F06-           CCGCTTCCCTCCCCGTAATCGTCTTCTTCCACGGCGGCGGGTTCGTGTACCTCAGCGCCG
                      ____________________________________________________________
consensus             CCGCTTCCCTCCCCGTAATCGTCTTCTTCCACGGCGGCGGGTTCGTGTACCTCAGCGCCG
 
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JMSF037E03-           ACACCAAGGAGTACGATGCAGTTTGCCGCCGATTTGCGCGAAAAGTCCCGGCGGTCGTAG
JMSF020F06-           ACACCAAGGAGTACGATGCAGTTTGCCGCCGATTTGCGCGAAAAGTCCCGGCGGTCGTAG
                      ____________________________________________________________
consensus             ACACCAAGGAGTACGATGCAGTTTGCCGCCGATTTGCGCGAAAAGTCCCGGCGGTCGTAG
 
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JMSF037E03-           TTTCCGTTAACTATCGGCTGGCCCCGGAGCACCGCTACCCTGCTCAGTACGACGATGGAT
JMSF020F06-           TTTCCGTTAACTATCGGCTGGCCCCGGAGCACCGCTACCCTGCTCAGTACGACGATGGAT
rJMSF020F06+                                                            GACGATGGAT
                      ____________________________________________________________
consensus             TTTCCGTTAACTATCGGCTGGCCCCGGAGCACCGCTACCCTGCTCAGTACGACGATGGAT
 
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JMSF037E03-           TCGACGTGCTCAGGTTCCTCGATGATGAGAACAACAATGGGATACTGCCAGAAAACGCTG
JMSF020F06-           TCGACGTGCTCAGGTTCCTCGATGATGAGAACAACAATGGGATACTGCCAGAAAACGCTG
rJMSF020F06+          TCGACGTGCTCAGGTTCCTCGATGATGAGAACAACAATGGGATACTGCCAGAAAACGCTG
                      ____________________________________________________________
consensus             TCGACGTGCTCAGGTTCCTCGATGATGAGAACAACAATGGGATACTGCCAGAAAACGCTG
 
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JMSF037E03-           ACGTGTCTCGCTGCTTTCTAGCCGGAGATAGTGCCGG                       
JMSF020F06-           ACGTGTCTCGCTGCTTTCTAGCCGGAGATAGTGCCGGAGGAAACCTGGCCCACCACGTGG
rJMSF020F06+          ACGTGTCTCGCTGCTTTCTAGCCGGAGATAGTGCCGGAGGAAACCTGGCCCACCACGTGG
                      ____________________________________________________________
consensus             ACGTGTCTCGCTGCTTTCTAGCCGGAGATAGTGCCGGAGGAAACCTGGCCCACCACGTGG
 
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JMSF020F06-           CAAAGCGAGCATCGGAATCCAGTTTCCGGCGGCTTAAGGTGGGTGGAGTAGTGGCAATAC
rJMSF020F06+          CAAAGCGAGCATCGGAATCCAGTTTCCGGCGGCTTAAGGTGGGTGGAGTAGTGGCAATAC
rJMSF037E03+                          ATCCAGTTTCCGGCGGCTTAAGGTGGGTGGAGTAGTGGCAATAC
                      ____________________________________________________________
consensus             CAAAGCGAGCATCGGAATCCAGTTTCCGGCGGCTTAAGGTGGGTGGAGTAGTGGCAATAC
 
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JMSF020F06-           AACCATTC                                                    
rJMSF020F06+          AACCATTCTTCGGAGGAGAAGAGCGGACGGAGGCAGAGAAGGAATTGCCAAAGTTCGATC
rJMSF037E03+          AACCATTCTTCGGAGGAGAAGAGCGGACGGAGGCAGAGAAGGAATTGCCAAAGTTCGATC
                      ____________________________________________________________
consensus             AACCATTCTTCGGAGGAGAAGAGCGGACGGAGGCAGAGAAGGAATTGCCAAAGTTCGATC
 
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rJMSF020F06+          ATCTAATATCAGTGGCCCGCACAGACTGGATGTGGAAATCGTTTCTACCGGCGGGGGAAG
rJMSF037E03+          ATCTAATATCAGTGGCCCGCACAGACTGGATGTGGAAATCGTTTCTACCGGCGGGGGAAG
                      ____________________________________________________________
consensus             ATCTAATATCAGTGGCCCGCACAGACTGGATGTGGAAATCGTTTCTACCGGCGGGGGAAG
 
