Contig 011377:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF034M14+                     TCATTCATAGAGATTTAAAAGCTAGCACATNTTACTGGATAGCNACTGG
                      ____________________________________________________________
consensus                        TCATTCATAGAGATTTAAAAGCTAGCACATNTTACTGGATAGCNACTGG
 
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rJMSF034M14+          AACCAAAGATATCCGATTTGGGATAGCAAGATTCATGGGAGGGAATGAAATAGAAGCCAA
                      ____________________________________________________________
consensus             AACCAAAGATATCCGATTTGGGATAGCAAGATTCATGGGAGGGAATGAAATAGAAGCCAA
 
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rJMSF034M14+          GACACACAGAGTAGTAGGAACATATGGCTATATCGCTCCAGAATACGCATCACGTGGCCT
                      ____________________________________________________________
consensus             GACACACAGAGTAGTAGGAACATATGGCTATATCGCTCCAGAATACGCATCACGTGGCCT
 
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rJMSF034M14+          CTATTCAGTAAAGTCCGATGTATTTAGCTTCGGTGTCTTGGTATTGGAAATTATAAGTGG
                      ____________________________________________________________
consensus             CTATTCAGTAAAGTCCGATGTATTTAGCTTCGGTGTCTTGGTATTGGAAATTATAAGTGG
 
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rJMSF034M14+          GAAGAGGAATACAAAATTTACTAGTCCAGATGATGACATCAACCTTCTTGGATATGCATG
rJMSF037C06+                                                                 GCATG
                      ____________________________________________________________
consensus             GAAGAGGAATACAAAATTTACTAGTCCAGATGATGACATCAACCTTCTTGGATATGCATG
 
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rJMSF034M14+          GAAGCTGTATAGAGAAGGTAGATCAATGGAGTTGCTCGAGCCACATTTAAGCGACACACA
rJMSF037C06+          GAAGCTGTATAGAGAAGGTAGATCAATGGAGTTGCTCGAGCCACATTTAAGCGACACACA
                      ____________________________________________________________
consensus             GAAGCTGTATAGAGAAGGTAGATCAATGGAGTTGCTCGAGCCACATTTAAGCGACACACA
 
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rJMSF034M14+          TTCTCTTTCGATATCCGAAGTGTCCAGGTCGATTCATGTGGCTCTATTGTGCGTGCAACA
rJMSF037C06+          TTCTCTTTCGATATCCGAAGTGTCCAGGTCGATTCATGTGGCTCTATTGTGCGTGCAACA
                      ____________________________________________________________
consensus             TTCTCTTTCGATATCCGAAGTGTCCAGGTCGATTCATGTGGCTCTATTGTGCGTGCAACA
 
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rJMSF034M14+          ACGGCCAGAAGATAGGCCAAGCATGTCTTCCGTGATCCTAATGTTGAATAATGAAGGTGT
rJMSF037C06+          ACGGCCAGAAGATAGGCCAAGCATGTCTTCCGTGATCCTAATGTTGAATAATGAAGGTGT
                      ____________________________________________________________
consensus             ACGGCCAGAAGATAGGCCAAGCATGTCTTCCGTGATCCTAATGTTGAATAATGAAGGTGT
 
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rJMSF034M14+          CTTGCCCCCAGCTAAACAGCCAGGTTTTTTCACAGAAGGTGATGGTACCAACTGTTCTAG
rJMSF037C06+          CTTGCCCCCAGCTAAACAGCCAGGTTTTTTCACAGAAGGTGATGGTACCAACTGTTCTAG
                      ____________________________________________________________
consensus             CTTGCCCCCAGCTAAACAGCCAGGTTTTTTCACAGAAGGTGATGGTACCAACTGTTCTAG
 
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rJMSF034M14+          CAGAAATGACCTAAGATCAACAAACGAGATCACCATTACAAGCTTAGANCCGCGCTAGAA
rJMSF037C06+          CAGAAATGACCTAAGATCAACAAACGAGATCACCATTACAAGCTTAGAACCGCGCTAGAA
                      ____________________________________________________________
consensus             CAGAAATGACCTAAGATCAACAAACGAGATCACCATTACAAGCTTAGAACCGCGCTAGAA
 
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rJMSF034M14+          AGCGTCCATTGCAGATGAACACGGAAAATTTTGCCCCGTCTCAGTTTCGATTATTTACCA
rJMSF037C06+          AGCGTCCATTGCAGATGAACACGGAAAATTTTGCCCCGTCTCAGTTTCGATTATTTACCA
                      ____________________________________________________________
consensus             AGCGTCCATTGCAGATGAACACGGAAAATTTTGCCCCGTCTCAGTTTCGATTATTTACCA
 
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rJMSF034M14+          GGAATGAAGGTTGGGAAGAACCTGGGAAATGCAGCATCAACAAAAGTTCAAATATTGCAT
rJMSF037C06+          GGAATGAAGGTTGGGAAGAACCTGGGAAATGCAGCATCAACAAAAGTTCAAATATTGCAT
                      ____________________________________________________________
consensus             GGAATGAAGGTTGGGAAGAACCTGGGAAATGCAGCATCAACAAAAGTTCAAATATTGCAT
 
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rJMSF034M14+          TGATTTTTTNTTTGAGGAAGAAATATTGCATTAATTCTCATAGGAGCCGCTCGTGTGAGA
rJMSF037C06+          TGATTTTTTATTTGAGGAAGAAATATTGCATTAATTCTCATAGGAGCCGCTCGTGTGAGA
                      ____________________________________________________________
consensus             TGATTTTTTATTTGAGGAAGAAATATTGCATTAATTCTCATAGGAGCCGCTCGTGTGAGA
 
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rJMSF034M14+          TT                                                          
rJMSF037C06+          TTGTTTCATGTAAGAGAGGTGATAGAAATATATTATTACATTGATTGATTTAATTCTTAT
                      ____________________________________________________________
consensus             TTGTTTCATGTAAGAGAGGTGATAGAAATATATTATTACATTGATTGATTTAATTCTTAT
 
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rJMSF037C06+          AGGGAAAAAGGGTTAAATAAGTATTTAAATTTTATACCAGAAGTTAAATAGACCTTTGAA
                      ____________________________________________________________
consensus             AGGGAAAAAGGGTTAAATAAGTATTTAAATTTTATACCAGAAGTTAAATAGACCTTTGAA
 
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rJMSF037C06+          TTTTTAAAATTTTTAATTAAACTCATCATGGTGACAGACAATTTAAAACAACTCCATCTT
                      ____________________________________________________________
consensus             TTTTTAAAATTTTTAATTAAACTCATCATGGTGACAGACAATTTAAAACAACTCCATCTT