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rJMSF020F06+          GAATGAACAGGGACCACCAAGTGATCAACGTCAGCGGCCCCCGCGCGGTTGACATATCCA
rJMSF037E03+          GAATGGACAGGGACCACCAAGTGATCAACGTCAGCGGCCCCCGCGCGGTTGACATATCCA
                      ____________________________________________________________
consensus             GAATGGACAGGGACCACCAAGTGATCAACGTCAGCGGCCCCCGCGCGGTTGACATATCCA
 
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rJMSF020F06+          AACTGGATTTTCCGCCCACGATCGTGCTGGTAGCGGCCTTTGATCCTCTCAAGGATTGGC
rJMSF037E03+          AACTGGATTTTCCGCCCACGATCGTGCTGGTAGCGGCCTTTGATCCTCTCAAGGATTGGC
                      ____________________________________________________________
consensus             AACTGGATTTTCCGCCCACGATCGTGCTGGTAGCGGCCTTTGATCCTCTCAAGGATTGGC
 
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rJMSF020F06+          AGAAGAAGTACTACCACTGGCTTAAGGCCTCAGGCAAAGAAGCTTACCTGGTTGAGTACC
rJMSF037E03+          AGAAGAAGTACTACCACTGGCTTAAGGCCTCAGGCAAAGAAGCTTACCTGGTTGAGTACC
                      ____________________________________________________________
consensus             AGAAGAAGTACTACCACTGGCTTAAGGCCTCAGGCAAAGAAGCTTACCTGGTTGAGTACC
 
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rJMSF020F06+          CAAACGTCGCTCATGCTTTCTACATTTTCCCTGAGGTCCCTGAATCTAAGCAGCTAATTG
rJMSF037E03+          CAAACGTCGCTCATGCTTTCTACATTTTCCCTGAGGTCCCTGAATCTAAGCAGCTAATTG
                      ____________________________________________________________
consensus             CAAACGTCGCTCATGCTTTCTACATTTTCCCTGAGGTCCCTGAATCTAAGCAGCTAATTG
 
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rJMSF020F06+          AGGAGGTTAAGGATTTCATTCATACCCACTGTTCCGCTCCAACCCCAAATAATAATTAAT
rJMSF037E03+          AGGAGGTTAAGGATTTCATTCATACCCACTGTTCCGCTCCAACCCCAAATAATAATTAAT
                      ____________________________________________________________
consensus             AGGAGGTTAAGGATTTCATTCATACCCACTGTTCCGCTCCAACCCCAAATAATAATTAAT
 
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rJMSF020F06+          TAAAAAACACCTGACTTAGCTGTTTGCGGTCACAATAAAATTGCATTATCAGTTTGCTTT
rJMSF037E03+          TAAAAAACACCTGACTTAGCTGTTTGCGGTCACAATAAAATTGCATTATCAGTTTGCTTT
                      ____________________________________________________________
consensus             TAAAAAACACCTGACTTAGCTGTTTGCGGTCACAATAAAATTGCATTATCAGTTTGCTTT
 
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rJMSF020F06+          CTTTTCCCGAATGTACAATGTGATGTGTAATCTTCCCTTTTTTTTTACTTATTACTATGA
rJMSF037E03+          CTTTTCCCGAATGTACAATGTGATGTGTAATCTTCCCTTTTTTTTTACTTATTACTATGA
                      ____________________________________________________________
consensus             CTTTTCCCGAATGTACAATGTGATGTGTAATCTTCCCTTTTTTTTTACTTATTACTATGA
 
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rJMSF020F06+          ACAATATCCCTTTTTT                                            
rJMSF037E03+          ACAATATCCCTTTTTTTACTTATTACTATTAACTATACCGTGCACCAAAGTGCACATTGC
                      ____________________________________________________________
consensus             ACAATATCCCTTTTTTTACTTATTACTATTAACTATACCGTGCACCAAAGTGCACATTGC
 
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rJMSF037E03+          ATTGTGCACTTTAAAAATTTGTGTATTATATTAAGAATTTATGTGTATTATATAAAAGTT
                      ____________________________________________________________
consensus             ATTGTGCACTTTAAAAATTTGTGTATTATATTAAGAATTTATGTGTATTATATAAAAGTT